RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 CASTOR1Q8WTX7 329 aa12.07□□□□□ -0.48
RNF40-205ENST00000563909 MUC4Q99102 2169 aa12.07□□□□□ -0.48
RNF40-205ENST00000563909 KRTAP4-5Q9BYR2 181 aa12.07□□□□□ -0.48
RNF40-205ENST00000563909 FBXL15Q9H469 300 aa12.07□□□□□ -0.48
RNF40-205ENST00000563909 C5orf66Q9H5L9 145 aa12.07□□□□□ -0.48
RNF40-205ENST00000563909 PLEKHA2Q9HB19 425 aa12.07□□□□□ -0.48
RNF40-205ENST00000563909 IGHV7-81A0A0B4J1V7 117 aa12.06□□□□□ -0.48
RNF40-205ENST00000563909 TEX13DA0A0J9YY54 714 aaPredicted RBP12.06□□□□□ -0.48
RNF40-205ENST00000563909 C3orf85A0A1B0GTC6 90 aa12.06□□□□□ -0.48
RNF40-205ENST00000563909 HLA-DRB1P01911 266 aa12.06□□□□□ -0.48
RNF40-205ENST00000563909 HSPB1P04792 205 aaKnown RBP12.06□□□□□ -0.48
RNF40-205ENST00000563909 LPAR6P43657 344 aa12.06□□□□□ -0.48
RNF40-205ENST00000563909 TAS2R31P59538 309 aa12.06□□□□□ -0.48
RNF40-205ENST00000563909 MINDY2Q8NBR6 621 aa12.06□□□□□ -0.48
RNF40-205ENST00000563909 PLEKHA3Q9HB20 300 aa12.06□□□□□ -0.48
RNF40-205ENST00000563909 COMMD9Q9P000 198 aa12.06□□□□□ -0.48
RNF40-205ENST00000563909 CNIH1O95406 144 aa12.05□□□□□ -0.48
RNF40-205ENST00000563909 IGHV3-11P01762 117 aa12.05□□□□□ -0.48
RNF40-205ENST00000563909 SERPINE2P07093 398 aa12.05□□□□□ -0.48
RNF40-205ENST00000563909 CRYGBP07316 175 aa12.05□□□□□ -0.48
RNF40-205ENST00000563909 NQO2P16083 231 aa12.05□□□□□ -0.48
RNF40-205ENST00000563909 CCR6P51684 374 aa12.05□□□□□ -0.48
RNF40-205ENST00000563909 ZNF585BQ52M93 769 aa12.05□□□□□ -0.48
RNF40-205ENST00000563909 LGALS9CQ6DKI2 356 aa12.05□□□□□ -0.48
RNF40-205ENST00000563909 PPP1R27Q86WC6 154 aa12.05□□□□□ -0.48
RNF40-205ENST00000563909 NAA60Q9H7X0 242 aa12.05□□□□□ -0.48
RNF40-205ENST00000563909 KCNIP3Q9Y2W7 256 aa12.05□□□□□ -0.48
RNF40-205ENST00000563909 KLK5Q9Y337 293 aaPredicted RBP12.05□□□□□ -0.48
RNF40-205ENST00000563909 A0A1W2PN81 502 aa12.04□□□□□ -0.48
RNF40-205ENST00000563909 CRYM-AS1A6NIL9 109 aa12.04□□□□□ -0.48
RNF40-205ENST00000563909 CREBL2O60519 120 aaPredicted RBP12.04□□□□□ -0.48
RNF40-205ENST00000563909 OR2A4O95047 310 aa12.04□□□□□ -0.48
RNF40-205ENST00000563909 S1PR2O95136 353 aa12.04□□□□□ -0.48
RNF40-205ENST00000563909 NDUFB6O95139 128 aa12.04□□□□□ -0.48
RNF40-205ENST00000563909 SAA1P0DJI8 122 aaPredicted RBP12.04□□□□□ -0.48
RNF40-205ENST00000563909 RPA2P15927 270 aa12.04□□□□□ -0.48
RNF40-205ENST00000563909 CHRNA7P36544 502 aa12.04□□□□□ -0.48
RNF40-205ENST00000563909 ERVK-16P61578 105 aa12.04□□□□□ -0.48
RNF40-205ENST00000563909 POU2AF1Q16633 256 aa12.04□□□□□ -0.48
RNF40-205ENST00000563909 ECSCRQ19T08 205 aa12.04□□□□□ -0.48
RNF40-205ENST00000563909 MZT2BQ6NZ67 158 aa12.04□□□□□ -0.48
RNF40-205ENST00000563909 ZNF562Q6V9R5 426 aa12.04□□□□□ -0.48
RNF40-205ENST00000563909 RHOVQ96L33 236 aa12.04□□□□□ -0.48
RNF40-205ENST00000563909 OR2A7Q96R45 310 aa12.04□□□□□ -0.48
RNF40-205ENST00000563909 CLCC1Q96S66 551 aa12.04□□□□□ -0.48
RNF40-205ENST00000563909 TSC22D3Q99576 134 aa12.04□□□□□ -0.48
RNF40-205ENST00000563909 FCN1O00602 326 aa12.03□□□□□ -0.48
RNF40-205ENST00000563909 SOX15O60248 233 aa12.03□□□□□ -0.48
RNF40-205ENST00000563909 AKR1C4P17516 323 aa12.03□□□□□ -0.48
RNF40-205ENST00000563909 BTCP35070 178 aa12.03□□□□□ -0.48
RNF40-205ENST00000563909 CX3CL1P78423 397 aa12.03□□□□□ -0.48
RNF40-205ENST00000563909 DHODHQ02127 395 aa12.03□□□□□ -0.48
RNF40-205ENST00000563909 ASAH1Q13510 395 aa12.03□□□□□ -0.48
RNF40-205ENST00000563909 TMED4Q7Z7H5 227 aa12.03□□□□□ -0.48
RNF40-205ENST00000563909 MMD2Q8IY49 270 aa12.03□□□□□ -0.48
RNF40-205ENST00000563909 VKORC1L1Q8N0U8 176 aa12.03□□□□□ -0.48
RNF40-205ENST00000563909 PUSL1Q8N0Z8 303 aaKnown RBP12.03□□□□□ -0.48
RNF40-205ENST00000563909 CENPSQ8N2Z9 138 aa12.03□□□□□ -0.48
RNF40-205ENST00000563909 ADAD2Q8NCV1 583 aaKnown RBP12.03□□□□□ -0.48
RNF40-205ENST00000563909 DMBX1Q8NFW5 382 aa12.03□□□□□ -0.48
RNF40-205ENST00000563909 OR4A5Q8NH83 315 aa12.03□□□□□ -0.48
RNF40-205ENST00000563909 TMEM230Q96A57 120 aa12.03□□□□□ -0.48
RNF40-205ENST00000563909 TP53RKQ96S44 253 aa12.03□□□□□ -0.48
RNF40-205ENST00000563909 BET1LQ9NYM9 111 aa12.03□□□□□ -0.48
RNF40-205ENST00000563909 ARPC1BO15143 372 aaKnown RBP12.02□□□□□ -0.49
RNF40-205ENST00000563909 ATG12O94817 140 aa12.02□□□□□ -0.49
RNF40-205ENST00000563909 KBTBD11O94819 623 aa12.02□□□□□ -0.49
RNF40-205ENST00000563909 CA2P00918 260 aa12.02□□□□□ -0.49
RNF40-205ENST00000563909 ANXA3P12429 323 aa12.02□□□□□ -0.49
RNF40-205ENST00000563909 UCP1P25874 307 aa12.02□□□□□ -0.49
RNF40-205ENST00000563909 PRSS8Q16651 343 aa12.02□□□□□ -0.49
RNF40-205ENST00000563909 TRIM16LQ309B1 348 aa12.02□□□□□ -0.49
RNF40-205ENST00000563909 SP6Q3SY56 376 aa12.02□□□□□ -0.49
RNF40-205ENST00000563909 TMEM128Q5BJH2 165 aa12.02□□□□□ -0.49
RNF40-205ENST00000563909 SSX9Q7RTT3 188 aa12.02□□□□□ -0.49
RNF40-205ENST00000563909 CADM3Q8N126 398 aa12.02□□□□□ -0.49
RNF40-205ENST00000563909 TMEM167AQ8TBQ9 72 aa12.02□□□□□ -0.49
RNF40-205ENST00000563909 GALNT14Q96FL9 552 aa12.02□□□□□ -0.49
RNF40-205ENST00000563909 SIGLEC8Q9NYZ4 499 aa12.02□□□□□ -0.49
RNF40-205ENST00000563909 TBC1D24Q9ULP9 559 aa12.02□□□□□ -0.49
RNF40-205ENST00000563909 FOXA2Q9Y261 457 aaPredicted RBP12.02□□□□□ -0.49
RNF40-205ENST00000563909 FBXO7Q9Y3I1 522 aa12.02□□□□□ -0.49
RNF40-205ENST00000563909 HERC1Q15751 4861 aa12.02□□□□□ -0.49
RNF40-205ENST00000563909 FAM240BA0A1B0GVZ2 78 aa12.01□□□□□ -0.49
RNF40-205ENST00000563909 IZUMO1RA6ND01 250 aa12.01□□□□□ -0.49
RNF40-205ENST00000563909 MARCH11A6NNE9 402 aa12.01□□□□□ -0.49
RNF40-205ENST00000563909 ACTL6BO94805 426 aa12.01□□□□□ -0.49
RNF40-205ENST00000563909 KRASP01116 189 aa12.01□□□□□ -0.49
RNF40-205ENST00000563909 OR5AC1P0C628 307 aa12.01□□□□□ -0.49
RNF40-205ENST00000563909 DEFA1P59665 94 aa12.01□□□□□ -0.49
RNF40-205ENST00000563909 DEFA3P59666 94 aa12.01□□□□□ -0.49
RNF40-205ENST00000563909 CD81P60033 236 aa12.01□□□□□ -0.49
RNF40-205ENST00000563909 UBE2MP61081 183 aaKnown RBP12.01□□□□□ -0.49
RNF40-205ENST00000563909 IFITM3Q01628 133 aa12.01□□□□□ -0.49
RNF40-205ENST00000563909 FXYD3Q14802 87 aa12.01□□□□□ -0.49
RNF40-205ENST00000563909 C19orf54Q5BKX5 351 aa12.01□□□□□ -0.49
RNF40-205ENST00000563909 OR4A47Q6IF82 309 aa12.01□□□□□ -0.49
RNF40-205ENST00000563909 LCN12Q6JVE5 192 aa12.01□□□□□ -0.49
RNF40-205ENST00000563909 SLC25A42Q86VD7 318 aa12.01□□□□□ -0.49
RNF40-205ENST00000563909 TMEM222Q9H0R3 208 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms