RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 SLC24A4Q8NFF2 622 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 TMEM140Q9NV12 185 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 ZNF586Q9NXT0 402 aa9.82□□□□□ -0.84
ABCA3-203ENST00000563623 J3QW42 95 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 IL6RP08887 468 aaPredicted RBP9.81□□□□□ -0.84
ABCA3-203ENST00000563623 GATA2P23769 480 aaPredicted RBP9.81□□□□□ -0.84
ABCA3-203ENST00000563623 PDLIM4P50479 330 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 MMD2Q8IY49 270 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 ZNRF1Q8ND25 227 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 NBEAQ8NFP9 2946 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 GABRA6Q16445 453 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 ZNF718Q3SXZ3 478 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 ZNF766Q5HY98 468 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 PQLC2Q6ZP29 291 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 STPG3Q8N7X2 389 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 NHLRC2Q8NBF2 726 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 ST6GALNAC3Q8NDV1 305 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 ARRDC1-AS1Q9H2J1 176 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 NPVFQ9HCQ7 196 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 TMEM238LA0A1B0GVL6 79 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 NKX6-3A6NJ46 265 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 NPY1RP25929 384 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 HNRNPA3P51991 378 aaKnown RBP9.81□□□□□ -0.84
ABCA3-203ENST00000563623 FOXL1Q12952 345 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 TIGITQ495A1 244 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 KRTCAP3Q53RY4 240 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 WDR82Q6UXN9 313 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 Q6ZWC4 215 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 LYG1Q8N1E2 194 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 SPRR3Q9UBC9 169 aa9.81□□□□□ -0.84
ABCA3-203ENST00000563623 YLPM1P49750 1951 aaKnown RBP9.8□□□□□ -0.84
ABCA3-203ENST00000563623 TNRC6AQ8NDV7 1962 aaKnown RBP9.8□□□□□ -0.84
ABCA3-203ENST00000563623 ZNF253O75346 499 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 DUTP33316 252 aaKnown RBP9.8□□□□□ -0.84
ABCA3-203ENST00000563623 RANP62826 216 aaKnown RBP9.8□□□□□ -0.84
ABCA3-203ENST00000563623 TEPPQ6URK8 271 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 DHRS13Q6UX07 377 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 Q6ZN92 141 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 PPP1R35Q8TAP8 253 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 RNASE7Q9H1E1 156 aaKnown RBP9.8□□□□□ -0.84
ABCA3-203ENST00000563623 SPTA1P02549 2419 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 HELTA6NFD8 242 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 IQCF6A8MYZ5 107 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 IGFBP2P18065 325 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 OPRK1P41145 380 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 SUMO1P63165 101 aaKnown RBP9.8□□□□□ -0.84
ABCA3-203ENST00000563623 RNFT1Q5M7Z0 435 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 FAM201AQ5SY85 155 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 ASPHD1Q5U4P2 390 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 MIR17HGQ75NE6 70 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 ATOH7Q8N100 152 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 ZNF738Q8NE65 137 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 IL36BQ9NZH7 164 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 KMT2EQ8IZD2 1858 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 DIRC3C9JPN6 131 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 TNFSF15O95150 251 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 STAG3L2P0CL84 134 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 STAG3L3P0CL85 134 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 CD99P14209 185 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 GP6Q9HCN6 339 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 COL6A3P12111 3177 aa9.8□□□□□ -0.84
ABCA3-203ENST00000563623 POLEQ07864 2286 aa9.79□□□□□ -0.84
ABCA3-203ENST00000563623 MPDU1O75352 247 aa9.79□□□□□ -0.84
ABCA3-203ENST00000563623 ADH4P08319 380 aa9.79□□□□□ -0.84
ABCA3-203ENST00000563623 CCL11P51671 97 aa9.79□□□□□ -0.84
ABCA3-203ENST00000563623 EFNB3Q15768 340 aa9.79□□□□□ -0.84
ABCA3-203ENST00000563623 PRR31Q5SQ13 230 aa9.79□□□□□ -0.84
ABCA3-203ENST00000563623 TMPRSS2O15393 492 aa9.79□□□□□ -0.84
ABCA3-203ENST00000563623 SPRY3O43610 288 aa9.79□□□□□ -0.84
ABCA3-203ENST00000563623 WNT2P09544 360 aa9.79□□□□□ -0.84
ABCA3-203ENST00000563623 PAFAH1B2P68402 229 aa9.79□□□□□ -0.84
ABCA3-203ENST00000563623 CENPWQ5EE01 88 aa9.79□□□□□ -0.84
ABCA3-203ENST00000563623 PRR27Q6MZM9 219 aa9.79□□□□□ -0.84
ABCA3-203ENST00000563623 UNQ5815/PRO19632Q6UWF5 114 aa9.79□□□□□ -0.84
ABCA3-203ENST00000563623 FER1L6-AS2Q96M78 137 aa9.79□□□□□ -0.84
ABCA3-203ENST00000563623 MIEN1Q9BRT3 115 aa9.79□□□□□ -0.84
ABCA3-203ENST00000563623 CA2P00918 260 aa9.78□□□□□ -0.84
ABCA3-203ENST00000563623 TMEM144Q7Z5S9 345 aa9.78□□□□□ -0.84
ABCA3-203ENST00000563623 WFDC8Q8IUA0 241 aa9.78□□□□□ -0.84
ABCA3-203ENST00000563623 CD177Q8N6Q3 437 aa9.78□□□□□ -0.84
ABCA3-203ENST00000563623 TIMM8BQ9Y5J9 83 aaPredicted RBP9.78□□□□□ -0.84
ABCA3-203ENST00000563623 PLCE1Q9P212 2302 aa9.78□□□□□ -0.84
ABCA3-203ENST00000563623 GOSR1O95249 250 aa9.78□□□□□ -0.84
ABCA3-203ENST00000563623 P0C879 139 aa9.78□□□□□ -0.84
ABCA3-203ENST00000563623 MOB3BQ86TA1 216 aa9.78□□□□□ -0.84
ABCA3-203ENST00000563623 FAM19A2Q8N3H0 131 aa9.78□□□□□ -0.84
ABCA3-203ENST00000563623 PKDREJQ9NTG1 2253 aa9.78□□□□□ -0.84
ABCA3-203ENST00000563623 INTS1Q8N201 2190 aaKnown RBP9.78□□□□□ -0.84
ABCA3-203ENST00000563623 VWA1Q6PCB0 445 aa9.78□□□□□ -0.84
ABCA3-203ENST00000563623 MOGAT3Q86VF5 341 aa9.78□□□□□ -0.84
ABCA3-203ENST00000563623 TCTEX1D1Q8N7M0 179 aa9.78□□□□□ -0.84
ABCA3-203ENST00000563623 SSBP3Q9BWW4 388 aaPredicted RBP9.78□□□□□ -0.84
ABCA3-203ENST00000563623 NBASA2RRP1 2371 aa9.78□□□□□ -0.84
ABCA3-203ENST00000563623 GFRA3O60609 400 aa9.77□□□□□ -0.84
ABCA3-203ENST00000563623 SELENOTP62341 195 aa9.77□□□□□ -0.84
ABCA3-203ENST00000563623 STARD4Q96DR4 205 aa9.77□□□□□ -0.84
ABCA3-203ENST00000563623 GMPPAQ96IJ6 420 aaPredicted RBP9.77□□□□□ -0.84
ABCA3-203ENST00000563623 EAF1Q96JC9 268 aaPredicted RBP9.77□□□□□ -0.84
ABCA3-203ENST00000563623 WNT10AQ9GZT5 417 aa9.77□□□□□ -0.84
ABCA3-203ENST00000563623 TBL2Q9Y4P3 447 aaKnown RBP9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms