RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 OR4C46A6NHA9 309 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 C11orf86A6NJI1 115 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 SULT1B1O43704 296 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 ZNF189O75820 626 aaPredicted RBP0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 CNIH1O95406 144 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 SERPINA1P01009 418 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 IFNA10P01566 189 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 PRM2P04554 102 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 MSMBP08118 114 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 NFYAP23511 347 aaPredicted RBP0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 CA5AP35218 305 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 ZNF80P51504 273 aaPredicted RBP0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 FXYD2P54710 66 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 RELAQ04206 551 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 RPL18Q07020 188 aaKnown RBP0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 CDK10Q15131 360 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 GRK1Q15835 563 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 RPL22L1Q6P5R6 122 aaKnown RBP0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 SLC36A1Q7Z2H8 476 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 KRT222Q8N1A0 295 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 RPP25LQ8N5L8 163 aaKnown RBP0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 TBC1D19Q8N5T2 526 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 GDPD1Q8N9F7 314 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 OR52L1Q8NGH7 329 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 OR5J2Q8NH18 312 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 CT55Q8WUE5 264 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 SLC7A6Q92536 515 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 TOMM6Q96B49 74 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 MRPS24Q96EL2 167 aaKnown RBP0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 BTF3L4Q96K17 158 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 C2orf50Q96LR7 162 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 PPP1R2P1Q96PQ5 205 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 CMSS1Q9BQ75 279 aaKnown RBP0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 CCDC94Q9BW85 323 aaPredicted RBP0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 WDR61Q9GZS3 305 aaKnown RBP0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 EFCAB1Q9HAE3 211 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 CXorf21Q9HAI6 301 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 NMNAT1Q9HAN9 279 aaPredicted RBP0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 TMEM106BQ9NUM4 274 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 FBXL12Q9NXK8 326 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 HHLA3Q9XRX5 114 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 MINOS1-NBL1R4GNA1 71 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 PCF11O94913 1555 aaKnown RBP0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 TTC21AQ8NDW8 1320 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 ZNF532Q9HCE3 1301 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 ADAMTS7Q9UKP4 1686 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 ROBO3Q96MS0 1386 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 CCDC144AA2RUR9 1427 aa0.81□□□□□ -2.28
HMGB1P33-201ENST00000563485 MPDZO75970 2070 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 ADGRB3O60242 1522 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 KDM5BQ9UGL1 1544 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 SMARCA4P51532 1647 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 TRAV7A0A075B6U4 112 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 F8W036 122 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 LEPROTO15243 131 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 ZNF682O95780 498 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 IGHV3-7P01780 117 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 RBP1P09455 135 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 ZNF705DP0CH99 300 aaPredicted RBP0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 CSRP1P21291 193 aaKnown RBP0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 HIST1H2BOP23527 126 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 HIST1H2BBP33778 126 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 CSN1S1P47710 185 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 RAB13P51153 203 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 HIST1H2BDP58876 126 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 TPI1P60174 286 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 HSPE1P61604 102 aaKnown RBP0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 HIST1H2BCP62807 126 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 RPL30P62888 115 aaKnown RBP0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 FOXF1Q12946 379 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 HIST2H2BEQ16778 126 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 C12orf74Q32Q52 190 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 LIN52Q52LA3 116 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 DHRS4L2Q6PKH6 230 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 AGTRAPQ6RW13 159 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 Q6ZTI0 123 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 MSRB3Q8IXL7 192 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 SLC35F6Q8N357 371 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 PXT1Q8NFP0 134 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 OR11H6Q8NGC7 330 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 OR51D1Q8NGF3 324 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 OR10X1Q8NGY0 326 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 OR2T4Q8NH00 348 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 MCFD2Q8NI22 146 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 RASSF5Q8WWW0 418 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 HIST1H2BHQ93079 126 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 ERMAPQ96PL5 475 aaPredicted RBP0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 NMNAT3Q96T66 252 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 HIST1H2BNQ99877 126 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 HIST1H2BMQ99879 126 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 PRRT1Q99946 306 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 C9orf16Q9BUW7 83 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 CHST6Q9GZX3 395 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 CISHQ9NSE2 258 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 IL36BQ9NZH7 164 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 FUT9Q9Y231 359 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 PRELID3BQ9Y3B1 194 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 RBM7Q9Y580 266 aaKnown RBP0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 PLXNA3P51805 1871 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms