RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 DEFB113Q30KQ7 82 aa14.48□□□□□ -0.09
COMMD4-208ENST00000563220 SVBPQ8N300 66 aa14.48□□□□□ -0.09
COMMD4-208ENST00000563220 TEX45Q8NA69 505 aa14.48□□□□□ -0.09
COMMD4-208ENST00000563220 CLCC1Q96S66 551 aa14.48□□□□□ -0.09
COMMD4-208ENST00000563220 BEX4Q9NWD9 120 aaPredicted RBP14.48□□□□□ -0.09
COMMD4-208ENST00000563220 SVEP1Q4LDE5 3571 aa14.48□□□□□ -0.09
COMMD4-208ENST00000563220 ZNF705EA8MWA4 302 aaPredicted RBP14.48□□□□□ -0.09
COMMD4-208ENST00000563220 SEC11BP0C7V7 166 aa14.48□□□□□ -0.09
COMMD4-208ENST00000563220 CD24P25063 80 aa14.48□□□□□ -0.09
COMMD4-208ENST00000563220 FBLN7Q53RD9 439 aa14.48□□□□□ -0.09
COMMD4-208ENST00000563220 LILRB2Q8N423 598 aa14.48□□□□□ -0.09
COMMD4-208ENST00000563220 NDUFA4L2Q9NRX3 87 aa14.48□□□□□ -0.09
COMMD4-208ENST00000563220 HELZ2Q9BYK8 2649 aaKnown RBP14.47□□□□□ -0.09
COMMD4-208ENST00000563220 CENPVL3A0A0U1RRI6 287 aa14.47□□□□□ -0.09
COMMD4-208ENST00000563220 BLOC1S1P78537 153 aa14.47□□□□□ -0.09
COMMD4-208ENST00000563220 C10orf55Q5SWW7 151 aa14.47□□□□□ -0.09
COMMD4-208ENST00000563220 OR10P1Q8NGE3 313 aa14.47□□□□□ -0.09
COMMD4-208ENST00000563220 RNF5Q99942 180 aa14.47□□□□□ -0.09
COMMD4-208ENST00000563220 COMMD5Q9GZQ3 224 aa14.47□□□□□ -0.09
COMMD4-208ENST00000563220 PLEKHA3Q9HB20 300 aa14.47□□□□□ -0.09
COMMD4-208ENST00000563220 ENY2Q9NPA8 101 aa14.47□□□□□ -0.09
COMMD4-208ENST00000563220 TBL2Q9Y4P3 447 aaKnown RBP14.47□□□□□ -0.09
COMMD4-208ENST00000563220 ABCA12Q86UK0 2595 aa14.46□□□□□ -0.09
COMMD4-208ENST00000563220 CGB1A6NKQ9 187 aa14.46□□□□□ -0.09
COMMD4-208ENST00000563220 OOSP1A8MZH6 123 aa14.46□□□□□ -0.09
COMMD4-208ENST00000563220 IGKV1D-33P01593 117 aa14.46□□□□□ -0.09
COMMD4-208ENST00000563220 IGKV1-33P01594 117 aa14.46□□□□□ -0.09
COMMD4-208ENST00000563220 MSMBP08118 114 aa14.46□□□□□ -0.09
COMMD4-208ENST00000563220 F2RL1P55085 397 aa14.46□□□□□ -0.09
COMMD4-208ENST00000563220 RPP30P78346 268 aaKnown RBP14.46□□□□□ -0.09
COMMD4-208ENST00000563220 RUNX1Q01196 453 aa14.46□□□□□ -0.09
COMMD4-208ENST00000563220 HNF4GQ14541 408 aa14.46□□□□□ -0.09
COMMD4-208ENST00000563220 OR10W1Q8NGF6 305 aa14.46□□□□□ -0.09
COMMD4-208ENST00000563220 OR1L8Q8NGR8 309 aa14.46□□□□□ -0.09
COMMD4-208ENST00000563220 SIGLEC9Q9Y336 463 aa14.46□□□□□ -0.09
COMMD4-208ENST00000563220 A0A1B0GW64 132 aa14.46□□□□□ -0.1
COMMD4-208ENST00000563220 IFNA5P01569 189 aa14.46□□□□□ -0.1
COMMD4-208ENST00000563220 PRSS8Q16651 343 aa14.46□□□□□ -0.1
COMMD4-208ENST00000563220 CCDC144NLQ6NUI1 221 aa14.46□□□□□ -0.1
COMMD4-208ENST00000563220 PIP4P2Q8N4L2 257 aa14.46□□□□□ -0.1
COMMD4-208ENST00000563220 PARP11Q9NR21 331 aa14.46□□□□□ -0.1
COMMD4-208ENST00000563220 METTL1Q9UBP6 276 aaKnown RBP14.46□□□□□ -0.1
COMMD4-208ENST00000563220 NBPF19A0A087WUL8 3843 aa14.45□□□□□ -0.1
COMMD4-208ENST00000563220 OR8U8P0C7N1 319 aa14.45□□□□□ -0.1
COMMD4-208ENST00000563220 ADCYAP1P18509 176 aa14.45□□□□□ -0.1
COMMD4-208ENST00000563220 SAA4P35542 130 aa14.45□□□□□ -0.1
COMMD4-208ENST00000563220 ATP6V1FQ16864 119 aa14.45□□□□□ -0.1
COMMD4-208ENST00000563220 LRRC75BQ2VPJ9 315 aa14.45□□□□□ -0.1
COMMD4-208ENST00000563220 ETV3LQ6ZN32 361 aa14.45□□□□□ -0.1
COMMD4-208ENST00000563220 LRRC75A-AS1Q8N1F1 130 aa14.45□□□□□ -0.1
COMMD4-208ENST00000563220 SLC24A4Q8NFF2 622 aa14.45□□□□□ -0.1
COMMD4-208ENST00000563220 PINX1Q96BK5 328 aaKnown RBP14.45□□□□□ -0.1
COMMD4-208ENST00000563220 MALSU1Q96EH3 234 aa14.45□□□□□ -0.1
COMMD4-208ENST00000563220 EAF1Q96JC9 268 aaPredicted RBP14.45□□□□□ -0.1
COMMD4-208ENST00000563220 SEC11CQ9BY50 192 aa14.45□□□□□ -0.1
COMMD4-208ENST00000563220 FBXL15Q9H469 300 aa14.45□□□□□ -0.1
COMMD4-208ENST00000563220 MAP1AP78559 2803 aaPredicted RBP14.45□□□□□ -0.1
COMMD4-208ENST00000563220 B4DSR2 109 aa14.44□□□□□ -0.1
COMMD4-208ENST00000563220 PRSS46E5RG02 174 aa14.44□□□□□ -0.1
COMMD4-208ENST00000563220 NPFFO15130 113 aa14.44□□□□□ -0.1
COMMD4-208ENST00000563220 MOSP00540 346 aa14.44□□□□□ -0.1
COMMD4-208ENST00000563220 CA2P00918 260 aa14.44□□□□□ -0.1
COMMD4-208ENST00000563220 SNRNP70P08621 437 aaKnown RBP14.44□□□□□ -0.1
COMMD4-208ENST00000563220 FAM122CQ6P4D5 195 aa14.44□□□□□ -0.1
COMMD4-208ENST00000563220 BTNL8Q6UX41 500 aa14.44□□□□□ -0.1
COMMD4-208ENST00000563220 CLRN3Q8NCR9 226 aa14.44□□□□□ -0.1
COMMD4-208ENST00000563220 C1orf159Q96HA4 380 aa14.44□□□□□ -0.1
COMMD4-208ENST00000563220 ANKRD17O75179 2603 aaKnown RBP14.44□□□□□ -0.1
COMMD4-208ENST00000563220 NPY1RP25929 384 aa14.44□□□□□ -0.1
COMMD4-208ENST00000563220 SLC25A24Q6NUK1 477 aa14.44□□□□□ -0.1
COMMD4-208ENST00000563220 MMD2Q8IY49 270 aa14.44□□□□□ -0.1
COMMD4-208ENST00000563220 OR2G3Q8NGZ4 309 aa14.44□□□□□ -0.1
COMMD4-208ENST00000563220 LYPD6BQ8NI32 183 aa14.44□□□□□ -0.1
COMMD4-208ENST00000563220 TMEM147Q9BVK8 224 aa14.44□□□□□ -0.1
COMMD4-208ENST00000563220 WDR61Q9GZS3 305 aaKnown RBP14.44□□□□□ -0.1
COMMD4-208ENST00000563220 UQCC1Q9NVA1 299 aa14.44□□□□□ -0.1
COMMD4-208ENST00000563220 IGHV3OR16-10A0A075B7F0 116 aa14.43□□□□□ -0.1
COMMD4-208ENST00000563220 UBE2L5PA0A1B0GUS4 154 aa14.43□□□□□ -0.1
COMMD4-208ENST00000563220 FAM74A7A6NL05 159 aa14.43□□□□□ -0.1
COMMD4-208ENST00000563220 FCN1O00602 326 aa14.43□□□□□ -0.1
COMMD4-208ENST00000563220 H2AFB1P0C5Y9 115 aa14.43□□□□□ -0.1
COMMD4-208ENST00000563220 CTRB1P17538 263 aa14.43□□□□□ -0.1
COMMD4-208ENST00000563220 MMDQ15546 238 aa14.43□□□□□ -0.1
COMMD4-208ENST00000563220 FAM74A3Q4VXF1 159 aa14.43□□□□□ -0.1
COMMD4-208ENST00000563220 CTRB2Q6GPI1 263 aa14.43□□□□□ -0.1
COMMD4-208ENST00000563220 TMEM182Q6ZP80 229 aaPredicted RBP14.43□□□□□ -0.1
COMMD4-208ENST00000563220 PPP1R27Q86WC6 154 aa14.43□□□□□ -0.1
COMMD4-208ENST00000563220 MAPK1IP1LQ8NDC0 245 aa14.43□□□□□ -0.1
COMMD4-208ENST00000563220 SCGB1C1Q8TD33 95 aa14.43□□□□□ -0.1
COMMD4-208ENST00000563220 GNPNAT1Q96EK6 184 aaPredicted RBP14.43□□□□□ -0.1
COMMD4-208ENST00000563220 HIF1ANQ9NWT6 349 aa14.43□□□□□ -0.1
COMMD4-208ENST00000563220 NAV2Q8IVL1 2488 aa14.43□□□□□ -0.1
COMMD4-208ENST00000563220 F8W036 122 aa14.42□□□□□ -0.1
COMMD4-208ENST00000563220 INS-IGF2F8WCM5 200 aa14.42□□□□□ -0.1
COMMD4-208ENST00000563220 NUPL2O15504 423 aaKnown RBP14.42□□□□□ -0.1
COMMD4-208ENST00000563220 IFNA4P05014 189 aa14.42□□□□□ -0.1
COMMD4-208ENST00000563220 RAB11AP62491 216 aa14.42□□□□□ -0.1
COMMD4-208ENST00000563220 HES1Q14469 280 aa14.42□□□□□ -0.1
COMMD4-208ENST00000563220 VWC2Q2TAL6 325 aa14.42□□□□□ -0.1
COMMD4-208ENST00000563220 BSXQ3C1V8 233 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms