RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 TTC9CQ8N5M4 171 aa4.8□□□□□ -1.64
CNOT1-204ENST00000563130 LINC00482Q8N8I6 264 aa4.8□□□□□ -1.64
CNOT1-204ENST00000563130 KLHL30-AS1Q8NEE0 82 aa4.8□□□□□ -1.64
CNOT1-204ENST00000563130 DMBX1Q8NFW5 382 aa4.8□□□□□ -1.64
CNOT1-204ENST00000563130 CASTOR1Q8WTX7 329 aa4.8□□□□□ -1.64
CNOT1-204ENST00000563130 AKIP1Q9NQ31 210 aa4.8□□□□□ -1.64
CNOT1-204ENST00000563130 COPZ2Q9P299 210 aa4.8□□□□□ -1.64
CNOT1-204ENST00000563130 KLK9Q9UKQ9 250 aa4.8□□□□□ -1.64
CNOT1-204ENST00000563130 VSIG4Q9Y279 399 aa4.8□□□□□ -1.64
CNOT1-204ENST00000563130 TRBV9A0A0B4J1U6 114 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 CRYGCP07315 174 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 OR9G9P0C7N8 305 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 P0C879 139 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 MYOD1P15172 320 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 FAUP35544 74 aaKnown RBP4.79□□□□□ -1.64
CNOT1-204ENST00000563130 G6PCP35575 357 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 MYCNOSP40205 109 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 RPL27AP46776 148 aaKnown RBP4.79□□□□□ -1.64
CNOT1-204ENST00000563130 OR2B8PP59922 312 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 CCDC71LQ8N9Z2 235 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 OR5T1Q8NG75 326 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 GLYATL2Q8WU03 294 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 TMEM230Q96A57 120 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 GALNT14Q96FL9 552 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 RAX2Q96IS3 184 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 GNB4Q9HAV0 340 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 BATF3Q9NR55 127 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 MCUBQ9NWR8 336 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 NBEAL1Q6ZS30 2694 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 IGLC7A0M8Q6 106 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 HMX3A6NHT5 357 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 CRYM-AS1A6NIL9 109 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 NPIPB5A8MRT5 1133 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 NUDT19A8MXV4 375 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 RBMXL2O75526 392 aaKnown RBP4.79□□□□□ -1.64
CNOT1-204ENST00000563130 CDS2O95674 445 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 SERPINE2P07093 398 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 APELAP0DMC3 54 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 CD40LGP29965 261 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 ERVK-16P61578 105 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 DEFB136Q30KP8 78 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 SP6Q3SY56 376 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 MS4A10Q96PG2 267 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 SCGB3A2Q96PL1 93 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 TSC22D3Q99576 134 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 PHB2Q99623 299 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 SRSF8Q9BRL6 282 aaKnown RBP4.79□□□□□ -1.64
CNOT1-204ENST00000563130 COMMD5Q9GZQ3 224 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 TMEM222Q9H0R3 208 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 NAA60Q9H7X0 242 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 TMEM14BQ9NUH8 114 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 PTTG2Q9NZH5 202 aa4.79□□□□□ -1.64
CNOT1-204ENST00000563130 C14orf166Q9Y224 244 aaKnown RBP4.79□□□□□ -1.64
CNOT1-204ENST00000563130 TEX50A0A1B0GTY4 177 aa4.78□□□□□ -1.64
CNOT1-204ENST00000563130 DBX1A6NMT0 343 aa4.78□□□□□ -1.64
CNOT1-204ENST00000563130 C15orf61A6NNL5 157 aa4.78□□□□□ -1.64
CNOT1-204ENST00000563130 CCL24O00175 119 aa4.78□□□□□ -1.64
CNOT1-204ENST00000563130 IGKV1-5P01602 117 aa4.78□□□□□ -1.64
CNOT1-204ENST00000563130 TRGV3P03979 118 aa4.78□□□□□ -1.64
CNOT1-204ENST00000563130 LGALS1P09382 135 aaKnown RBP4.78□□□□□ -1.64
CNOT1-204ENST00000563130 OR5AC1P0C628 307 aa4.78□□□□□ -1.64
CNOT1-204ENST00000563130 IL7P13232 177 aa4.78□□□□□ -1.64
CNOT1-204ENST00000563130 AREGP15514 252 aa4.78□□□□□ -1.64
CNOT1-204ENST00000563130 CTRB1P17538 263 aa4.78□□□□□ -1.64
CNOT1-204ENST00000563130 PSMB6P28072 239 aa4.78□□□□□ -1.64
CNOT1-204ENST00000563130 TPPP2P59282 170 aa4.78□□□□□ -1.64
CNOT1-204ENST00000563130 SUPT4H1P63272 117 aaKnown RBP4.78□□□□□ -1.64
CNOT1-204ENST00000563130 CTRB2Q6GPI1 263 aa4.78□□□□□ -1.64
CNOT1-204ENST00000563130 THOC7Q6I9Y2 204 aaKnown RBP4.78□□□□□ -1.64
CNOT1-204ENST00000563130 OR11H1Q8NG94 326 aa4.78□□□□□ -1.64
CNOT1-204ENST00000563130 OR5B3Q8NH48 314 aa4.78□□□□□ -1.64
CNOT1-204ENST00000563130 LHFPL5Q8TAF8 219 aa4.78□□□□□ -1.64
CNOT1-204ENST00000563130 DUX3Q96PT4 197 aa4.78□□□□□ -1.64
CNOT1-204ENST00000563130 SLC25A21Q9BQT8 299 aaPredicted RBP4.78□□□□□ -1.64
CNOT1-204ENST00000563130 NDUFA4L2Q9NRX3 87 aa4.78□□□□□ -1.64
CNOT1-204ENST00000563130 ZNF257Q9Y2Q1 563 aa4.78□□□□□ -1.64
CNOT1-204ENST00000563130 NSG2Q9Y328 171 aa4.78□□□□□ -1.64
CNOT1-204ENST00000563130 NOTCH3Q9UM47 2321 aa4.78□□□□□ -1.64
CNOT1-204ENST00000563130 A0A0G2JLM5 398 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 TEX13DA0A0J9YY54 714 aaPredicted RBP4.77□□□□□ -1.65
CNOT1-204ENST00000563130 NAP1L6A6NFF2 107 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 BTCP35070 178 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 DHODHQ02127 395 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 AARDQ4LEZ3 155 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 KPRPQ5T749 579 aaPredicted RBP4.77□□□□□ -1.65
CNOT1-204ENST00000563130 TRIQKQ629K1 86 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 ZNF57Q68EA5 555 aaPredicted RBP4.77□□□□□ -1.65
CNOT1-204ENST00000563130 ZNF429Q86V71 674 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 SLC25A42Q86VD7 318 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 USMG5Q96IX5 58 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 TMEM56Q96MV1 263 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 FYTTD1Q96QD9 318 aaKnown RBP4.77□□□□□ -1.65
CNOT1-204ENST00000563130 QTRT1Q9BXR0 403 aaKnown RBP4.77□□□□□ -1.65
CNOT1-204ENST00000563130 ALX4Q9H161 411 aaPredicted RBP4.77□□□□□ -1.65
CNOT1-204ENST00000563130 ZNF355PQ9NSJ1 428 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 COA4Q9NYJ1 87 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 PRNDQ9UKY0 176 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 TMEM56-RWDD3S4R434 201 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 A0A0B4J293 547 aa4.77□□□□□ -1.65
CNOT1-204ENST00000563130 A0A0G2JRQ6 117 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms