RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 APOBEC3AP31941 199 aaPredicted RBP9.52□□□□□ -0.89
PCAT1-202ENST00000561978 HFEQ30201 348 aa9.52□□□□□ -0.89
PCAT1-202ENST00000561978 ZNF672Q499Z4 452 aaPredicted RBP9.52□□□□□ -0.89
PCAT1-202ENST00000561978 TM4SF20Q53R12 229 aa9.52□□□□□ -0.89
PCAT1-202ENST00000561978 AWAT1Q58HT5 328 aa9.52□□□□□ -0.89
PCAT1-202ENST00000561978 ZNF429Q86V71 674 aa9.52□□□□□ -0.89
PCAT1-202ENST00000561978 FAM216BQ8N7L0 139 aa9.52□□□□□ -0.89
PCAT1-202ENST00000561978 GGACTQ9BVM4 153 aa9.52□□□□□ -0.89
PCAT1-202ENST00000561978 SLC39A9Q9NUM3 307 aa9.52□□□□□ -0.89
PCAT1-202ENST00000561978 SLC25A10Q9UBX3 287 aaPredicted RBP9.52□□□□□ -0.89
PCAT1-202ENST00000561978 MLXQ9UH92 298 aa9.52□□□□□ -0.89
PCAT1-202ENST00000561978 RPUSD1Q9UJJ7 312 aaKnown RBP9.52□□□□□ -0.89
PCAT1-202ENST00000561978 PPIAL4AQ9Y536 164 aa9.52□□□□□ -0.89
PCAT1-202ENST00000561978 PRRC2AP48634 2157 aaKnown RBP9.52□□□□□ -0.89
PCAT1-202ENST00000561978 PGPEP1LA6NFU8 196 aa9.52□□□□□ -0.89
PCAT1-202ENST00000561978 E7EQL1 145 aa9.52□□□□□ -0.89
PCAT1-202ENST00000561978 TMEM178BH3BS89 294 aa9.52□□□□□ -0.89
PCAT1-202ENST00000561978 HRASP01112 189 aa9.52□□□□□ -0.89
PCAT1-202ENST00000561978 SRP19P09132 144 aaKnown RBP9.52□□□□□ -0.89
PCAT1-202ENST00000561978 ICAM4Q14773 271 aa9.52□□□□□ -0.89
PCAT1-202ENST00000561978 RBMS3Q6XE24 437 aaKnown RBP9.52□□□□□ -0.89
PCAT1-202ENST00000561978 LYG1Q8N1E2 194 aa9.52□□□□□ -0.89
PCAT1-202ENST00000561978 LINC00528Q8N1L1 170 aa9.52□□□□□ -0.89
PCAT1-202ENST00000561978 ZNF439Q8NDP4 499 aa9.52□□□□□ -0.89
PCAT1-202ENST00000561978 RAB39BQ96DA2 213 aa9.52□□□□□ -0.89
PCAT1-202ENST00000561978 DSCAML1Q8TD84 2053 aa9.51□□□□□ -0.89
PCAT1-202ENST00000561978 SAA2-SAA4A0A096LPE2 208 aa9.51□□□□□ -0.89
PCAT1-202ENST00000561978 IGHV3-7P01780 117 aa9.51□□□□□ -0.89
PCAT1-202ENST00000561978 SAA2P0DJI9 122 aaPredicted RBP9.51□□□□□ -0.89
PCAT1-202ENST00000561978 DAOP14920 347 aa9.51□□□□□ -0.89
PCAT1-202ENST00000561978 FGF7P21781 194 aa9.51□□□□□ -0.89
PCAT1-202ENST00000561978 CDKN1BP46527 198 aa9.51□□□□□ -0.89
PCAT1-202ENST00000561978 RELBQ01201 579 aa9.51□□□□□ -0.89
PCAT1-202ENST00000561978 AKIRIN2Q53H80 203 aa9.51□□□□□ -0.89
PCAT1-202ENST00000561978 DUX4L9Q6RFH8 374 aaPredicted RBP9.51□□□□□ -0.89
PCAT1-202ENST00000561978 SLC25A48Q6ZT89 311 aaKnown RBP9.51□□□□□ -0.89
PCAT1-202ENST00000561978 SMIM15Q7Z3B0 74 aa9.51□□□□□ -0.89
PCAT1-202ENST00000561978 RCC1LQ96I51 464 aaKnown RBP9.51□□□□□ -0.89
PCAT1-202ENST00000561978 P2RX4Q99571 388 aa9.51□□□□□ -0.89
PCAT1-202ENST00000561978 HEYLQ9NQ87 328 aaPredicted RBP9.51□□□□□ -0.89
PCAT1-202ENST00000561978 TMEM140Q9NV12 185 aa9.51□□□□□ -0.89
PCAT1-202ENST00000561978 TANC2Q9HCD6 1990 aa9.51□□□□□ -0.89
PCAT1-202ENST00000561978 LOC102723971A0A1B0GUV8 181 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 MPDU1O75352 247 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 IFNA10P01566 189 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 SOD3P08294 240 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 RAB11AP62491 216 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 RPL31P62899 125 aaKnown RBP9.5□□□□□ -0.89
PCAT1-202ENST00000561978 RNF212Q495C1 297 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 AVPI1Q5T686 147 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 LCN15Q6UWW0 184 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 TCF23Q7RTU1 214 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 REC114Q7Z4M0 266 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 RXFP4Q8TDU9 374 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 C22orf15Q8WYQ4 148 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 LEAP2Q969E1 77 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 DYNLRB1Q9NP97 96 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 TMEM106BQ9NUM4 274 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 GNG13Q9P2W3 67 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 A0A087X0M5 115 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 A0A0U1RQK1 487 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 A0A1B0GX30 115 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 ZNF320A2RRD8 509 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 C15orf62A8K5M9 175 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 COLCA2A8K830 154 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 NDUFB3O43676 98 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 ARG1P05089 322 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 BCL2P10415 239 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 CDC34P49427 236 aaPredicted RBP9.5□□□□□ -0.89
PCAT1-202ENST00000561978 OR2B8PP59922 312 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 POU2AF1Q16633 256 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 RTL8BQ17RB0 113 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 LRRC10Q5BKY1 277 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 CCL17Q92583 94 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 RHOVQ96L33 236 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 NIPSNAP3BQ9BS92 247 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 ACTR3CQ9C0K3 210 aaPredicted RBP9.5□□□□□ -0.89
PCAT1-202ENST00000561978 VSIRQ9H7M9 311 aa9.5□□□□□ -0.89
PCAT1-202ENST00000561978 FOXA2Q9Y261 457 aaPredicted RBP9.5□□□□□ -0.89
PCAT1-202ENST00000561978 ACANP16112 2415 aa9.49□□□□□ -0.89
PCAT1-202ENST00000561978 CTXND1A0A1B0GTU2 59 aa9.49□□□□□ -0.89
PCAT1-202ENST00000561978 MAP1LC3B2A6NCE7 125 aa9.49□□□□□ -0.89
PCAT1-202ENST00000561978 C15orf61A6NNL5 157 aa9.49□□□□□ -0.89
PCAT1-202ENST00000561978 CYB5BO43169 146 aa9.49□□□□□ -0.89
PCAT1-202ENST00000561978 MT-ND4LP03901 98 aa9.49□□□□□ -0.89
PCAT1-202ENST00000561978 FOLR2P14207 255 aa9.49□□□□□ -0.89
PCAT1-202ENST00000561978 MDKP21741 143 aaPredicted RBP9.49□□□□□ -0.89
PCAT1-202ENST00000561978 CD1BP29016 333 aa9.49□□□□□ -0.89
PCAT1-202ENST00000561978 VDAC2P45880 294 aaPredicted RBP9.49□□□□□ -0.89
PCAT1-202ENST00000561978 ELLP55199 621 aaPredicted RBP9.49□□□□□ -0.89
PCAT1-202ENST00000561978 HSPE1P61604 102 aaKnown RBP9.49□□□□□ -0.89
PCAT1-202ENST00000561978 EFNB3Q15768 340 aa9.49□□□□□ -0.89
PCAT1-202ENST00000561978 ZNF726P1Q15940 193 aa9.49□□□□□ -0.89
PCAT1-202ENST00000561978 HEPN1Q6WQI6 88 aa9.49□□□□□ -0.89
PCAT1-202ENST00000561978 TGIF2LYQ8IUE0 185 aa9.49□□□□□ -0.89
PCAT1-202ENST00000561978 MUC15Q8N387 334 aa9.49□□□□□ -0.89
PCAT1-202ENST00000561978 ZNF383Q8NA42 475 aa9.49□□□□□ -0.89
PCAT1-202ENST00000561978 LHX4Q969G2 390 aa9.49□□□□□ -0.89
PCAT1-202ENST00000561978 ZNF714Q96N38 554 aa9.49□□□□□ -0.89
PCAT1-202ENST00000561978 NPCDR1Q9BY65 106 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms