RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 CCDC140Q96MF4 163 aa11.8□□□□□ -0.52
CCDC113-203ENST00000561517 NDUFA4L2Q9NRX3 87 aa11.8□□□□□ -0.52
CCDC113-203ENST00000561517 SNAPC5O75971 98 aa11.79□□□□□ -0.52
CCDC113-203ENST00000561517 RAB3DO95716 219 aa11.79□□□□□ -0.52
CCDC113-203ENST00000561517 DEFA4P12838 97 aa11.79□□□□□ -0.52
CCDC113-203ENST00000561517 PGAM2P15259 253 aa11.79□□□□□ -0.52
CCDC113-203ENST00000561517 STEAP1BQ6NZ63 245 aa11.79□□□□□ -0.52
CCDC113-203ENST00000561517 HAPLN4Q86UW8 402 aa11.79□□□□□ -0.52
CCDC113-203ENST00000561517 OR10W1Q8NGF6 305 aa11.79□□□□□ -0.52
CCDC113-203ENST00000561517 TERB2Q8NHR7 220 aa11.79□□□□□ -0.52
CCDC113-203ENST00000561517 TSC22D3Q99576 134 aa11.79□□□□□ -0.52
CCDC113-203ENST00000561517 TMEM14BQ9NUH8 114 aa11.79□□□□□ -0.52
CCDC113-203ENST00000561517 PRNDQ9UKY0 176 aa11.79□□□□□ -0.52
CCDC113-203ENST00000561517 NSG2Q9Y328 171 aa11.79□□□□□ -0.52
CCDC113-203ENST00000561517 SMAD5-AS1Q9Y6J3 95 aa11.79□□□□□ -0.52
CCDC113-203ENST00000561517 CEPT1Q9Y6K0 416 aa11.79□□□□□ -0.52
CCDC113-203ENST00000561517 PPP5D1E7EU14 171 aa11.78□□□□□ -0.52
CCDC113-203ENST00000561517 GGCTO75223 188 aaKnown RBP11.78□□□□□ -0.52
CCDC113-203ENST00000561517 SERPINE2P07093 398 aa11.78□□□□□ -0.52
CCDC113-203ENST00000561517 OR13C7P0DN81 318 aa11.78□□□□□ -0.52
CCDC113-203ENST00000561517 WT1-ASQ06250 92 aa11.78□□□□□ -0.52
CCDC113-203ENST00000561517 IL18Q14116 193 aa11.78□□□□□ -0.52
CCDC113-203ENST00000561517 GDPD1Q8N9F7 314 aa11.78□□□□□ -0.52
CCDC113-203ENST00000561517 OR5B3Q8NH48 314 aa11.78□□□□□ -0.52
CCDC113-203ENST00000561517 EEF1AKMT3Q96AZ1 226 aa11.78□□□□□ -0.52
CCDC113-203ENST00000561517 CXorf58Q96LI9 332 aa11.78□□□□□ -0.52
CCDC113-203ENST00000561517 C6orf62Q9GZU0 229 aaPredicted RBP11.78□□□□□ -0.52
CCDC113-203ENST00000561517 NXF2Q9GZY0 626 aaKnown RBP11.78□□□□□ -0.52
CCDC113-203ENST00000561517 FKBP11Q9NYL4 201 aa11.78□□□□□ -0.52
CCDC113-203ENST00000561517 PEMTQ9UBM1 199 aa11.78□□□□□ -0.52
CCDC113-203ENST00000561517 OR51B2Q9Y5P1 312 aa11.78□□□□□ -0.52
CCDC113-203ENST00000561517 TRBV7-1A0A0A6YYK4 115 aa11.77□□□□□ -0.53
CCDC113-203ENST00000561517 MFSD2BA6NFX1 497 aa11.77□□□□□ -0.53
CCDC113-203ENST00000561517 DBX1A6NMT0 343 aa11.77□□□□□ -0.53
CCDC113-203ENST00000561517 C15orf61A6NNL5 157 aa11.77□□□□□ -0.53
CCDC113-203ENST00000561517 H0Y980 276 aa11.77□□□□□ -0.53
CCDC113-203ENST00000561517 IGHV3-23P01764 117 aa11.77□□□□□ -0.53
CCDC113-203ENST00000561517 NHLRC4P0CG21 123 aaPredicted RBP11.77□□□□□ -0.53
CCDC113-203ENST00000561517 PI3P19957 117 aa11.77□□□□□ -0.53
CCDC113-203ENST00000561517 MECP2P51608 486 aaKnown RBP11.77□□□□□ -0.53
CCDC113-203ENST00000561517 PIGPP57054 158 aa11.77□□□□□ -0.53
CCDC113-203ENST00000561517 MEF2DQ14814 521 aa11.77□□□□□ -0.53
CCDC113-203ENST00000561517 C11orf87Q6NUJ2 197 aa11.77□□□□□ -0.53
CCDC113-203ENST00000561517 CLEC19AQ6UXS0 136 aa11.77□□□□□ -0.53
CCDC113-203ENST00000561517 GPHB5Q86YW7 130 aa11.77□□□□□ -0.53
CCDC113-203ENST00000561517 ZFAND1Q8TCF1 268 aa11.77□□□□□ -0.53
CCDC113-203ENST00000561517 LSM10Q969L4 123 aaKnown RBP11.77□□□□□ -0.53
CCDC113-203ENST00000561517 SOSTQ9BQB4 213 aa11.77□□□□□ -0.53
CCDC113-203ENST00000561517 S4R3C0 116 aa11.77□□□□□ -0.53
CCDC113-203ENST00000561517 LGALS9O00182 355 aa11.76□□□□□ -0.53
CCDC113-203ENST00000561517 GSTZ1O43708 216 aaPredicted RBP11.76□□□□□ -0.53
CCDC113-203ENST00000561517 OR2C1O95371 312 aa11.76□□□□□ -0.53
CCDC113-203ENST00000561517 HLA-AP01891 365 aaKnown RBP11.76□□□□□ -0.53
CCDC113-203ENST00000561517 ARL3P36405 182 aa11.76□□□□□ -0.53
CCDC113-203ENST00000561517 PPP5CP53041 499 aa11.76□□□□□ -0.53
CCDC113-203ENST00000561517 SCGB2B2Q4G0G5 96 aa11.76□□□□□ -0.53
CCDC113-203ENST00000561517 ADAMTSL5Q6ZMM2 481 aa11.76□□□□□ -0.53
CCDC113-203ENST00000561517 H2BFWTQ7Z2G1 175 aa11.76□□□□□ -0.53
CCDC113-203ENST00000561517 OR13C8Q8NGS7 320 aa11.76□□□□□ -0.53
CCDC113-203ENST00000561517 ZNF502Q8TBZ5 544 aa11.76□□□□□ -0.53
CCDC113-203ENST00000561517 MRGPRFQ96AM1 343 aa11.76□□□□□ -0.53
CCDC113-203ENST00000561517 TP53RKQ96S44 253 aa11.76□□□□□ -0.53
CCDC113-203ENST00000561517 THYN1Q9P016 225 aa11.76□□□□□ -0.53
CCDC113-203ENST00000561517 STAB2Q8WWQ8 2551 aa11.75□□□□□ -0.53
CCDC113-203ENST00000561517 CYB5BO43169 146 aa11.75□□□□□ -0.53
CCDC113-203ENST00000561517 CTSDP07339 412 aaPredicted RBP11.75□□□□□ -0.53
CCDC113-203ENST00000561517 TNFSF8P32971 234 aa11.75□□□□□ -0.53
CCDC113-203ENST00000561517 MFAP2P55001 183 aa11.75□□□□□ -0.53
CCDC113-203ENST00000561517 FAAP20Q6NZ36 180 aa11.75□□□□□ -0.53
CCDC113-203ENST00000561517 Q8N1Y9 231 aa11.75□□□□□ -0.53
CCDC113-203ENST00000561517 CCDC71LQ8N9Z2 235 aa11.75□□□□□ -0.53
CCDC113-203ENST00000561517 OR2K2Q8NGT1 345 aa11.75□□□□□ -0.53
CCDC113-203ENST00000561517 MCFD2Q8NI22 146 aa11.75□□□□□ -0.53
CCDC113-203ENST00000561517 MARCH1Q8TCQ1 289 aa11.75□□□□□ -0.53
CCDC113-203ENST00000561517 VN1R17PQ8TDU5 208 aa11.75□□□□□ -0.53
CCDC113-203ENST00000561517 TMEM56Q96MV1 263 aa11.75□□□□□ -0.53
CCDC113-203ENST00000561517 HINT2Q9BX68 163 aa11.75□□□□□ -0.53
CCDC113-203ENST00000561517 COPZ2Q9P299 210 aa11.75□□□□□ -0.53
CCDC113-203ENST00000561517 RSL24D1Q9UHA3 163 aaKnown RBP11.75□□□□□ -0.53
CCDC113-203ENST00000561517 F11RQ9Y624 299 aaKnown RBP11.75□□□□□ -0.53
CCDC113-203ENST00000561517 C3orf85A0A1B0GTC6 90 aa11.74□□□□□ -0.53
CCDC113-203ENST00000561517 DISC1C4P0D8 188 aa11.74□□□□□ -0.53
CCDC113-203ENST00000561517 CLEC3BP05452 202 aa11.74□□□□□ -0.53
CCDC113-203ENST00000561517 P0C879 139 aa11.74□□□□□ -0.53
CCDC113-203ENST00000561517 AKAIN1P0CW23 69 aa11.74□□□□□ -0.53
CCDC113-203ENST00000561517 SURF2Q15527 256 aaPredicted RBP11.74□□□□□ -0.53
CCDC113-203ENST00000561517 SLC25A24Q6NUK1 477 aa11.74□□□□□ -0.53
CCDC113-203ENST00000561517 Q8N402 240 aa11.74□□□□□ -0.53
CCDC113-203ENST00000561517 OR4C16Q8NGL9 310 aa11.74□□□□□ -0.53
CCDC113-203ENST00000561517 OR4A16Q8NH70 328 aa11.74□□□□□ -0.53
CCDC113-203ENST00000561517 THAP7Q9BT49 309 aaPredicted RBP11.74□□□□□ -0.53
CCDC113-203ENST00000561517 RBM38Q9H0Z9 239 aaKnown RBP11.74□□□□□ -0.53
CCDC113-203ENST00000561517 ANKRD20A5PA0PJZ0 165 aa11.73□□□□□ -0.53
CCDC113-203ENST00000561517 FABP12A6NFH5 140 aa11.73□□□□□ -0.53
CCDC113-203ENST00000561517 C2orf70A6NJV1 201 aa11.73□□□□□ -0.53
CCDC113-203ENST00000561517 B3GALNT1O75752 331 aa11.73□□□□□ -0.53
CCDC113-203ENST00000561517 IGKV1-5P01602 117 aa11.73□□□□□ -0.53
CCDC113-203ENST00000561517 UCP1P25874 307 aa11.73□□□□□ -0.53
CCDC113-203ENST00000561517 HSPE1P61604 102 aaKnown RBP11.73□□□□□ -0.53
CCDC113-203ENST00000561517 PRCDQ00LT1 54 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms