RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 OR8U8P0C7N1 319 aa8.41□□□□□ -1.06
TPM1-229ENST00000561242 PSMB6P28072 239 aa8.41□□□□□ -1.06
TPM1-229ENST00000561242 ASAH1Q13510 395 aa8.41□□□□□ -1.06
TPM1-229ENST00000561242 SMCO1Q147U7 214 aa8.41□□□□□ -1.06
TPM1-229ENST00000561242 FBLN7Q53RD9 439 aa8.41□□□□□ -1.06
TPM1-229ENST00000561242 SELENOHQ8IZQ5 122 aaKnown RBP8.41□□□□□ -1.06
TPM1-229ENST00000561242 MINDY2Q8NBR6 621 aa8.41□□□□□ -1.06
TPM1-229ENST00000561242 NECAP1Q8NC96 275 aa8.41□□□□□ -1.06
TPM1-229ENST00000561242 RBMXL1Q96E39 390 aaKnown RBP8.41□□□□□ -1.06
TPM1-229ENST00000561242 OR5B12Q96R08 314 aa8.41□□□□□ -1.06
TPM1-229ENST00000561242 ELOVL1Q9BW60 279 aa8.41□□□□□ -1.06
TPM1-229ENST00000561242 C20orf85Q9H1P6 137 aa8.41□□□□□ -1.06
TPM1-229ENST00000561242 RANGRFQ9HD47 186 aaPredicted RBP8.41□□□□□ -1.06
TPM1-229ENST00000561242 NUDT15Q9NV35 164 aa8.41□□□□□ -1.06
TPM1-229ENST00000561242 FBXL7Q9UJT9 491 aa8.41□□□□□ -1.06
TPM1-229ENST00000561242 PAIP2BQ9ULR5 123 aaKnown RBP8.41□□□□□ -1.06
TPM1-229ENST00000561242 TMEM56-RWDD3S4R434 201 aa8.41□□□□□ -1.06
TPM1-229ENST00000561242 VPS13CQ709C8 3753 aa8.41□□□□□ -1.06
TPM1-229ENST00000561242 CELSR1Q9NYQ6 3014 aa8.4□□□□□ -1.06
TPM1-229ENST00000561242 RPS10-NUDT3A0A1W2PQS6 291 aa8.4□□□□□ -1.06
TPM1-229ENST00000561242 C5orf51A6NDU8 294 aa8.4□□□□□ -1.06
TPM1-229ENST00000561242 NPIPB5A8MRT5 1133 aa8.4□□□□□ -1.06
TPM1-229ENST00000561242 CCL24O00175 119 aa8.4□□□□□ -1.06
TPM1-229ENST00000561242 HOXB5P09067 269 aa8.4□□□□□ -1.06
TPM1-229ENST00000561242 ZP3P21754 424 aa8.4□□□□□ -1.06
TPM1-229ENST00000561242 CRIP2P52943 208 aaPredicted RBP8.4□□□□□ -1.06
TPM1-229ENST00000561242 SPCS3P61009 180 aa8.4□□□□□ -1.06
TPM1-229ENST00000561242 RAB11AP62491 216 aa8.4□□□□□ -1.06
TPM1-229ENST00000561242 SRSF4Q08170 494 aaKnown RBP8.4□□□□□ -1.06
TPM1-229ENST00000561242 PPP1R1AQ13522 171 aa8.4□□□□□ -1.06
TPM1-229ENST00000561242 TMEM187Q14656 261 aa8.4□□□□□ -1.06
TPM1-229ENST00000561242 TREML4Q6UXN2 200 aa8.4□□□□□ -1.06
TPM1-229ENST00000561242 LYG2Q86SG7 212 aa8.4□□□□□ -1.06
TPM1-229ENST00000561242 OR1N2Q8NGR9 330 aa8.4□□□□□ -1.06
TPM1-229ENST00000561242 GLYATL2Q8WU03 294 aa8.4□□□□□ -1.06
TPM1-229ENST00000561242 C4orf3Q8WVX3 66 aa8.4□□□□□ -1.06
TPM1-229ENST00000561242 MISP3Q96FF7 219 aa8.4□□□□□ -1.06
TPM1-229ENST00000561242 SEC22AQ96IW7 307 aa8.4□□□□□ -1.06
TPM1-229ENST00000561242 CACNG5Q9UF02 275 aa8.4□□□□□ -1.06
TPM1-229ENST00000561242 JMJD1CQ15652 2540 aa8.39□□□□□ -1.07
TPM1-229ENST00000561242 C9orf170A2RU37 121 aa8.39□□□□□ -1.07
TPM1-229ENST00000561242 PRAF2O60831 178 aa8.39□□□□□ -1.07
TPM1-229ENST00000561242 DUS4LO95620 317 aaKnown RBP8.39□□□□□ -1.07
TPM1-229ENST00000561242 IFNA10P01566 189 aa8.39□□□□□ -1.07
TPM1-229ENST00000561242 IGHV3-11P01762 117 aa8.39□□□□□ -1.07
TPM1-229ENST00000561242 HSPB1P04792 205 aaKnown RBP8.39□□□□□ -1.07
TPM1-229ENST00000561242 REG1AP05451 166 aa8.39□□□□□ -1.07
TPM1-229ENST00000561242 ANXA7P20073 488 aaKnown RBP8.39□□□□□ -1.07
TPM1-229ENST00000561242 PVALBP20472 110 aaPredicted RBP8.39□□□□□ -1.07
TPM1-229ENST00000561242 PSMB8P28062 276 aa8.39□□□□□ -1.07
TPM1-229ENST00000561242 PPIFP30405 207 aaKnown RBP8.39□□□□□ -1.07
TPM1-229ENST00000561242 RHOGP84095 191 aa8.39□□□□□ -1.07
TPM1-229ENST00000561242 ZNF616Q08AN1 781 aa8.39□□□□□ -1.07
TPM1-229ENST00000561242 RPEL1Q2QD12 228 aa8.39□□□□□ -1.07
TPM1-229ENST00000561242 PRR31Q5SQ13 230 aa8.39□□□□□ -1.07
TPM1-229ENST00000561242 C10orf55Q5SWW7 151 aa8.39□□□□□ -1.07
TPM1-229ENST00000561242 ETFRF1Q6IPR1 90 aa8.39□□□□□ -1.07
TPM1-229ENST00000561242 ZNF429Q86V71 674 aa8.39□□□□□ -1.07
TPM1-229ENST00000561242 OR11H1Q8NG94 326 aa8.39□□□□□ -1.07
TPM1-229ENST00000561242 CIB3Q96Q77 187 aaPredicted RBP8.39□□□□□ -1.07
TPM1-229ENST00000561242 ALX4Q9H161 411 aaPredicted RBP8.39□□□□□ -1.07
TPM1-229ENST00000561242 GNB4Q9HAV0 340 aa8.39□□□□□ -1.07
TPM1-229ENST00000561242 GSKIPQ9P0R6 139 aa8.39□□□□□ -1.07
TPM1-229ENST00000561242 PEF1Q9UBV8 284 aaKnown RBP8.39□□□□□ -1.07
TPM1-229ENST00000561242 TRBV7-1A0A0A6YYK4 115 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 TRAV3A0A0B4J244 114 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 ANKRD34BA5PLL1 514 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 INMT-MINDY4F8WBC2 141 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 LINC01619G3V211 115 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 L7N2F9 121 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 ST8SIA3O43173 380 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 SSNA1O43805 119 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 OR2J3O76001 311 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 IGLV1-40P01703 118 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 RLN2P04090 185 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 HTR2BP41595 481 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 BRWD1-AS2P59051 145 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 VAMP2P63027 116 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 PRCDQ00LT1 54 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 FAM106AQ4KMX7 169 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 Q56UQ5 140 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 GSG1LQ6UXU4 331 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 C8orf86Q6ZUL3 223 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 LYZL2Q7Z4W2 148 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 ZNF491Q8N8L2 437 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 OR52E5Q8NH55 327 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 PINX1Q96BK5 328 aaKnown RBP8.38□□□□□ -1.07
TPM1-229ENST00000561242 GPR146Q96CH1 333 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 OR4C12Q96R67 309 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 SDHCQ99643 169 aaPredicted RBP8.38□□□□□ -1.07
TPM1-229ENST00000561242 NDUFA4L2Q9NRX3 87 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 TMEM14BQ9NUH8 114 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 FLVCR2Q9UPI3 526 aa8.38□□□□□ -1.07
TPM1-229ENST00000561242 ZNF469Q96JG9 3925 aaPredicted RBP8.38□□□□□ -1.07
TPM1-229ENST00000561242 PLA2G10O15496 165 aa8.37□□□□□ -1.07
TPM1-229ENST00000561242 SCGB1D2O95969 90 aa8.37□□□□□ -1.07
TPM1-229ENST00000561242 IFNA4P05014 189 aa8.37□□□□□ -1.07
TPM1-229ENST00000561242 IL6RP08887 468 aaPredicted RBP8.37□□□□□ -1.07
TPM1-229ENST00000561242 LGALS1P09382 135 aaKnown RBP8.37□□□□□ -1.07
TPM1-229ENST00000561242 EGR2P11161 476 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms