RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 ERVK-16P61578 105 aa9.56□□□□□ -0.88
CHRNA3-208ENST00000561128 TSPAN5P62079 268 aa9.56□□□□□ -0.88
CHRNA3-208ENST00000561128 DCTN2Q13561 401 aaKnown RBP9.56□□□□□ -0.88
CHRNA3-208ENST00000561128 SPINK9Q5DT21 86 aa9.56□□□□□ -0.88
CHRNA3-208ENST00000561128 RNASE10Q5GAN6 216 aaKnown RBP9.56□□□□□ -0.88
CHRNA3-208ENST00000561128 GDPD1Q8N9F7 314 aa9.56□□□□□ -0.88
CHRNA3-208ENST00000561128 CD300LFQ8TDQ1 290 aa9.56□□□□□ -0.88
CHRNA3-208ENST00000561128 AP3S1Q92572 193 aa9.56□□□□□ -0.88
CHRNA3-208ENST00000561128 HINT2Q9BX68 163 aa9.56□□□□□ -0.88
CHRNA3-208ENST00000561128 COMMD5Q9GZQ3 224 aa9.56□□□□□ -0.88
CHRNA3-208ENST00000561128 TMEM14BQ9NUH8 114 aa9.56□□□□□ -0.88
CHRNA3-208ENST00000561128 SIGLEC8Q9NYZ4 499 aa9.56□□□□□ -0.88
CHRNA3-208ENST00000561128 OR51B2Q9Y5P1 312 aa9.56□□□□□ -0.88
CHRNA3-208ENST00000561128 C15orf61A6NNL5 157 aa9.55□□□□□ -0.88
CHRNA3-208ENST00000561128 ZNF785A8K8V0 405 aa9.55□□□□□ -0.88
CHRNA3-208ENST00000561128 H3BMQ9 156 aa9.55□□□□□ -0.88
CHRNA3-208ENST00000561128 K7EIM0 57 aa9.55□□□□□ -0.88
CHRNA3-208ENST00000561128 GGCTO75223 188 aaKnown RBP9.55□□□□□ -0.88
CHRNA3-208ENST00000561128 CD7P09564 240 aa9.55□□□□□ -0.88
CHRNA3-208ENST00000561128 TRAPPC2P0DI81 140 aa9.55□□□□□ -0.88
CHRNA3-208ENST00000561128 TRAPPC2BP0DI82 140 aa9.55□□□□□ -0.88
CHRNA3-208ENST00000561128 PGAM2P15259 253 aa9.55□□□□□ -0.88
CHRNA3-208ENST00000561128 CMTM1Q8IZ96 169 aa9.55□□□□□ -0.88
CHRNA3-208ENST00000561128 SLC38A6Q8IZM9 456 aa9.55□□□□□ -0.88
CHRNA3-208ENST00000561128 OR1L8Q8NGR8 309 aa9.55□□□□□ -0.88
CHRNA3-208ENST00000561128 OR13C8Q8NGS7 320 aa9.55□□□□□ -0.88
CHRNA3-208ENST00000561128 EEF1AKMT3Q96AZ1 226 aa9.55□□□□□ -0.88
CHRNA3-208ENST00000561128 WDR89Q96FK6 387 aaPredicted RBP9.55□□□□□ -0.88
CHRNA3-208ENST00000561128 WWC2-AS2Q96NR7 200 aa9.55□□□□□ -0.88
CHRNA3-208ENST00000561128 SLIRPQ9GZT3 109 aaKnown RBP9.55□□□□□ -0.88
CHRNA3-208ENST00000561128 CCDC59Q9P031 241 aaKnown RBP9.55□□□□□ -0.88
CHRNA3-208ENST00000561128 MLXQ9UH92 298 aa9.55□□□□□ -0.88
CHRNA3-208ENST00000561128 HUWE1Q7Z6Z7 4374 aaKnown RBP9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 STAB2Q8WWQ8 2551 aa9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 IGHV3OR16-8A0A075B7F1 116 aa9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 RGS5O15539 181 aa9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 SERPINE2P07093 398 aa9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 FGF2P09038 288 aa9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 NHLRC4P0CG21 123 aaPredicted RBP9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 DEFA4P12838 97 aa9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 FOLR2P14207 255 aa9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 PTBP1P26599 531 aaKnown RBP eCLIP9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 PIGPP57054 158 aa9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 RND3P61587 244 aa9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 DEFB114Q30KQ6 69 aa9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 SP6Q3SY56 376 aa9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 TM4SF20Q53R12 229 aa9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 TMEM229BQ8NBD8 167 aa9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 MARCH1Q8TCQ1 289 aa9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 SMIM4Q8WVI0 70 aa9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 BORCS5Q969J3 196 aa9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 ISOC1Q96CN7 298 aa9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 RCHY1Q96PM5 261 aa9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 CHRDL1Q9BU40 450 aa9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 PLEKHA3Q9HB20 300 aa9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 RETNQ9HD89 108 aa9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 F11RQ9Y624 299 aaKnown RBP9.54□□□□□ -0.88
CHRNA3-208ENST00000561128 A8MWP6 167 aa9.53□□□□□ -0.88
CHRNA3-208ENST00000561128 GABARAPH6UMI1 98 aa9.53□□□□□ -0.88
CHRNA3-208ENST00000561128 LGALS9O00182 355 aa9.53□□□□□ -0.88
CHRNA3-208ENST00000561128 RAB3DO95716 219 aa9.53□□□□□ -0.88
CHRNA3-208ENST00000561128 IGHV3-48P01763 117 aa9.53□□□□□ -0.88
CHRNA3-208ENST00000561128 CLEC3BP05452 202 aa9.53□□□□□ -0.88
CHRNA3-208ENST00000561128 HIST1H1BP16401 226 aaKnown RBP9.53□□□□□ -0.88
CHRNA3-208ENST00000561128 ADMP35318 185 aa9.53□□□□□ -0.88
CHRNA3-208ENST00000561128 STEAP1BQ6NZ63 245 aa9.53□□□□□ -0.88
CHRNA3-208ENST00000561128 TMEM61Q8N0U2 210 aa9.53□□□□□ -0.88
CHRNA3-208ENST00000561128 Q8N402 240 aa9.53□□□□□ -0.88
CHRNA3-208ENST00000561128 OR4C16Q8NGL9 310 aa9.53□□□□□ -0.88
CHRNA3-208ENST00000561128 LHFPL5Q8TAF8 219 aa9.53□□□□□ -0.88
CHRNA3-208ENST00000561128 RAB2BQ8WUD1 216 aa9.53□□□□□ -0.88
CHRNA3-208ENST00000561128 LSM10Q969L4 123 aaKnown RBP9.53□□□□□ -0.88
CHRNA3-208ENST00000561128 SRSF8Q9BRL6 282 aaKnown RBP9.53□□□□□ -0.88
CHRNA3-208ENST00000561128 TM2D3Q9BRN9 247 aa9.53□□□□□ -0.88
CHRNA3-208ENST00000561128 AIFM2Q9BRQ8 373 aa9.53□□□□□ -0.88
CHRNA3-208ENST00000561128 PEMTQ9UBM1 199 aa9.53□□□□□ -0.88
CHRNA3-208ENST00000561128 CEPT1Q9Y6K0 416 aa9.53□□□□□ -0.88
CHRNA3-208ENST00000561128 OR2T8A6NH00 312 aa9.52□□□□□ -0.89
CHRNA3-208ENST00000561128 H0Y980 276 aa9.52□□□□□ -0.89
CHRNA3-208ENST00000561128 CBLN1P23435 193 aa9.52□□□□□ -0.89
CHRNA3-208ENST00000561128 TMBIM6P55061 237 aa9.52□□□□□ -0.89
CHRNA3-208ENST00000561128 SCGB2B2Q4G0G5 96 aa9.52□□□□□ -0.89
CHRNA3-208ENST00000561128 LCN12Q6JVE5 192 aa9.52□□□□□ -0.89
CHRNA3-208ENST00000561128 BTNL8Q6UX41 500 aa9.52□□□□□ -0.89
CHRNA3-208ENST00000561128 GPHB5Q86YW7 130 aa9.52□□□□□ -0.89
CHRNA3-208ENST00000561128 CADM3Q8N126 398 aa9.52□□□□□ -0.89
CHRNA3-208ENST00000561128 ARRDC1Q8N5I2 433 aa9.52□□□□□ -0.89
CHRNA3-208ENST00000561128 DYNLRB2Q8TF09 96 aa9.52□□□□□ -0.89
CHRNA3-208ENST00000561128 PRR13Q9NZ81 148 aa9.52□□□□□ -0.89
CHRNA3-208ENST00000561128 TRBV7-1A0A0A6YYK4 115 aa9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 A0A0B4J293 547 aa9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 ZNF320A2RRD8 509 aa9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 A8MZ25 164 aa9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 TGOLN2O43493 480 aa9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 SNAPC5O75971 98 aa9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 DHFRP00374 187 aa9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 TBPP20226 339 aa9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 RPL5P46777 297 aaKnown RBP9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 TAS2R19P59542 299 aa9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 CD81P60033 236 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms