RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 HLA-DQA1P01909 254 aa13.64□□□□□ -0.23
TPM1-228ENST00000560975 OR1C1Q15619 314 aa13.64□□□□□ -0.23
TPM1-228ENST00000560975 IBA57Q5T440 356 aaKnown RBP13.64□□□□□ -0.23
TPM1-228ENST00000560975 SPINK14Q6IE38 97 aa13.64□□□□□ -0.23
TPM1-228ENST00000560975 OR4F17Q8NGA8 305 aa13.64□□□□□ -0.23
TPM1-228ENST00000560975 HSD17B10Q99714 261 aaKnown RBP13.64□□□□□ -0.23
TPM1-228ENST00000560975 NPVFQ9HCQ7 196 aa13.64□□□□□ -0.23
TPM1-228ENST00000560975 LY96Q9Y6Y9 160 aa13.64□□□□□ -0.23
TPM1-228ENST00000560975 IGHV1-69-2A0A0G2JMI3 117 aa13.63□□□□□ -0.23
TPM1-228ENST00000560975 IGFBP2P18065 325 aa13.63□□□□□ -0.23
TPM1-228ENST00000560975 GPR6P46095 362 aaPredicted RBP13.63□□□□□ -0.23
TPM1-228ENST00000560975 Q0VFX4 171 aa13.63□□□□□ -0.23
TPM1-228ENST00000560975 MORN2Q502X0 79 aa13.63□□□□□ -0.23
TPM1-228ENST00000560975 LDLRAD2Q5SZI1 272 aa13.63□□□□□ -0.23
TPM1-228ENST00000560975 RNASEKQ6P5S7 137 aaKnown RBP13.63□□□□□ -0.23
TPM1-228ENST00000560975 Q8TCH9 128 aa13.63□□□□□ -0.23
TPM1-228ENST00000560975 FAM168AQ92567 244 aa13.63□□□□□ -0.23
TPM1-228ENST00000560975 COQ2Q96H96 371 aa13.63□□□□□ -0.23
TPM1-228ENST00000560975 ZNF331Q9NQX6 463 aaPredicted RBP13.63□□□□□ -0.23
TPM1-228ENST00000560975 CLCF1Q9UBD9 225 aa13.63□□□□□ -0.23
TPM1-228ENST00000560975 PRSS46E5RG02 174 aa13.63□□□□□ -0.23
TPM1-228ENST00000560975 OR10J4P0C629 311 aa13.63□□□□□ -0.23
TPM1-228ENST00000560975 VDAC2P45880 294 aaPredicted RBP13.63□□□□□ -0.23
TPM1-228ENST00000560975 PMCHL1Q16048 86 aa13.63□□□□□ -0.23
TPM1-228ENST00000560975 KIR3DL3Q8N743 410 aa13.63□□□□□ -0.23
TPM1-228ENST00000560975 OR13A1Q8NGR1 328 aa13.63□□□□□ -0.23
TPM1-228ENST00000560975 OR2Y1Q8NGV0 311 aa13.63□□□□□ -0.23
TPM1-228ENST00000560975 CDX2Q99626 313 aaPredicted RBP13.63□□□□□ -0.23
TPM1-228ENST00000560975 IGKV3D-15A0A087WSY6 115 aa13.62□□□□□ -0.23
TPM1-228ENST00000560975 FAM181BA6NEQ2 426 aa13.62□□□□□ -0.23
TPM1-228ENST00000560975 SSPNQ14714 243 aa13.62□□□□□ -0.23
TPM1-228ENST00000560975 TEPPQ6URK8 271 aa13.62□□□□□ -0.23
TPM1-228ENST00000560975 MDP1Q86V88 176 aa13.62□□□□□ -0.23
TPM1-228ENST00000560975 GP6Q9HCN6 339 aa13.62□□□□□ -0.23
TPM1-228ENST00000560975 OSTCQ9NRP0 149 aa13.62□□□□□ -0.23
TPM1-228ENST00000560975 TECRQ9NZ01 308 aaKnown RBP13.62□□□□□ -0.23
TPM1-228ENST00000560975 METRNQ9UJH8 293 aa13.62□□□□□ -0.23
TPM1-228ENST00000560975 OR7C2O60412 319 aa13.62□□□□□ -0.23
TPM1-228ENST00000560975 CELA3BP08861 270 aa13.62□□□□□ -0.23
TPM1-228ENST00000560975 FOLR3P41439 243 aa13.62□□□□□ -0.23
TPM1-228ENST00000560975 SPATA12Q7Z6I5 190 aa13.62□□□□□ -0.23
TPM1-228ENST00000560975 NEUROG1Q92886 237 aa13.62□□□□□ -0.23
TPM1-228ENST00000560975 HINT2Q9BX68 163 aa13.62□□□□□ -0.23
TPM1-228ENST00000560975 CLEC5AQ9NY25 188 aa13.62□□□□□ -0.23
TPM1-228ENST00000560975 IL19Q9UHD0 177 aa13.62□□□□□ -0.23
TPM1-228ENST00000560975 GATA2P23769 480 aaPredicted RBP13.61□□□□□ -0.23
TPM1-228ENST00000560975 GPR12P47775 334 aa13.61□□□□□ -0.23
TPM1-228ENST00000560975 SELENOVP59797 346 aa13.61□□□□□ -0.23
TPM1-228ENST00000560975 MPV17L2Q567V2 206 aa13.61□□□□□ -0.23
TPM1-228ENST00000560975 OR2D3Q8NGH3 330 aa13.61□□□□□ -0.23
TPM1-228ENST00000560975 OR5B3Q8NH48 314 aa13.61□□□□□ -0.23
TPM1-228ENST00000560975 HES4Q9HCC6 221 aa13.61□□□□□ -0.23
TPM1-228ENST00000560975 LSM4Q9Y4Z0 139 aaKnown RBP13.61□□□□□ -0.23
TPM1-228ENST00000560975 REG1AP05451 166 aa13.61□□□□□ -0.23
TPM1-228ENST00000560975 RPL8P62917 257 aaKnown RBP13.61□□□□□ -0.23
TPM1-228ENST00000560975 MUC15Q8N387 334 aa13.61□□□□□ -0.23
TPM1-228ENST00000560975 SLC24A4Q8NFF2 622 aa13.61□□□□□ -0.23
TPM1-228ENST00000560975 SSBP4Q9BWG4 385 aaPredicted RBP13.61□□□□□ -0.23
TPM1-228ENST00000560975 PLEKHA3Q9HB20 300 aa13.61□□□□□ -0.23
TPM1-228ENST00000560975 M0R1X1 148 aa13.61□□□□□ -0.23
TPM1-228ENST00000560975 PROP1O75360 226 aa13.61□□□□□ -0.23
TPM1-228ENST00000560975 PSG1P11464 419 aa13.61□□□□□ -0.23
TPM1-228ENST00000560975 EDDM3AQ14507 147 aa13.61□□□□□ -0.23
TPM1-228ENST00000560975 DUTP33316 252 aaKnown RBP13.6□□□□□ -0.23
TPM1-228ENST00000560975 UBE2G1P62253 170 aa13.6□□□□□ -0.23
TPM1-228ENST00000560975 AARDQ4LEZ3 155 aa13.6□□□□□ -0.23
TPM1-228ENST00000560975 RPL39P5Q59GN2 51 aa13.6□□□□□ -0.23
TPM1-228ENST00000560975 SPACA3Q8IXA5 215 aa13.6□□□□□ -0.23
TPM1-228ENST00000560975 HES7Q9BYE0 225 aa13.6□□□□□ -0.23
TPM1-228ENST00000560975 TCF19Q9Y242 345 aa13.6□□□□□ -0.23
TPM1-228ENST00000560975 WASHC3Q9Y3C0 194 aa13.6□□□□□ -0.23
TPM1-228ENST00000560975 A0A1W2PN81 502 aa13.6□□□□□ -0.23
TPM1-228ENST00000560975 MYOD1P15172 320 aa13.6□□□□□ -0.23
TPM1-228ENST00000560975 CYB561P49447 251 aa13.6□□□□□ -0.23
TPM1-228ENST00000560975 MFAP2P55001 183 aa13.6□□□□□ -0.23
TPM1-228ENST00000560975 ERVK-16P61578 105 aa13.6□□□□□ -0.23
TPM1-228ENST00000560975 LINC00479Q96M42 142 aa13.6□□□□□ -0.23
TPM1-228ENST00000560975 OBP2BQ9NPH6 170 aa13.6□□□□□ -0.23
TPM1-228ENST00000560975 KNTC1P50748 2209 aa13.59□□□□□ -0.23
TPM1-228ENST00000560975 SMIM27A0A1W2PRY6 76 aa13.59□□□□□ -0.23
TPM1-228ENST00000560975 SH2D7A6NKC9 451 aaPredicted RBP13.59□□□□□ -0.23
TPM1-228ENST00000560975 ZNF891A8MT65 544 aaPredicted RBP13.59□□□□□ -0.23
TPM1-228ENST00000560975 GGTLC3B5MD39 225 aa13.59□□□□□ -0.23
TPM1-228ENST00000560975 CYC1P08574 325 aa13.59□□□□□ -0.23
TPM1-228ENST00000560975 AREGP15514 252 aa13.59□□□□□ -0.23
TPM1-228ENST00000560975 COX19Q49B96 90 aa13.59□□□□□ -0.23
TPM1-228ENST00000560975 SLC35E4Q6ICL7 350 aa13.59□□□□□ -0.23
TPM1-228ENST00000560975 MOB3BQ86TA1 216 aa13.59□□□□□ -0.23
TPM1-228ENST00000560975 ZNF596Q8TC21 504 aa13.59□□□□□ -0.23
TPM1-228ENST00000560975 TRAV30A0A087WSZ9 112 aa13.59□□□□□ -0.23
TPM1-228ENST00000560975 ISLRO14498 428 aa13.59□□□□□ -0.23
TPM1-228ENST00000560975 IGLV2-8P01709 118 aa13.59□□□□□ -0.23
TPM1-228ENST00000560975 RAB31Q13636 194 aa13.59□□□□□ -0.23
TPM1-228ENST00000560975 FAM214BQ7L5A3 538 aa13.59□□□□□ -0.23
TPM1-228ENST00000560975 PNKDQ8N490 385 aa13.59□□□□□ -0.23
TPM1-228ENST00000560975 TMEM140Q9NV12 185 aa13.59□□□□□ -0.23
TPM1-228ENST00000560975 LOXL2Q9Y4K0 774 aa13.59□□□□□ -0.23
TPM1-228ENST00000560975 IZUMO1RA6ND01 250 aa13.58□□□□□ -0.23
TPM1-228ENST00000560975 OR2T8A6NH00 312 aa13.58□□□□□ -0.23
TPM1-228ENST00000560975 H0YJW9 148 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms