RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 SLC51BQ86UW2 128 aa9□□□□□ -0.97
SNX1-212ENST00000560861 MMD2Q8IY49 270 aa9□□□□□ -0.97
SNX1-212ENST00000560861 OR1L8Q8NGR8 309 aa9□□□□□ -0.97
SNX1-212ENST00000560861 SLC25A31Q9H0C2 315 aa9□□□□□ -0.97
SNX1-212ENST00000560861 ARV1Q9H2C2 271 aa9□□□□□ -0.97
SNX1-212ENST00000560861 METTL1Q9UBP6 276 aaKnown RBP9□□□□□ -0.97
SNX1-212ENST00000560861 SONP18583 2426 aaKnown RBP9□□□□□ -0.97
SNX1-212ENST00000560861 PRSS46E5RG02 174 aa8.99□□□□□ -0.97
SNX1-212ENST00000560861 FCN1O00602 326 aa8.99□□□□□ -0.97
SNX1-212ENST00000560861 COMPP49747 757 aaPredicted RBP8.99□□□□□ -0.97
SNX1-212ENST00000560861 BPIFB3P59826 476 aa8.99□□□□□ -0.97
SNX1-212ENST00000560861 TMEM267Q0VDI3 215 aaPredicted RBP8.99□□□□□ -0.97
SNX1-212ENST00000560861 HNF4GQ14541 408 aa8.99□□□□□ -0.97
SNX1-212ENST00000560861 MMDQ15546 238 aa8.99□□□□□ -0.97
SNX1-212ENST00000560861 AANATQ16613 207 aa8.99□□□□□ -0.97
SNX1-212ENST00000560861 C5orf64Q2M2E5 130 aa8.99□□□□□ -0.97
SNX1-212ENST00000560861 TEX261Q6UWH6 196 aa8.99□□□□□ -0.97
SNX1-212ENST00000560861 PPP1R27Q86WC6 154 aa8.99□□□□□ -0.97
SNX1-212ENST00000560861 ST8SIA2Q92186 375 aa8.99□□□□□ -0.97
SNX1-212ENST00000560861 NUP50Q9UKX7 468 aa8.99□□□□□ -0.97
SNX1-212ENST00000560861 U3KQ87 197 aa8.99□□□□□ -0.97
SNX1-212ENST00000560861 F8P00451 2351 aa8.98□□□□□ -0.97
SNX1-212ENST00000560861 IGLC7A0M8Q6 106 aa8.98□□□□□ -0.97
SNX1-212ENST00000560861 CST7O76096 145 aa8.98□□□□□ -0.97
SNX1-212ENST00000560861 METTL15P1P0C7V9 234 aa8.98□□□□□ -0.97
SNX1-212ENST00000560861 RNASE2P10153 161 aaKnown RBP8.98□□□□□ -0.97
SNX1-212ENST00000560861 UBA52P62987 128 aaKnown RBP8.98□□□□□ -0.97
SNX1-212ENST00000560861 SPANXN5Q5MJ07 72 aa8.98□□□□□ -0.97
SNX1-212ENST00000560861 RPL7L1Q6DKI1 246 aaKnown RBP8.98□□□□□ -0.97
SNX1-212ENST00000560861 PVRIGQ6DKI7 326 aa8.98□□□□□ -0.97
SNX1-212ENST00000560861 Q8N9W7 124 aa8.98□□□□□ -0.97
SNX1-212ENST00000560861 ZNF680Q8NEM1 530 aa8.98□□□□□ -0.97
SNX1-212ENST00000560861 OR10W1Q8NGF6 305 aa8.98□□□□□ -0.97
SNX1-212ENST00000560861 OR8H1Q8NGG4 311 aa8.98□□□□□ -0.97
SNX1-212ENST00000560861 COMMD5Q9GZQ3 224 aa8.98□□□□□ -0.97
SNX1-212ENST00000560861 STRAPQ9Y3F4 350 aaKnown RBP8.98□□□□□ -0.97
SNX1-212ENST00000560861 HIVEP1P15822 2718 aa8.97□□□□□ -0.97
SNX1-212ENST00000560861 TEX22C9J3V5 150 aa8.97□□□□□ -0.97
SNX1-212ENST00000560861 CA2P00918 260 aa8.97□□□□□ -0.97
SNX1-212ENST00000560861 OPN1MWP04001 364 aa8.97□□□□□ -0.97
SNX1-212ENST00000560861 FBP1P09467 338 aa8.97□□□□□ -0.97
SNX1-212ENST00000560861 FAM106CPP0CH98 169 aa8.97□□□□□ -0.97
SNX1-212ENST00000560861 OPN1MW2P0DN77 364 aa8.97□□□□□ -0.97
SNX1-212ENST00000560861 OPN1MW3P0DN78 364 aa8.97□□□□□ -0.97
SNX1-212ENST00000560861 TMEM11P17152 192 aa8.97□□□□□ -0.97
SNX1-212ENST00000560861 RPL27AP46776 148 aaKnown RBP8.97□□□□□ -0.97
SNX1-212ENST00000560861 HOXA1P49639 335 aaPredicted RBP8.97□□□□□ -0.97
SNX1-212ENST00000560861 WT1-ASQ06250 92 aa8.97□□□□□ -0.97
SNX1-212ENST00000560861 HES1Q14469 280 aa8.97□□□□□ -0.97
SNX1-212ENST00000560861 VWC2Q2TAL6 325 aa8.97□□□□□ -0.97
SNX1-212ENST00000560861 LRRC75BQ2VPJ9 315 aa8.97□□□□□ -0.97
SNX1-212ENST00000560861 STX12Q86Y82 276 aa8.97□□□□□ -0.97
SNX1-212ENST00000560861 BCL6BQ8N143 479 aaPredicted RBP8.97□□□□□ -0.97
SNX1-212ENST00000560861 UBAC2Q8NBM4 344 aa8.97□□□□□ -0.97
SNX1-212ENST00000560861 SLC24A4Q8NFF2 622 aa8.97□□□□□ -0.97
SNX1-212ENST00000560861 OR5C1Q8NGR4 320 aa8.97□□□□□ -0.97
SNX1-212ENST00000560861 ZNF471Q9BX82 626 aaPredicted RBP8.97□□□□□ -0.97
SNX1-212ENST00000560861 SMIM3Q9BZL3 60 aa8.97□□□□□ -0.97
SNX1-212ENST00000560861 PRDM13Q9H4Q3 707 aa8.97□□□□□ -0.97
SNX1-212ENST00000560861 PLEKHA3Q9HB20 300 aa8.97□□□□□ -0.97
SNX1-212ENST00000560861 HEYLQ9NQ87 328 aaPredicted RBP8.97□□□□□ -0.97
SNX1-212ENST00000560861 ZFHX3Q15911 3703 aa8.97□□□□□ -0.97
SNX1-212ENST00000560861 A0A1W2PN81 502 aa8.96□□□□□ -0.98
SNX1-212ENST00000560861 A6NDX4 124 aa8.96□□□□□ -0.98
SNX1-212ENST00000560861 CD5LO43866 347 aa8.96□□□□□ -0.98
SNX1-212ENST00000560861 MDKP21741 143 aaPredicted RBP8.96□□□□□ -0.98
SNX1-212ENST00000560861 NPY1RP25929 384 aa8.96□□□□□ -0.98
SNX1-212ENST00000560861 CHRNA7P36544 502 aa8.96□□□□□ -0.98
SNX1-212ENST00000560861 ATP5IP56385 69 aaPredicted RBP8.96□□□□□ -0.98
SNX1-212ENST00000560861 NDPQ00604 133 aa8.96□□□□□ -0.98
SNX1-212ENST00000560861 EXOSC2Q13868 293 aaKnown RBP8.96□□□□□ -0.98
SNX1-212ENST00000560861 TNXAQ16473 311 aa8.96□□□□□ -0.98
SNX1-212ENST00000560861 C2orf83Q53S99 150 aa8.96□□□□□ -0.98
SNX1-212ENST00000560861 ZNF767PQ75MW2 155 aa8.96□□□□□ -0.98
SNX1-212ENST00000560861 ZNF114Q8NC26 417 aa8.96□□□□□ -0.98
SNX1-212ENST00000560861 OR1S2Q8NGQ3 325 aa8.96□□□□□ -0.98
SNX1-212ENST00000560861 SRSF12Q8WXF0 261 aaKnown RBP8.96□□□□□ -0.98
SNX1-212ENST00000560861 RBM14Q96PK6 669 aaKnown RBP8.96□□□□□ -0.98
SNX1-212ENST00000560861 ATP5SQ99766 215 aa8.96□□□□□ -0.98
SNX1-212ENST00000560861 SRSF8Q9BRL6 282 aaKnown RBP8.96□□□□□ -0.98
SNX1-212ENST00000560861 HINT2Q9BX68 163 aa8.96□□□□□ -0.98
SNX1-212ENST00000560861 HIPK2Q9H2X6 1198 aa8.96□□□□□ -0.98
SNX1-212ENST00000560861 ZC4H2Q9NQZ6 224 aa8.96□□□□□ -0.98
SNX1-212ENST00000560861 KIAA1456Q9P272 454 aa8.96□□□□□ -0.98
SNX1-212ENST00000560861 ITGB1BP2Q9UKP3 347 aa8.96□□□□□ -0.98
SNX1-212ENST00000560861 MXRA5Q9NR99 2828 aa8.95□□□□□ -0.98
SNX1-212ENST00000560861 MDFIC2A0A1B0GVS7 189 aa8.95□□□□□ -0.98
SNX1-212ENST00000560861 SMAD7O15105 426 aaKnown RBP8.95□□□□□ -0.98
SNX1-212ENST00000560861 JTBO76095 146 aa8.95□□□□□ -0.98
SNX1-212ENST00000560861 SCAF4O95104 1147 aaKnown RBP8.95□□□□□ -0.98
SNX1-212ENST00000560861 HLA-DRB1P01911 266 aa8.95□□□□□ -0.98
SNX1-212ENST00000560861 AMY1AP04745 511 aa8.95□□□□□ -0.98
SNX1-212ENST00000560861 TPT1P13693 172 aaKnown RBP8.95□□□□□ -0.98
SNX1-212ENST00000560861 HTR2BP41595 481 aa8.95□□□□□ -0.98
SNX1-212ENST00000560861 SLC38A11Q08AI6 406 aa8.95□□□□□ -0.98
SNX1-212ENST00000560861 CLINT1Q14677 625 aa8.95□□□□□ -0.98
SNX1-212ENST00000560861 DEFB112Q30KQ8 113 aa8.95□□□□□ -0.98
SNX1-212ENST00000560861 ZNF562Q6V9R5 426 aa8.95□□□□□ -0.98
SNX1-212ENST00000560861 BAP18Q8IXM2 172 aa8.95□□□□□ -0.98
SNX1-212ENST00000560861 TMEM217Q8N7C4 229 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms