RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 TMPRSS3P57727 454 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 BRWD1-AS2P59051 145 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 KRTAP10-8P60410 259 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 SPCS3P61009 180 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 UBE2NP61088 152 aaKnown RBP2.01□□□□□ -2.09
SPG11-223ENST00000560858 ERVS71-1P61550 626 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 SELENOTP62341 195 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 GNB2P62879 340 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 RPL30P62888 115 aaKnown RBP2.01□□□□□ -2.09
SPG11-223ENST00000560858 HNF4GQ14541 408 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 SLC10A1Q14973 349 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 GUSBP1Q15486 140 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 OR1C1Q15619 314 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 IGFBP7Q16270 282 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 IQCJQ1A5X6 159 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 TBC1D28Q2M2D7 210 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 Q3ZCU0 254 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 PDZD11Q5EBL8 140 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 SPANXN5Q5MJ07 72 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 FFAR4Q5NUL3 377 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 DCAF12Q5T6F0 453 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 SLC35E4Q6ICL7 350 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 KCNIP4Q6PIL6 250 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 TRAT1Q6PIZ9 186 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 TIPARPQ7Z3E1 657 aaKnown RBP2.01□□□□□ -2.09
SPG11-223ENST00000560858 LINC01551Q86U37 167 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 MDP1Q86V88 176 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 TUSC5Q8IXB3 177 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 ZNF664Q8N3J9 261 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 FGFRL1Q8N441 504 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 TMEM251Q8N6I4 163 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 SCCPDHQ8NBX0 429 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 MDS2Q8NDY4 140 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 OR10G9Q8NGN4 311 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 OR10G7Q8NGN6 311 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 OR2T10Q8NGZ9 312 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 DTD1Q8TEA8 209 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 TMEM18Q96B42 140 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 RPUSD4Q96CM3 377 aaKnown RBP2.01□□□□□ -2.09
SPG11-223ENST00000560858 COQ2Q96H96 371 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 GMPPAQ96IJ6 420 aaPredicted RBP2.01□□□□□ -2.09
SPG11-223ENST00000560858 UHRF2Q96PU4 802 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 OR5B12Q96R08 314 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 HSD17B10Q99714 261 aaKnown RBP2.01□□□□□ -2.09
SPG11-223ENST00000560858 TTTY12Q9BZ98 90 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 OR2D2Q9H210 308 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 PRO3102Q9H379 93 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 FSCN3Q9NQT6 498 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 KCNIP2Q9NS61 270 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.01□□□□□ -2.09
SPG11-223ENST00000560858 SLC39A9Q9NUM3 307 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 ABI3Q9P2A4 366 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 CLCF1Q9UBD9 225 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 TRAPPC2LQ9UL33 140 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 PPP1R3CQ9UQK1 317 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 KLF13Q9Y2Y9 288 aaPredicted RBP2.01□□□□□ -2.09
SPG11-223ENST00000560858 LOXL2Q9Y4K0 774 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 LY96Q9Y6Y9 160 aa2.01□□□□□ -2.09
SPG11-223ENST00000560858 DNAH14Q0VDD8 3507 aa2□□□□□ -2.09
SPG11-223ENST00000560858 TRBV9A0A0B4J1U6 114 aa2□□□□□ -2.09
SPG11-223ENST00000560858 TRAV39A0A0B4J263 110 aa2□□□□□ -2.09
SPG11-223ENST00000560858 MDFIC2A0A1B0GVS7 189 aa2□□□□□ -2.09
SPG11-223ENST00000560858 FAM166BA8MTA8 275 aa2□□□□□ -2.09
SPG11-223ENST00000560858 C17orf98A8MV24 154 aa2□□□□□ -2.09
SPG11-223ENST00000560858 C21orf140B9A014 251 aa2□□□□□ -2.09
SPG11-223ENST00000560858 C15orf65H3BRN8 121 aa2□□□□□ -2.09
SPG11-223ENST00000560858 IFNL4K9M1U5 179 aa2□□□□□ -2.09
SPG11-223ENST00000560858 ITGB1BP1O14713 200 aa2□□□□□ -2.09
SPG11-223ENST00000560858 CDIPTO14735 213 aa2□□□□□ -2.09
SPG11-223ENST00000560858 SH2D1BO14796 132 aa2□□□□□ -2.09
SPG11-223ENST00000560858 ZNHIT1O43257 154 aa2□□□□□ -2.09
SPG11-223ENST00000560858 YPEL1O60688 119 aa2□□□□□ -2.09
SPG11-223ENST00000560858 PAGE4O60829 102 aa2□□□□□ -2.09
SPG11-223ENST00000560858 TRAPPC6AO75865 159 aa2□□□□□ -2.09
SPG11-223ENST00000560858 TNFSF15O95150 251 aa2□□□□□ -2.09
SPG11-223ENST00000560858 NXPH2O95156 264 aa2□□□□□ -2.09
SPG11-223ENST00000560858 IGKV3-15P01624 115 aa2□□□□□ -2.09
SPG11-223ENST00000560858 APOHP02749 345 aaPredicted RBP2□□□□□ -2.09
SPG11-223ENST00000560858 SNRPCP09234 159 aaKnown RBP2□□□□□ -2.09
SPG11-223ENST00000560858 OR10J4P0C629 311 aa2□□□□□ -2.09
SPG11-223ENST00000560858 OR9G9P0C7N8 305 aa2□□□□□ -2.09
SPG11-223ENST00000560858 SELLP14151 372 aa2□□□□□ -2.09
SPG11-223ENST00000560858 AREGP15514 252 aa2□□□□□ -2.09
SPG11-223ENST00000560858 RAB4AP20338 218 aa2□□□□□ -2.09
SPG11-223ENST00000560858 KITLGP21583 273 aa2□□□□□ -2.09
SPG11-223ENST00000560858 CCNOP22674 350 aa2□□□□□ -2.09
SPG11-223ENST00000560858 TUBG1P23258 451 aa2□□□□□ -2.09
SPG11-223ENST00000560858 CD82P27701 267 aa2□□□□□ -2.09
SPG11-223ENST00000560858 DUTP33316 252 aaKnown RBP2□□□□□ -2.09
SPG11-223ENST00000560858 G6PCP35575 357 aa2□□□□□ -2.09
SPG11-223ENST00000560858 CFHR2P36980 270 aa2□□□□□ -2.09
SPG11-223ENST00000560858 OPRK1P41145 380 aa2□□□□□ -2.09
SPG11-223ENST00000560858 MAGEA5P43359 124 aa2□□□□□ -2.09
SPG11-223ENST00000560858 KIR2DS2P43631 304 aa2□□□□□ -2.09
SPG11-223ENST00000560858 VDAC2P45880 294 aaPredicted RBP2□□□□□ -2.09
SPG11-223ENST00000560858 OR3A1P47881 315 aa2□□□□□ -2.09
SPG11-223ENST00000560858 ATP5G3P48201 142 aa2□□□□□ -2.09
SPG11-223ENST00000560858 CEBPDP49716 269 aaPredicted RBP2□□□□□ -2.09
SPG11-223ENST00000560858 IDH3GP51553 393 aaPredicted RBP2□□□□□ -2.09
SPG11-223ENST00000560858 YPEL3P61236 119 aaPredicted RBP2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms