RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 RPL18Q07020 188 aaKnown RBP0.57□□□□□ -2.32
PSMA4-221ENST00000560842 SYPL2Q5VXT5 272 aa0.57□□□□□ -2.32
PSMA4-221ENST00000560842 KRTAP19-3Q7Z4W3 81 aa0.57□□□□□ -2.32
PSMA4-221ENST00000560842 ATP6V1G3Q96LB4 118 aa0.57□□□□□ -2.32
PSMA4-221ENST00000560842 MAP1LC3AQ9H492 121 aa0.57□□□□□ -2.32
PSMA4-221ENST00000560842 FKBP14Q9NWM8 211 aa0.57□□□□□ -2.32
PSMA4-221ENST00000560842 PAQR5Q9NXK6 330 aaPredicted RBP0.57□□□□□ -2.32
PSMA4-221ENST00000560842 DCCP43146 1447 aa0.56□□□□□ -2.32
PSMA4-221ENST00000560842 ARFGEF3Q5TH69 2177 aa0.56□□□□□ -2.32
PSMA4-221ENST00000560842 C1orf232A0A0U1RR37 186 aa0.56□□□□□ -2.32
PSMA4-221ENST00000560842 TMEM212A6NML5 194 aa0.56□□□□□ -2.32
PSMA4-221ENST00000560842 GOLGA8KD6RF30 607 aa0.56□□□□□ -2.32
PSMA4-221ENST00000560842 GOLGA8MH3BSY2 632 aa0.56□□□□□ -2.32
PSMA4-221ENST00000560842 TYMSP04818 313 aa0.56□□□□□ -2.32
PSMA4-221ENST00000560842 SUPT4H1P63272 117 aaKnown RBP0.56□□□□□ -2.32
PSMA4-221ENST00000560842 CAV1Q03135 178 aa0.56□□□□□ -2.32
PSMA4-221ENST00000560842 FABP9Q0Z7S8 132 aa0.56□□□□□ -2.32
PSMA4-221ENST00000560842 BATFQ16520 125 aa0.56□□□□□ -2.32
PSMA4-221ENST00000560842 HIST2H3AQ71DI3 136 aa0.56□□□□□ -2.32
PSMA4-221ENST00000560842 SLC51BQ86UW2 128 aa0.56□□□□□ -2.32
PSMA4-221ENST00000560842 DEFB125Q8N687 156 aa0.56□□□□□ -2.32
PSMA4-221ENST00000560842 OR4C6Q8NH72 309 aa0.56□□□□□ -2.32
PSMA4-221ENST00000560842 AQP3Q92482 292 aa0.56□□□□□ -2.32
PSMA4-221ENST00000560842 CMTM5Q96DZ9 223 aa0.56□□□□□ -2.32
PSMA4-221ENST00000560842 ERMAPQ96PL5 475 aaPredicted RBP0.56□□□□□ -2.32
PSMA4-221ENST00000560842 LOC110117498A0A087WWA1 95 aa0.55□□□□□ -2.32
PSMA4-221ENST00000560842 SSNA1O43805 119 aa0.55□□□□□ -2.32
PSMA4-221ENST00000560842 YEATS4O95619 227 aa0.55□□□□□ -2.32
PSMA4-221ENST00000560842 SHBGP04278 402 aa0.55□□□□□ -2.32
PSMA4-221ENST00000560842 UBBP0CG47 229 aa0.55□□□□□ -2.32
PSMA4-221ENST00000560842 MAP3K7CLP57077 242 aa0.55□□□□□ -2.32
PSMA4-221ENST00000560842 COMMD7Q86VX2 200 aa0.55□□□□□ -2.32
PSMA4-221ENST00000560842 GPR32P1Q8NGA4 272 aa0.55□□□□□ -2.32
PSMA4-221ENST00000560842 C11orf40Q8WZ69 217 aa0.55□□□□□ -2.32
PSMA4-221ENST00000560842 SERPINI1Q99574 410 aa0.55□□□□□ -2.32
PSMA4-221ENST00000560842 MRPL57Q9BQC6 102 aaKnown RBP0.55□□□□□ -2.32
PSMA4-221ENST00000560842 IL36BQ9NZH7 164 aa0.55□□□□□ -2.32
PSMA4-221ENST00000560842 OR5AC2Q9NZP5 309 aa0.55□□□□□ -2.32
PSMA4-221ENST00000560842 C15orf41Q9Y2V0 281 aa0.55□□□□□ -2.32
PSMA4-221ENST00000560842 EXPH5Q8NEV8 1989 aa0.55□□□□□ -2.32
PSMA4-221ENST00000560842 HEATR5AQ86XA9 2040 aa0.55□□□□□ -2.32
PSMA4-221ENST00000560842 RALGAPA2Q2PPJ7 1873 aa0.54□□□□□ -2.32
PSMA4-221ENST00000560842 RPL12P30050 165 aaKnown RBP0.54□□□□□ -2.32
PSMA4-221ENST00000560842 MAP2K4P45985 399 aa0.54□□□□□ -2.32
PSMA4-221ENST00000560842 SKP1P63208 163 aa0.54□□□□□ -2.32
PSMA4-221ENST00000560842 DMTNQ08495 405 aa0.54□□□□□ -2.32
PSMA4-221ENST00000560842 MLLT11Q13015 90 aaPredicted RBP0.54□□□□□ -2.32
PSMA4-221ENST00000560842 TMED1Q13445 227 aa0.54□□□□□ -2.32
PSMA4-221ENST00000560842 IBA57Q5T440 356 aaKnown RBP0.54□□□□□ -2.32
PSMA4-221ENST00000560842 ZNF826PQ6ZT77 177 aa0.54□□□□□ -2.32
PSMA4-221ENST00000560842 TMEM156Q8N614 296 aa0.54□□□□□ -2.32
PSMA4-221ENST00000560842 LAMA4Q16363 1823 aa0.53□□□□□ -2.32
PSMA4-221ENST00000560842 GGT3PA6NGU5 568 aa0.53□□□□□ -2.32
PSMA4-221ENST00000560842 PFDN6O15212 129 aa0.53□□□□□ -2.32
PSMA4-221ENST00000560842 MYL12AP19105 171 aa0.53□□□□□ -2.32
PSMA4-221ENST00000560842 MARCKSL1P49006 195 aa0.53□□□□□ -2.32
PSMA4-221ENST00000560842 UBE2IP63279 158 aaKnown RBP0.53□□□□□ -2.32
PSMA4-221ENST00000560842 CCL20P78556 96 aa0.53□□□□□ -2.32
PSMA4-221ENST00000560842 RSU1Q15404 277 aa0.53□□□□□ -2.32
PSMA4-221ENST00000560842 GLT8D1Q68CQ7 371 aa0.53□□□□□ -2.32
PSMA4-221ENST00000560842 DIRAS2Q96HU8 199 aa0.53□□□□□ -2.32
PSMA4-221ENST00000560842 UPF3BQ9BZI7 483 aaKnown RBP0.53□□□□□ -2.32
PSMA4-221ENST00000560842 EFCAB1Q9HAE3 211 aa0.53□□□□□ -2.32
PSMA4-221ENST00000560842 A0A087WX48 190 aa0.52□□□□□ -2.33
PSMA4-221ENST00000560842 TRAV14DV4A0A0A6YYC5 116 aa0.52□□□□□ -2.33
PSMA4-221ENST00000560842 FABP5P3A8MUU1 101 aa0.52□□□□□ -2.33
PSMA4-221ENST00000560842 C21orf140B9A014 251 aa0.52□□□□□ -2.33
PSMA4-221ENST00000560842 PRM2P04554 102 aa0.52□□□□□ -2.33
PSMA4-221ENST00000560842 COX5BP10606 129 aa0.52□□□□□ -2.33
PSMA4-221ENST00000560842 KCNE1P15382 129 aa0.52□□□□□ -2.33
PSMA4-221ENST00000560842 RPS4Y1P22090 263 aaKnown RBP0.52□□□□□ -2.33
PSMA4-221ENST00000560842 C1orf195Q5TG92 126 aa0.52□□□□□ -2.33
PSMA4-221ENST00000560842 LINC00526Q96FQ7 95 aa0.52□□□□□ -2.33
PSMA4-221ENST00000560842 C3orf18Q9UK00 162 aa0.52□□□□□ -2.33
PSMA4-221ENST00000560842 ANAPC1Q9H1A4 1944 aa0.52□□□□□ -2.33
PSMA4-221ENST00000560842 FUOMA2VDF0 154 aa0.51□□□□□ -2.33
PSMA4-221ENST00000560842 CXCR6O00574 342 aa0.51□□□□□ -2.33
PSMA4-221ENST00000560842 ADGRB2O60241 1585 aa0.51□□□□□ -2.33
PSMA4-221ENST00000560842 CDK10Q15131 360 aa0.51□□□□□ -2.33
PSMA4-221ENST00000560842 KISS1Q15726 138 aa0.51□□□□□ -2.33
PSMA4-221ENST00000560842 LRRN1Q6UXK5 716 aa0.51□□□□□ -2.33
PSMA4-221ENST00000560842 FAM9CQ8IZT9 166 aa0.51□□□□□ -2.33
PSMA4-221ENST00000560842 TTC21AQ8NDW8 1320 aa0.51□□□□□ -2.33
PSMA4-221ENST00000560842 OR5B17Q8NGF7 314 aa0.51□□□□□ -2.33
PSMA4-221ENST00000560842 RASSF5Q8WWW0 418 aa0.51□□□□□ -2.33
PSMA4-221ENST00000560842 CNBD2Q96M20 576 aa0.51□□□□□ -2.33
PSMA4-221ENST00000560842 HDHD2Q9H0R4 259 aa0.51□□□□□ -2.33
PSMA4-221ENST00000560842 MUC5BQ9HC84 5762 aaPredicted RBP0.51□□□□□ -2.33
PSMA4-221ENST00000560842 NAA20P61599 178 aa0.5□□□□□ -2.33
PSMA4-221ENST00000560842 STX5Q13190 355 aa0.5□□□□□ -2.33
PSMA4-221ENST00000560842 CLVS2Q5SYC1 327 aa0.5□□□□□ -2.33
PSMA4-221ENST00000560842 LCN15Q6UWW0 184 aa0.5□□□□□ -2.33
PSMA4-221ENST00000560842 DEFB128Q7Z7B8 93 aa0.5□□□□□ -2.33
PSMA4-221ENST00000560842 PFN4Q8NHR9 129 aa0.5□□□□□ -2.33
PSMA4-221ENST00000560842 PIGXQ8TBF5 258 aa0.5□□□□□ -2.33
PSMA4-221ENST00000560842 CISHQ9NSE2 258 aa0.5□□□□□ -2.33
PSMA4-221ENST00000560842 ALPK2Q86TB3 2170 aa0.5□□□□□ -2.33
PSMA4-221ENST00000560842 A0A0J9YY10 115 aa0.49□□□□□ -2.33
PSMA4-221ENST00000560842 A0A1B0GX78 115 aa0.49□□□□□ -2.33
PSMA4-221ENST00000560842 EVPLLA8MZ36 301 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms