RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 IGHV3-74A0A0B4J1X5 117 aa11.4□□□□□ -0.58
TRAF3-208ENST00000560371 ELF5Q9UKW6 265 aaPredicted RBP11.4□□□□□ -0.58
TRAF3-208ENST00000560371 IGHV3-49A0A0A0MS15 119 aa11.4□□□□□ -0.59
TRAF3-208ENST00000560371 M0R143 59 aa11.4□□□□□ -0.59
TRAF3-208ENST00000560371 NTN3O00634 580 aaPredicted RBP11.4□□□□□ -0.59
TRAF3-208ENST00000560371 CLDND2Q8NHS1 167 aa11.4□□□□□ -0.59
TRAF3-208ENST00000560371 SLC25A38Q96DW6 304 aa11.4□□□□□ -0.59
TRAF3-208ENST00000560371 C7orf66A4D0T2 115 aa11.39□□□□□ -0.59
TRAF3-208ENST00000560371 TMEM14DPA8MWL7 114 aa11.39□□□□□ -0.59
TRAF3-208ENST00000560371 ZNF837Q96EG3 531 aaPredicted RBP11.39□□□□□ -0.59
TRAF3-208ENST00000560371 SIP14410 1827 aa11.39□□□□□ -0.59
TRAF3-208ENST00000560371 ANOS1P23352 680 aa11.39□□□□□ -0.59
TRAF3-208ENST00000560371 EMP1P54849 157 aa11.39□□□□□ -0.59
TRAF3-208ENST00000560371 UCP3P55916 312 aa11.39□□□□□ -0.59
TRAF3-208ENST00000560371 KBTBD11-OT1A0A1B0GTJ5 212 aa11.39□□□□□ -0.59
TRAF3-208ENST00000560371 OR4A47Q6IF82 309 aa11.39□□□□□ -0.59
TRAF3-208ENST00000560371 RTN4RL2Q86UN3 420 aa11.39□□□□□ -0.59
TRAF3-208ENST00000560371 RAB24Q969Q5 203 aa11.39□□□□□ -0.59
TRAF3-208ENST00000560371 IQCF6A8MYZ5 107 aa11.39□□□□□ -0.59
TRAF3-208ENST00000560371 HIST1H1AQ02539 215 aaPredicted RBP11.39□□□□□ -0.59
TRAF3-208ENST00000560371 TMEM177Q53S58 311 aa11.39□□□□□ -0.59
TRAF3-208ENST00000560371 STPG2Q8N412 459 aa11.39□□□□□ -0.59
TRAF3-208ENST00000560371 RPS20P60866 119 aaKnown RBP11.39□□□□□ -0.59
TRAF3-208ENST00000560371 FAM74A4Q5TZK3 123 aa11.39□□□□□ -0.59
TRAF3-208ENST00000560371 A0A1W2PRX2 142 aa11.38□□□□□ -0.59
TRAF3-208ENST00000560371 AMY1AP04745 511 aa11.38□□□□□ -0.59
TRAF3-208ENST00000560371 IGKV1D-43A0A0B4J1Z2 117 aa11.38□□□□□ -0.59
TRAF3-208ENST00000560371 PLXNB1O43157 2135 aa11.38□□□□□ -0.59
TRAF3-208ENST00000560371 MEF2CQ06413 473 aaPredicted RBP11.38□□□□□ -0.59
TRAF3-208ENST00000560371 TRAV20A0A0B4J274 112 aa11.38□□□□□ -0.59
TRAF3-208ENST00000560371 PRSS2P07478 247 aa11.38□□□□□ -0.59
TRAF3-208ENST00000560371 C1QL1O75973 258 aa11.38□□□□□ -0.59
TRAF3-208ENST00000560371 C2orf83Q53S99 150 aa11.38□□□□□ -0.59
TRAF3-208ENST00000560371 AQP10Q96PS8 301 aa11.38□□□□□ -0.59
TRAF3-208ENST00000560371 LINC00312Q9Y6C7 94 aa11.38□□□□□ -0.59
TRAF3-208ENST00000560371 C1QL2Q7Z5L3 287 aa11.38□□□□□ -0.59
TRAF3-208ENST00000560371 ARPC1AQ92747 370 aa11.38□□□□□ -0.59
TRAF3-208ENST00000560371 RPS11P62280 158 aaKnown RBP eCLIP11.38□□□□□ -0.59
TRAF3-208ENST00000560371 PPP1R27Q86WC6 154 aa11.38□□□□□ -0.59
TRAF3-208ENST00000560371 ITLN2Q8WWU7 325 aaPredicted RBP11.38□□□□□ -0.59
TRAF3-208ENST00000560371 HTN3P15516 51 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 ZNF343Q6P1L6 599 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 SMIM8Q96KF7 97 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 SPRR3Q9UBC9 169 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 FBXL7Q9UJT9 491 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 C12orf77C9JDV5 145 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 IGHV3-23P01764 117 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 TBR1Q16650 682 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 LINC00305Q7Z4B0 112 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 FAM90A1Q86YD7 464 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 FBLIM1Q8WUP2 373 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 SRSF12Q8WXF0 261 aaKnown RBP11.37□□□□□ -0.59
TRAF3-208ENST00000560371 METRNQ9UJH8 293 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 EML6Q6ZMW3 1958 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 IFITM10A6NMD0 228 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 ZNF56Q15929 161 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 MEIG1Q5JSS6 88 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 ZCCHC24Q8N2G6 241 aaKnown RBP11.37□□□□□ -0.59
TRAF3-208ENST00000560371 PGLYRP4Q96LB8 373 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 NABP2Q9BQ15 211 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 PRR14LQ5THK1 2151 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 H0YL77 283 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 MOSP00540 346 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 GOLT1AQ6ZVE7 132 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 SPSB4Q96A44 273 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 ATG101Q9BSB4 218 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 GPR183P32249 361 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 AICDAQ9GZX7 198 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 TRGC1P0CF51 173 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 UNQ6494/PRO21346Q6UXR6 183 aa11.37□□□□□ -0.59
TRAF3-208ENST00000560371 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.37□□□□□ -0.59
TRAF3-208ENST00000560371 NPDC1Q9NQX5 325 aaPredicted RBP11.37□□□□□ -0.59
TRAF3-208ENST00000560371 S4R3C0 116 aa11.36□□□□□ -0.59
TRAF3-208ENST00000560371 H3BTX0 84 aa11.36□□□□□ -0.59
TRAF3-208ENST00000560371 FAM3BP58499 235 aaPredicted RBP11.36□□□□□ -0.59
TRAF3-208ENST00000560371 CBLN2Q8IUK8 224 aa11.36□□□□□ -0.59
TRAF3-208ENST00000560371 MBNL2Q5VZF2 373 aaKnown RBP11.36□□□□□ -0.59
TRAF3-208ENST00000560371 GATAD1Q8WUU5 269 aa11.36□□□□□ -0.59
TRAF3-208ENST00000560371 MRPL32Q9BYC8 188 aaKnown RBP11.36□□□□□ -0.59
TRAF3-208ENST00000560371 SEMA5BQ9P283 1151 aa11.36□□□□□ -0.59
TRAF3-208ENST00000560371 PLXNA4Q9HCM2 1894 aa11.36□□□□□ -0.59
TRAF3-208ENST00000560371 REC114Q7Z4M0 266 aa11.36□□□□□ -0.59
TRAF3-208ENST00000560371 IGHV3-66A0A0C4DH42 116 aa11.36□□□□□ -0.59
TRAF3-208ENST00000560371 CSRP3P50461 194 aa11.36□□□□□ -0.59
TRAF3-208ENST00000560371 FOXA2Q9Y261 457 aaPredicted RBP11.36□□□□□ -0.59
TRAF3-208ENST00000560371 FOXI3A8MTJ6 420 aaPredicted RBP11.35□□□□□ -0.59
TRAF3-208ENST00000560371 WDR25Q64LD2 544 aaPredicted RBP11.35□□□□□ -0.59
TRAF3-208ENST00000560371 MAP1LC3AQ9H492 121 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 C21orf62Q9NYP8 219 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 FRMPD3Q5JV73 1810 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 MSGN1A6NI15 193 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 CFHR1Q03591 330 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 CDC42EP3Q9UKI2 254 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 ADAMTS9Q9P2N4 1935 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 PROB1E7EW31 1015 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 CRYBB3P26998 211 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 DEPPQ9NTK1 212 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 CEACAM4O75871 244 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 COX6CP09669 75 aa11.35□□□□□ -0.59
TRAF3-208ENST00000560371 TCF24Q7RTU0 167 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms