RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 OR13C7P0DN81 318 aa8.86□□□□□ -0.99
RABGGTA-216ENST00000560243 DEFA4P12838 97 aa8.86□□□□□ -0.99
RABGGTA-216ENST00000560243 TBPP20226 339 aa8.86□□□□□ -0.99
RABGGTA-216ENST00000560243 S100GP29377 79 aa8.86□□□□□ -0.99
RABGGTA-216ENST00000560243 MFAP2P55001 183 aa8.86□□□□□ -0.99
RABGGTA-216ENST00000560243 PIGPP57054 158 aa8.86□□□□□ -0.99
RABGGTA-216ENST00000560243 IZUMO4Q1ZYL8 232 aa8.86□□□□□ -0.99
RABGGTA-216ENST00000560243 STEAP1BQ6NZ63 245 aa8.86□□□□□ -0.99
RABGGTA-216ENST00000560243 ARRDC1Q8N5I2 433 aa8.86□□□□□ -0.99
RABGGTA-216ENST00000560243 OR1L8Q8NGR8 309 aa8.86□□□□□ -0.99
RABGGTA-216ENST00000560243 C15orf40Q8WUR7 153 aa8.86□□□□□ -0.99
RABGGTA-216ENST00000560243 SMIM4Q8WVI0 70 aa8.86□□□□□ -0.99
RABGGTA-216ENST00000560243 SEC22AQ96IW7 307 aa8.86□□□□□ -0.99
RABGGTA-216ENST00000560243 TP53RKQ96S44 253 aa8.86□□□□□ -0.99
RABGGTA-216ENST00000560243 ZC4H2Q9NQZ6 224 aa8.86□□□□□ -0.99
RABGGTA-216ENST00000560243 NDUFA4L2Q9NRX3 87 aa8.86□□□□□ -0.99
RABGGTA-216ENST00000560243 OR51B2Q9Y5P1 312 aa8.86□□□□□ -0.99
RABGGTA-216ENST00000560243 IZUMO1RA6ND01 250 aa8.85□□□□□ -0.99
RABGGTA-216ENST00000560243 NOL3O60936 208 aaKnown RBP8.85□□□□□ -0.99
RABGGTA-216ENST00000560243 SNAPC5O75971 98 aa8.85□□□□□ -0.99
RABGGTA-216ENST00000560243 DHFRP00374 187 aa8.85□□□□□ -0.99
RABGGTA-216ENST00000560243 HIST1H1BP16401 226 aaKnown RBP8.85□□□□□ -0.99
RABGGTA-216ENST00000560243 PTBP1P26599 531 aaKnown RBP eCLIP8.85□□□□□ -0.99
RABGGTA-216ENST00000560243 TNFSF8P32971 234 aa8.85□□□□□ -0.99
RABGGTA-216ENST00000560243 TAS2R19P59542 299 aa8.85□□□□□ -0.99
RABGGTA-216ENST00000560243 RND3P61587 244 aa8.85□□□□□ -0.99
RABGGTA-216ENST00000560243 DCTN2Q13561 401 aaKnown RBP8.85□□□□□ -0.99
RABGGTA-216ENST00000560243 IL18Q14116 193 aa8.85□□□□□ -0.99
RABGGTA-216ENST00000560243 SCGB2B2Q4G0G5 96 aa8.85□□□□□ -0.99
RABGGTA-216ENST00000560243 CADM3Q8N126 398 aa8.85□□□□□ -0.99
RABGGTA-216ENST00000560243 GDPD1Q8N9F7 314 aa8.85□□□□□ -0.99
RABGGTA-216ENST00000560243 OR13C8Q8NGS7 320 aa8.85□□□□□ -0.99
RABGGTA-216ENST00000560243 TERB2Q8NHR7 220 aa8.85□□□□□ -0.99
RABGGTA-216ENST00000560243 MARCH1Q8TCQ1 289 aa8.85□□□□□ -0.99
RABGGTA-216ENST00000560243 SRSF8Q9BRL6 282 aaKnown RBP8.85□□□□□ -0.99
RABGGTA-216ENST00000560243 FAM212BQ9NTI7 297 aaPredicted RBP8.85□□□□□ -0.99
RABGGTA-216ENST00000560243 TMEM14BQ9NUH8 114 aa8.85□□□□□ -0.99
RABGGTA-216ENST00000560243 SELENOKQ9Y6D0 94 aa8.85□□□□□ -0.99
RABGGTA-216ENST00000560243 SMAD5-AS1Q9Y6J3 95 aa8.85□□□□□ -0.99
RABGGTA-216ENST00000560243 HUWE1Q7Z6Z7 4374 aaKnown RBP8.85□□□□□ -0.99
RABGGTA-216ENST00000560243 C15orf61A6NNL5 157 aa8.84□□□□□ -0.99
RABGGTA-216ENST00000560243 CTDSPLO15194 276 aa8.84□□□□□ -0.99
RABGGTA-216ENST00000560243 GGCTO75223 188 aaKnown RBP8.84□□□□□ -0.99
RABGGTA-216ENST00000560243 IGKV1-5P01602 117 aa8.84□□□□□ -0.99
RABGGTA-216ENST00000560243 SERPINE2P07093 398 aa8.84□□□□□ -0.99
RABGGTA-216ENST00000560243 ARL3P36405 182 aa8.84□□□□□ -0.99
RABGGTA-216ENST00000560243 MECP2P51608 486 aaKnown RBP8.84□□□□□ -0.99
RABGGTA-216ENST00000560243 MRPS10P82664 201 aaKnown RBP8.84□□□□□ -0.99
RABGGTA-216ENST00000560243 TATDN3Q17R31 274 aa8.84□□□□□ -0.99
RABGGTA-216ENST00000560243 SP6Q3SY56 376 aa8.84□□□□□ -0.99
RABGGTA-216ENST00000560243 H2BFWTQ7Z2G1 175 aa8.84□□□□□ -0.99
RABGGTA-216ENST00000560243 Q8N1Y9 231 aa8.84□□□□□ -0.99
RABGGTA-216ENST00000560243 OR4C16Q8NGL9 310 aa8.84□□□□□ -0.99
RABGGTA-216ENST00000560243 MCFD2Q8NI22 146 aa8.84□□□□□ -0.99
RABGGTA-216ENST00000560243 EEF1AKMT3Q96AZ1 226 aa8.84□□□□□ -0.99
RABGGTA-216ENST00000560243 ZNF486Q96H40 463 aaPredicted RBP8.84□□□□□ -0.99
RABGGTA-216ENST00000560243 SOSTQ9BQB4 213 aa8.84□□□□□ -0.99
RABGGTA-216ENST00000560243 NXF2Q9GZY0 626 aaKnown RBP8.84□□□□□ -0.99
RABGGTA-216ENST00000560243 PRNDQ9UKY0 176 aa8.84□□□□□ -0.99
RABGGTA-216ENST00000560243 NBEAL2Q6ZNJ1 2754 aa8.83□□□□□ -1
RABGGTA-216ENST00000560243 IGHV3-21A0A0B4J1V1 117 aa8.83□□□□□ -1
RABGGTA-216ENST00000560243 H0Y980 276 aa8.83□□□□□ -1
RABGGTA-216ENST00000560243 CLEC3BP05452 202 aa8.83□□□□□ -1
RABGGTA-216ENST00000560243 GPR183P32249 361 aa8.83□□□□□ -1
RABGGTA-216ENST00000560243 SSBP1Q04837 148 aaKnown RBP8.83□□□□□ -1
RABGGTA-216ENST00000560243 SLC25A24Q6NUK1 477 aa8.83□□□□□ -1
RABGGTA-216ENST00000560243 ZNF502Q8TBZ5 544 aa8.83□□□□□ -1
RABGGTA-216ENST00000560243 CACNG8Q8WXS5 425 aa8.83□□□□□ -1
RABGGTA-216ENST00000560243 LSM10Q969L4 123 aaKnown RBP8.83□□□□□ -1
RABGGTA-216ENST00000560243 RTBDNQ9BSG5 229 aaPredicted RBP8.83□□□□□ -1
RABGGTA-216ENST00000560243 RBM38Q9H0Z9 239 aaKnown RBP8.83□□□□□ -1
RABGGTA-216ENST00000560243 SIGLEC8Q9NYZ4 499 aa8.83□□□□□ -1
RABGGTA-216ENST00000560243 F11RQ9Y624 299 aaKnown RBP8.83□□□□□ -1
RABGGTA-216ENST00000560243 TRBV7-1A0A0A6YYK4 115 aa8.82□□□□□ -1
RABGGTA-216ENST00000560243 IGHV3-35A0A0C4DH35 117 aa8.82□□□□□ -1
RABGGTA-216ENST00000560243 C3orf85A0A1B0GTC6 90 aa8.82□□□□□ -1
RABGGTA-216ENST00000560243 ANKRD20A5PA0PJZ0 165 aa8.82□□□□□ -1
RABGGTA-216ENST00000560243 CCDC160A6NGH7 325 aa8.82□□□□□ -1
RABGGTA-216ENST00000560243 C2orf70A6NJV1 201 aa8.82□□□□□ -1
RABGGTA-216ENST00000560243 GSTZ1O43708 216 aaPredicted RBP8.82□□□□□ -1
RABGGTA-216ENST00000560243 CTSDP07339 412 aaPredicted RBP8.82□□□□□ -1
RABGGTA-216ENST00000560243 FRMD6-AS1P0C7T7 363 aa8.82□□□□□ -1
RABGGTA-216ENST00000560243 P0C879 139 aa8.82□□□□□ -1
RABGGTA-216ENST00000560243 AKAIN1P0CW23 69 aa8.82□□□□□ -1
RABGGTA-216ENST00000560243 FOLR2P14207 255 aa8.82□□□□□ -1
RABGGTA-216ENST00000560243 MEF2DQ14814 521 aa8.82□□□□□ -1
RABGGTA-216ENST00000560243 SPINK9Q5DT21 86 aa8.82□□□□□ -1
RABGGTA-216ENST00000560243 THOC7Q6I9Y2 204 aaKnown RBP8.82□□□□□ -1
RABGGTA-216ENST00000560243 UNQ9165/PRO28630Q6UXU0 137 aa8.82□□□□□ -1
RABGGTA-216ENST00000560243 HSD17B13Q7Z5P4 300 aaPredicted RBP8.82□□□□□ -1
RABGGTA-216ENST00000560243 GPHB5Q86YW7 130 aa8.82□□□□□ -1
RABGGTA-216ENST00000560243 SBSPONQ8IVN8 264 aa8.82□□□□□ -1
RABGGTA-216ENST00000560243 OR5B3Q8NH48 314 aa8.82□□□□□ -1
RABGGTA-216ENST00000560243 OR4A16Q8NH70 328 aa8.82□□□□□ -1
RABGGTA-216ENST00000560243 ZFAND1Q8TCF1 268 aa8.82□□□□□ -1
RABGGTA-216ENST00000560243 CXorf58Q96LI9 332 aa8.82□□□□□ -1
RABGGTA-216ENST00000560243 TSC22D3Q99576 134 aa8.82□□□□□ -1
RABGGTA-216ENST00000560243 THAP7Q9BT49 309 aaPredicted RBP8.82□□□□□ -1
RABGGTA-216ENST00000560243 FKBP11Q9NYL4 201 aa8.82□□□□□ -1
RABGGTA-216ENST00000560243 COPZ2Q9P299 210 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms