RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 OR5B12Q96R08 314 aa8.84□□□□□ -0.99
SNX1-204ENST00000559061 SLC25A21Q9BQT8 299 aaPredicted RBP8.84□□□□□ -0.99
SNX1-204ENST00000559061 C7orf50Q9BRJ6 194 aaKnown RBP8.84□□□□□ -0.99
SNX1-204ENST00000559061 H3BUA1 57 aa8.83□□□□□ -1
SNX1-204ENST00000559061 B3GALNT1O75752 331 aa8.83□□□□□ -1
SNX1-204ENST00000559061 TRBV12-3P01733 135 aa8.83□□□□□ -1
SNX1-204ENST00000559061 IGHV3-11P01762 117 aa8.83□□□□□ -1
SNX1-204ENST00000559061 TRGV3P03979 118 aa8.83□□□□□ -1
SNX1-204ENST00000559061 ANXA7P20073 488 aaKnown RBP8.83□□□□□ -1
SNX1-204ENST00000559061 PSMB6P28072 239 aa8.83□□□□□ -1
SNX1-204ENST00000559061 SLC6A1P30531 599 aa8.83□□□□□ -1
SNX1-204ENST00000559061 TPPP2P59282 170 aa8.83□□□□□ -1
SNX1-204ENST00000559061 ZNF846Q147U1 533 aa8.83□□□□□ -1
SNX1-204ENST00000559061 TRIM16LQ309B1 348 aa8.83□□□□□ -1
SNX1-204ENST00000559061 NMSQ5H8A3 153 aa8.83□□□□□ -1
SNX1-204ENST00000559061 TMEM268Q5VZI3 342 aa8.83□□□□□ -1
SNX1-204ENST00000559061 H2BFWTQ7Z2G1 175 aa8.83□□□□□ -1
SNX1-204ENST00000559061 MRPL41Q8IXM3 137 aaKnown RBP8.83□□□□□ -1
SNX1-204ENST00000559061 SLC35G3Q8N808 338 aa8.83□□□□□ -1
SNX1-204ENST00000559061 RBPMSQ93062 196 aaKnown RBP8.83□□□□□ -1
SNX1-204ENST00000559061 GPR146Q96CH1 333 aa8.83□□□□□ -1
SNX1-204ENST00000559061 TMEM68Q96MH6 324 aa8.83□□□□□ -1
SNX1-204ENST00000559061 PHB2Q99623 299 aa8.83□□□□□ -1
SNX1-204ENST00000559061 SPIN2AQ99865 258 aa8.83□□□□□ -1
SNX1-204ENST00000559061 SPIN2BQ9BPZ2 258 aa8.83□□□□□ -1
SNX1-204ENST00000559061 AIFM2Q9BRQ8 373 aa8.83□□□□□ -1
SNX1-204ENST00000559061 WDR12Q9GZL7 423 aaKnown RBP8.83□□□□□ -1
SNX1-204ENST00000559061 OR51B2Q9Y5P1 312 aa8.83□□□□□ -1
SNX1-204ENST00000559061 IGLV11-55A0A075B6I3 123 aa8.82□□□□□ -1
SNX1-204ENST00000559061 IGHV4OR15-8A0A075B7B6 117 aa8.82□□□□□ -1
SNX1-204ENST00000559061 A0A087WW49 117 aa8.82□□□□□ -1
SNX1-204ENST00000559061 ST8SIA3O43173 380 aa8.82□□□□□ -1
SNX1-204ENST00000559061 ACTL6BO94805 426 aa8.82□□□□□ -1
SNX1-204ENST00000559061 SFT2D2O95562 160 aa8.82□□□□□ -1
SNX1-204ENST00000559061 LGALS1P09382 135 aaKnown RBP8.82□□□□□ -1
SNX1-204ENST00000559061 ASAH1Q13510 395 aa8.82□□□□□ -1
SNX1-204ENST00000559061 TMEM128Q5BJH2 165 aa8.82□□□□□ -1
SNX1-204ENST00000559061 SPINK9Q5DT21 86 aa8.82□□□□□ -1
SNX1-204ENST00000559061 LYZL2Q7Z4W2 148 aa8.82□□□□□ -1
SNX1-204ENST00000559061 ZNF429Q86V71 674 aa8.82□□□□□ -1
SNX1-204ENST00000559061 SGPP2Q8IWX5 399 aa8.82□□□□□ -1
SNX1-204ENST00000559061 WFDC9Q8NEX5 89 aa8.82□□□□□ -1
SNX1-204ENST00000559061 OR4F17Q8NGA8 305 aa8.82□□□□□ -1
SNX1-204ENST00000559061 OR1L8Q8NGR8 309 aa8.82□□□□□ -1
SNX1-204ENST00000559061 ZNF414Q96IQ9 312 aa8.82□□□□□ -1
SNX1-204ENST00000559061 OR4F4Q96R69 305 aa8.82□□□□□ -1
SNX1-204ENST00000559061 COA4Q9NYJ1 87 aa8.82□□□□□ -1
SNX1-204ENST00000559061 PRNDQ9UKY0 176 aa8.82□□□□□ -1
SNX1-204ENST00000559061 ZNF257Q9Y2Q1 563 aa8.82□□□□□ -1
SNX1-204ENST00000559061 NUDT19A8MXV4 375 aa8.81□□□□□ -1
SNX1-204ENST00000559061 CCL24O00175 119 aa8.81□□□□□ -1
SNX1-204ENST00000559061 NDUFB8O95169 186 aa8.81□□□□□ -1
SNX1-204ENST00000559061 TRAPPC2P0DI81 140 aa8.81□□□□□ -1
SNX1-204ENST00000559061 TRAPPC2BP0DI82 140 aa8.81□□□□□ -1
SNX1-204ENST00000559061 INPP1P49441 399 aa8.81□□□□□ -1
SNX1-204ENST00000559061 AKR1C2P52895 323 aa8.81□□□□□ -1
SNX1-204ENST00000559061 RHOGP84095 191 aa8.81□□□□□ -1
SNX1-204ENST00000559061 PRCDQ00LT1 54 aa8.81□□□□□ -1
SNX1-204ENST00000559061 TMEM65Q6PI78 240 aa8.81□□□□□ -1
SNX1-204ENST00000559061 CENPSQ8N2Z9 138 aa8.81□□□□□ -1
SNX1-204ENST00000559061 LRTM2Q8N967 370 aa8.81□□□□□ -1
SNX1-204ENST00000559061 OR5B3Q8NH48 314 aa8.81□□□□□ -1
SNX1-204ENST00000559061 IL22RA2Q969J5 263 aa8.81□□□□□ -1
SNX1-204ENST00000559061 CCDC140Q96MF4 163 aa8.81□□□□□ -1
SNX1-204ENST00000559061 SCGB3A2Q96PL1 93 aa8.81□□□□□ -1
SNX1-204ENST00000559061 SRSF8Q9BRL6 282 aaKnown RBP8.81□□□□□ -1
SNX1-204ENST00000559061 COMMD5Q9GZQ3 224 aa8.81□□□□□ -1
SNX1-204ENST00000559061 C20orf85Q9H1P6 137 aa8.81□□□□□ -1
SNX1-204ENST00000559061 SLA2Q9H6Q3 261 aa8.81□□□□□ -1
SNX1-204ENST00000559061 C9orf170A2RU37 121 aa8.8□□□□□ -1
SNX1-204ENST00000559061 MFSD2BA6NFX1 497 aa8.8□□□□□ -1
SNX1-204ENST00000559061 SNAPC5O75971 98 aa8.8□□□□□ -1
SNX1-204ENST00000559061 OR2J3O76001 311 aa8.8□□□□□ -1
SNX1-204ENST00000559061 TCRBP04435 133 aa8.8□□□□□ -1
SNX1-204ENST00000559061 MYCNOSP40205 109 aa8.8□□□□□ -1
SNX1-204ENST00000559061 MECP2P51608 486 aaKnown RBP8.8□□□□□ -1
SNX1-204ENST00000559061 DHRS2Q13268 280 aa8.8□□□□□ -1
SNX1-204ENST00000559061 PDLIM3Q53GG5 364 aaPredicted RBP8.8□□□□□ -1
SNX1-204ENST00000559061 SAMD5Q5TGI4 173 aa8.8□□□□□ -1
SNX1-204ENST00000559061 ZNF343Q6P1L6 599 aa8.8□□□□□ -1
SNX1-204ENST00000559061 OR2C3Q8N628 320 aa8.8□□□□□ -1
SNX1-204ENST00000559061 OR11H1Q8NG94 326 aa8.8□□□□□ -1
SNX1-204ENST00000559061 OR52B4Q8NGK2 314 aa8.8□□□□□ -1
SNX1-204ENST00000559061 LSM10Q969L4 123 aaKnown RBP8.8□□□□□ -1
SNX1-204ENST00000559061 TSC22D3Q99576 134 aa8.8□□□□□ -1
SNX1-204ENST00000559061 ZNF355PQ9NSJ1 428 aa8.8□□□□□ -1
SNX1-204ENST00000559061 CACNG5Q9UF02 275 aa8.8□□□□□ -1
SNX1-204ENST00000559061 S4R3C0 116 aa8.8□□□□□ -1
SNX1-204ENST00000559061 A0A0B4J2A0 478 aa8.79□□□□□ -1
SNX1-204ENST00000559061 MPTX1A8MV57 137 aa8.79□□□□□ -1
SNX1-204ENST00000559061 F8W735 103 aaPredicted RBP8.79□□□□□ -1
SNX1-204ENST00000559061 G3V4G9 280 aa8.79□□□□□ -1
SNX1-204ENST00000559061 PITX3O75364 302 aa8.79□□□□□ -1
SNX1-204ENST00000559061 OR4E1P0C645 316 aa8.79□□□□□ -1
SNX1-204ENST00000559061 OR13C7P0DN81 318 aa8.79□□□□□ -1
SNX1-204ENST00000559061 VAMP1P23763 118 aa8.79□□□□□ -1
SNX1-204ENST00000559061 SLURP1P55000 103 aa8.79□□□□□ -1
SNX1-204ENST00000559061 UBE2MP61081 183 aaKnown RBP8.79□□□□□ -1
SNX1-204ENST00000559061 HSPE1P61604 102 aaKnown RBP8.79□□□□□ -1
SNX1-204ENST00000559061 PVRIGQ6DKI7 326 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms