RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 FNDC10F2Z333 226 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 FAAHO00519 579 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 PIRO00625 290 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 GNRH2O43555 120 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 PDE6DO43924 150 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 CREBL2O60519 120 aaPredicted RBP1□□□□□ -2.25
VPS13C-207ENST00000558919 OR2B3O76000 313 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 OR7C1O76099 320 aaPredicted RBP1□□□□□ -2.25
VPS13C-207ENST00000558919 CST2P09228 141 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 UCHL1P09936 223 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 CD24P25063 80 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 S100A7P31151 101 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 PPP1R2P41236 205 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 XCL1P47992 114 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 IAH1Q2TAA2 248 aaPredicted RBP1□□□□□ -2.25
VPS13C-207ENST00000558919 PPP1R2P3Q6NXS1 205 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 Q6ZS49 121 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 STX12Q86Y82 276 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 SLC35F6Q8N357 371 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 GDPD1Q8N9F7 314 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 PXT1Q8NFP0 134 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 OR8B12Q8NGG6 310 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 OR51A2Q8NGJ7 313 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 OR10X1Q8NGY0 326 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 OR4X1Q8NH49 305 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 CLDND2Q8NHS1 167 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 MRPL30Q8TCC3 161 aaKnown RBP1□□□□□ -2.25
VPS13C-207ENST00000558919 ZNF675Q8TD23 568 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 SMCR5Q8TEV8 140 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 C9orf16Q9BUW7 83 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 TMEM147Q9BVK8 224 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 TTTY13Q9BZ97 58 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 EFCAB1Q9HAE3 211 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 XAGE1AQ9HD64 81 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 ENY2Q9NPA8 101 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 NDUFB11Q9NX14 153 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 IDI2-AS1Q9NZ38 188 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 OPTCQ9UBM4 332 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 FAM32AQ9Y421 112 aaKnown RBP1□□□□□ -2.25
VPS13C-207ENST00000558919 DOCK10Q96BY6 2186 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 WRNQ14191 1432 aaPredicted RBP eCLIP0.99□□□□□ -2.25
VPS13C-207ENST00000558919 NCOA1Q15788 1441 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 MTUS2Q5JR59 1369 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 LAMB2P55268 1798 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 TTC21AQ8NDW8 1320 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 TRGV5A0A0B4J1U4 118 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 TRAV26-2A0A0B4J265 109 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 A0A0J9YY10 115 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 FAM236DA0A1B0GTK5 79 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 MDFIC2A0A1B0GVS7 189 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 A0A1B0GX78 115 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 hADV38S2A0JD32 116 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 C11orf86A6NJI1 115 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 E5RI56 91 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 H3BRN7 92 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 KLRC4O43908 158 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 OR5F1O95221 314 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 PRM2P04554 102 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 FAM236CP0DP71 79 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 ALDH3A1P30838 453 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 CA5AP35218 305 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 DEFA1P59665 94 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 RPS20P60866 119 aaKnown RBP0.99□□□□□ -2.25
VPS13C-207ENST00000558919 VBP1P61758 197 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 HBA1P69905 142 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 MIAQ16674 131 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 TEX36Q5VZQ5 186 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 TMEM42Q69YG0 159 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 LHFPL1Q86WI0 220 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 OOSP2Q86WS3 158 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 ZNF283Q8N7M2 679 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 ZNF676Q8N7Q3 588 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 CT55Q8WUE5 264 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 AP3S1Q92572 193 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 MRPS24Q96EL2 167 aaKnown RBP0.99□□□□□ -2.25
VPS13C-207ENST00000558919 ERMAPQ96PL5 475 aaPredicted RBP0.99□□□□□ -2.25
VPS13C-207ENST00000558919 TSPAN32Q96QS1 320 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 NIPSNAP1Q9BPW8 284 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 CCDC90BQ9GZT6 254 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 RNASE7Q9H1E1 156 aaKnown RBP0.99□□□□□ -2.25
VPS13C-207ENST00000558919 CISHQ9NSE2 258 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 FBXL12Q9NXK8 326 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 FUT9Q9Y231 359 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 TMEM56-RWDD3S4R434 201 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 COL4A1P02462 1669 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 KDM5BQ9UGL1 1544 aa0.99□□□□□ -2.25
VPS13C-207ENST00000558919 CCDC144AA2RUR9 1427 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 KIAA2026Q5HYC2 2103 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 WDR90Q96KV7 1748 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 NUP155O75694 1391 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 ABCC12Q96J65 1359 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 TRAV9-1A0A075B6T8 112 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 A0A0J9YW62 118 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 EXOC1LA0A1B0GW35 172 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 GGT3PA6NGU5 568 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 C2orf74A8MZ97 194 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 LEPROTO15243 131 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 SERPINE1P05121 402 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 C8GP07360 202 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 BPGMP07738 259 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms