RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 HLA-DMBP28068 263 aa3.93□□□□□ -1.78
LRRC28-208ENST00000558771 RPL27AP46776 148 aaKnown RBP3.93□□□□□ -1.78
LRRC28-208ENST00000558771 SERPINB10P48595 397 aa3.93□□□□□ -1.78
LRRC28-208ENST00000558771 TMEM50BP56557 158 aa3.93□□□□□ -1.78
LRRC28-208ENST00000558771 QRFPP83859 136 aa3.93□□□□□ -1.78
LRRC28-208ENST00000558771 TMEM187Q14656 261 aa3.93□□□□□ -1.78
LRRC28-208ENST00000558771 RBMY1FQ15415 496 aaKnown RBP3.93□□□□□ -1.78
LRRC28-208ENST00000558771 IGSF11Q5DX21 431 aa3.93□□□□□ -1.78
LRRC28-208ENST00000558771 PLET1Q6UQ28 207 aa3.93□□□□□ -1.78
LRRC28-208ENST00000558771 ZNF66Q6ZN08 573 aa3.93□□□□□ -1.78
LRRC28-208ENST00000558771 VKORC1L1Q8N0U8 176 aa3.93□□□□□ -1.78
LRRC28-208ENST00000558771 Q8NAQ8 132 aa3.93□□□□□ -1.78
LRRC28-208ENST00000558771 OR6M1Q8NGM8 313 aa3.93□□□□□ -1.78
LRRC28-208ENST00000558771 OR4A4PQ8NGN8 299 aa3.93□□□□□ -1.78
LRRC28-208ENST00000558771 ZNF502Q8TBZ5 544 aa3.93□□□□□ -1.78
LRRC28-208ENST00000558771 TMEM190Q8WZ59 177 aa3.93□□□□□ -1.78
LRRC28-208ENST00000558771 DAZAP1Q96EP5 407 aaKnown RBP3.93□□□□□ -1.78
LRRC28-208ENST00000558771 ADTRPQ96IZ2 230 aa3.93□□□□□ -1.78
LRRC28-208ENST00000558771 CXorf58Q96LI9 332 aa3.93□□□□□ -1.78
LRRC28-208ENST00000558771 CMSS1Q9BQ75 279 aaKnown RBP3.93□□□□□ -1.78
LRRC28-208ENST00000558771 CABLES2Q9BTV7 478 aa3.93□□□□□ -1.78
LRRC28-208ENST00000558771 CHRDL1Q9BU40 450 aa3.93□□□□□ -1.78
LRRC28-208ENST00000558771 RNF126Q9BV68 326 aa3.93□□□□□ -1.78
LRRC28-208ENST00000558771 WDR12Q9GZL7 423 aaKnown RBP3.93□□□□□ -1.78
LRRC28-208ENST00000558771 HRH4Q9H3N8 390 aa3.93□□□□□ -1.78
LRRC28-208ENST00000558771 C12orf4Q9NQ89 552 aa3.93□□□□□ -1.78
LRRC28-208ENST00000558771 RBM7Q9Y580 266 aaKnown RBP3.93□□□□□ -1.78
LRRC28-208ENST00000558771 DMBT1Q9UGM3 2413 aaPredicted RBP3.92□□□□□ -1.78
LRRC28-208ENST00000558771 IGLV2-18A0A075B6J9 118 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 IGHV3OR16-8A0A075B7F1 116 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 TRBV6-7A0A0A0MS04 114 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 IGHV4-28A0A0C4DH34 117 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 FOXI3A8MTJ6 420 aaPredicted RBP3.92□□□□□ -1.78
LRRC28-208ENST00000558771 C16orf90A8MZG2 172 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 RAB27BO00194 218 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 FABP7O15540 132 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 TGOLN2O43493 480 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 WBP4O75554 376 aaKnown RBP3.92□□□□□ -1.78
LRRC28-208ENST00000558771 KBTBD11O94819 623 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 DHFRP00374 187 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 AMBPP02760 352 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 DEFA4P12838 97 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 MYL12AP19105 171 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 TFPI2P48307 235 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 PSMD7P51665 324 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 INSL4Q14641 139 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 C1orf100Q5SVJ3 147 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 C1orf146Q5VVC0 180 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 Q6ZR54 194 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 SSX9Q7RTT3 188 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 LRRTM1Q86UE6 522 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 PUSL1Q8N0Z8 303 aaKnown RBP3.92□□□□□ -1.78
LRRC28-208ENST00000558771 FAM89BQ8N5H3 189 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 ZNF485Q8NCK3 441 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 OR10J5Q8NHC4 309 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 ARHGAP5-AS1Q96IT6 56 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 OR2A7Q96R45 310 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 DCUN1D5Q9BTE7 237 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 SCRT1Q9BWW7 348 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 QTRT1Q9BXR0 403 aaKnown RBP3.92□□□□□ -1.78
LRRC28-208ENST00000558771 PECRQ9BY49 303 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 OR51E2Q9H255 320 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 DAZ1Q9NQZ3 744 aaKnown RBP3.92□□□□□ -1.78
LRRC28-208ENST00000558771 HSF4Q9ULV5 492 aa3.92□□□□□ -1.78
LRRC28-208ENST00000558771 DIMT1Q9UNQ2 313 aaKnown RBP3.92□□□□□ -1.78
LRRC28-208ENST00000558771 IGKV3-7A0A075B6H7 116 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 DEFB131BA0A096LNP1 70 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 LOC100130705A0A1B0GUX0 176 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 OR2T8A6NH00 312 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 C15orf61A6NNL5 157 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 J3QRK9 145 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 NDUFA4O00483 81 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 RGS10O43665 173 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 ZNF207O43670 478 aaKnown RBP3.91□□□□□ -1.78
LRRC28-208ENST00000558771 MRPS14O60783 128 aaKnown RBP3.91□□□□□ -1.78
LRRC28-208ENST00000558771 CELP19835 753 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 PTBP1P26599 531 aaKnown RBP eCLIP3.91□□□□□ -1.78
LRRC28-208ENST00000558771 MAPK3P27361 379 aaPredicted RBP3.91□□□□□ -1.78
LRRC28-208ENST00000558771 MAS1LP35410 378 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 CMC4P56277 68 aaPredicted RBP3.91□□□□□ -1.78
LRRC28-208ENST00000558771 TAS2R43P59537 309 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 RPL30P62888 115 aaKnown RBP3.91□□□□□ -1.78
LRRC28-208ENST00000558771 ARFRP1Q13795 201 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 IRF3Q14653 427 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 RNASE12Q5GAN4 147 aaKnown RBP3.91□□□□□ -1.78
LRRC28-208ENST00000558771 OR2B11Q5JQS5 317 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 RBM48Q5RL73 367 aaKnown RBP3.91□□□□□ -1.78
LRRC28-208ENST00000558771 TTC23Q5W5X9 447 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 ZNF767PQ75MW2 155 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 KCTD9Q7L273 389 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 CBR4Q8N4T8 237 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 VSTM2AQ8TAG5 236 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 TMEM167AQ8TBQ9 72 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 PYDC1Q8WXC3 89 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 MAFIPQ8WZ33 124 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 RNF2Q99496 336 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 GINS4Q9BRT9 223 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 URM1Q9BTM9 101 aaKnown RBP3.91□□□□□ -1.78
LRRC28-208ENST00000558771 NDUFAF3Q9BU61 184 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 C20orf24Q9BUV8 137 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms