RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 FBXL19-AS1Q494R0 122 aa8.84□□□□□ -0.99
CSPG4P5-201ENST00000558731 REC114Q7Z4M0 266 aa8.84□□□□□ -0.99
CSPG4P5-201ENST00000558731 ABHD5Q8WTS1 349 aa8.84□□□□□ -0.99
CSPG4P5-201ENST00000558731 FLYWCH2Q96CP2 140 aaKnown RBP8.84□□□□□ -0.99
CSPG4P5-201ENST00000558731 GNPNAT1Q96EK6 184 aaPredicted RBP8.84□□□□□ -0.99
CSPG4P5-201ENST00000558731 NIPSNAP3BQ9BS92 247 aa8.84□□□□□ -0.99
CSPG4P5-201ENST00000558731 VSIRQ9H7M9 311 aa8.84□□□□□ -0.99
CSPG4P5-201ENST00000558731 TCF19Q9Y242 345 aa8.84□□□□□ -0.99
CSPG4P5-201ENST00000558731 REG1AP05451 166 aa8.84□□□□□ -0.99
CSPG4P5-201ENST00000558731 PKIAP61925 76 aa8.84□□□□□ -0.99
CSPG4P5-201ENST00000558731 SSMEM1Q8WWF3 244 aa8.84□□□□□ -0.99
CSPG4P5-201ENST00000558731 PACRGQ96M98 296 aaPredicted RBP8.84□□□□□ -0.99
CSPG4P5-201ENST00000558731 H3BQ15 152 aa8.83□□□□□ -1
CSPG4P5-201ENST00000558731 J3QR06 171 aa8.83□□□□□ -1
CSPG4P5-201ENST00000558731 MEF2CQ06413 473 aaPredicted RBP8.83□□□□□ -1
CSPG4P5-201ENST00000558731 TFF3Q07654 80 aa8.83□□□□□ -1
CSPG4P5-201ENST00000558731 KHDC3LQ587J8 217 aa8.83□□□□□ -1
CSPG4P5-201ENST00000558731 CIB3Q96Q77 187 aaPredicted RBP8.83□□□□□ -1
CSPG4P5-201ENST00000558731 PLEKHA3Q9HB20 300 aa8.83□□□□□ -1
CSPG4P5-201ENST00000558731 OR51B2Q9Y5P1 312 aa8.83□□□□□ -1
CSPG4P5-201ENST00000558731 INSIG2Q9Y5U4 225 aa8.83□□□□□ -1
CSPG4P5-201ENST00000558731 IGHV3-21A0A0B4J1V1 117 aa8.83□□□□□ -1
CSPG4P5-201ENST00000558731 IGHV1-8P0DP01 117 aa8.83□□□□□ -1
CSPG4P5-201ENST00000558731 HIST1H1BP16401 226 aaKnown RBP8.83□□□□□ -1
CSPG4P5-201ENST00000558731 TAS2R60P59551 318 aa8.83□□□□□ -1
CSPG4P5-201ENST00000558731 SLC25A48Q6ZT89 311 aaKnown RBP8.83□□□□□ -1
CSPG4P5-201ENST00000558731 ZNF525Q8N782 197 aa8.83□□□□□ -1
CSPG4P5-201ENST00000558731 LHX4Q969G2 390 aa8.83□□□□□ -1
CSPG4P5-201ENST00000558731 MISP3Q96FF7 219 aa8.83□□□□□ -1
CSPG4P5-201ENST00000558731 NEIL1Q96FI4 390 aaPredicted RBP8.83□□□□□ -1
CSPG4P5-201ENST00000558731 HSPB7Q9UBY9 170 aa8.83□□□□□ -1
CSPG4P5-201ENST00000558731 FAM157AC9JC47 383 aa8.83□□□□□ -1
CSPG4P5-201ENST00000558731 RRHO14718 337 aa8.83□□□□□ -1
CSPG4P5-201ENST00000558731 SAA1P0DJI8 122 aaPredicted RBP8.83□□□□□ -1
CSPG4P5-201ENST00000558731 PDLIM3Q53GG5 364 aaPredicted RBP8.83□□□□□ -1
CSPG4P5-201ENST00000558731 WDR25Q64LD2 544 aaPredicted RBP8.83□□□□□ -1
CSPG4P5-201ENST00000558731 HAPLN4Q86UW8 402 aa8.83□□□□□ -1
CSPG4P5-201ENST00000558731 ZNF429Q86V71 674 aa8.83□□□□□ -1
CSPG4P5-201ENST00000558731 OR9G1Q8NH87 305 aa8.83□□□□□ -1
CSPG4P5-201ENST00000558731 GINS3Q9BRX5 216 aa8.83□□□□□ -1
CSPG4P5-201ENST00000558731 CGB3P0DN86 165 aa8.82□□□□□ -1
CSPG4P5-201ENST00000558731 CGB7P0DN87 165 aa8.82□□□□□ -1
CSPG4P5-201ENST00000558731 CCL20P78556 96 aa8.82□□□□□ -1
CSPG4P5-201ENST00000558731 DLK1P80370 383 aa8.82□□□□□ -1
CSPG4P5-201ENST00000558731 ODF3L1Q8IXM7 274 aa8.82□□□□□ -1
CSPG4P5-201ENST00000558731 ZNF295-AS1Q8N0V1 137 aa8.82□□□□□ -1
CSPG4P5-201ENST00000558731 OR10W1Q8NGF6 305 aa8.82□□□□□ -1
CSPG4P5-201ENST00000558731 ADTRPQ96IZ2 230 aa8.82□□□□□ -1
CSPG4P5-201ENST00000558731 IGHV3OR16-10A0A075B7F0 116 aa8.82□□□□□ -1
CSPG4P5-201ENST00000558731 SRRM4A7MD48 611 aaKnown RBP8.82□□□□□ -1
CSPG4P5-201ENST00000558731 SNRPCP09234 159 aaKnown RBP8.82□□□□□ -1
CSPG4P5-201ENST00000558731 DANCRP0C864 163 aa8.82□□□□□ -1
CSPG4P5-201ENST00000558731 IL3RAP26951 378 aa8.82□□□□□ -1
CSPG4P5-201ENST00000558731 CRYBG3Q68DQ2 2970 aa8.82□□□□□ -1
CSPG4P5-201ENST00000558731 SLC39A9Q9NUM3 307 aa8.82□□□□□ -1
CSPG4P5-201ENST00000558731 KIR2DS2P43631 304 aa8.82□□□□□ -1
CSPG4P5-201ENST00000558731 TAS2R30P59541 319 aa8.82□□□□□ -1
CSPG4P5-201ENST00000558731 RAB11AP62491 216 aa8.82□□□□□ -1
CSPG4P5-201ENST00000558731 BATFQ16520 125 aa8.82□□□□□ -1
CSPG4P5-201ENST00000558731 FFAR4Q5NUL3 377 aa8.82□□□□□ -1
CSPG4P5-201ENST00000558731 TMEM133Q9H2Q1 129 aa8.82□□□□□ -1
CSPG4P5-201ENST00000558731 TUBA4BQ9H853 241 aa8.82□□□□□ -1
CSPG4P5-201ENST00000558731 PATZ1Q9HBE1 687 aaKnown RBP8.82□□□□□ -1
CSPG4P5-201ENST00000558731 RPRMQ9NS64 109 aa8.82□□□□□ -1
CSPG4P5-201ENST00000558731 UTP20O75691 2785 aaKnown RBP8.82□□□□□ -1
CSPG4P5-201ENST00000558731 HRNRQ86YZ3 2850 aaPredicted RBP8.82□□□□□ -1
CSPG4P5-201ENST00000558731 SLC25A6P12236 298 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 MMP9P14780 707 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 COMMD1Q8N668 190 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 NRGNQ92686 78 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 ACY3Q96HD9 319 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 GAB2Q9UQC2 676 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 TANC2Q9HCD6 1990 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 C22orf46C9J442 243 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 LGALS4P56470 323 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 SPCS3P61009 180 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 TLE4Q04727 773 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 TNXAQ16473 311 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 TMEM155Q4W5P6 130 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 ZNF787Q6DD87 383 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 NECAP1Q8NC96 275 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 Q8WTZ3 238 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 TAF15Q92804 592 aaKnown RBP eCLIP8.81□□□□□ -1
CSPG4P5-201ENST00000558731 FAM210BQ96KR6 192 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 SSBP3Q9BWW4 388 aaPredicted RBP8.81□□□□□ -1
CSPG4P5-201ENST00000558731 LOC105371242A0A075B767 164 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 IGHV2-26A0A0B4J1V2 119 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 HIST1H2BKO60814 126 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 MBP02144 154 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 HIST1H2BJP06899 126 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 CXCL1P09341 107 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 HIST1H2BOP23527 126 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 NPY1RP25929 384 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 HIST1H2BBP33778 126 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 PRRX1P54821 245 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 HIST1H2BDP58876 126 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 HIST1H2BCP62807 126 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 RELBQ01201 579 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 HIST2H2BEQ16778 126 aa8.81□□□□□ -1
CSPG4P5-201ENST00000558731 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms