RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 SPIN2AQ99865 258 aa12.04□□□□□ -0.48
LINC01220-201ENST00000558575 SPIN2BQ9BPZ2 258 aa12.04□□□□□ -0.48
LINC01220-201ENST00000558575 KCNIP3Q9Y2W7 256 aa12.04□□□□□ -0.48
LINC01220-201ENST00000558575 AREGP15514 252 aa12.03□□□□□ -0.48
LINC01220-201ENST00000558575 SLC6A1P30531 599 aa12.03□□□□□ -0.48
LINC01220-201ENST00000558575 CDX1P47902 265 aaPredicted RBP12.03□□□□□ -0.48
LINC01220-201ENST00000558575 PPP1R1AQ13522 171 aa12.03□□□□□ -0.48
LINC01220-201ENST00000558575 OR10W1Q8NGF6 305 aa12.03□□□□□ -0.48
LINC01220-201ENST00000558575 PHB2Q99623 299 aa12.03□□□□□ -0.48
LINC01220-201ENST00000558575 NDUFA4L2Q9NRX3 87 aa12.03□□□□□ -0.48
LINC01220-201ENST00000558575 TMEM14BQ9NUH8 114 aa12.03□□□□□ -0.48
LINC01220-201ENST00000558575 IGLC7A0M8Q6 106 aa12.02□□□□□ -0.49
LINC01220-201ENST00000558575 C15orf61A6NNL5 157 aa12.02□□□□□ -0.49
LINC01220-201ENST00000558575 SNAPC5O75971 98 aa12.02□□□□□ -0.49
LINC01220-201ENST00000558575 BRI3O95415 125 aa12.02□□□□□ -0.49
LINC01220-201ENST00000558575 PRH1P02810 166 aa12.02□□□□□ -0.49
LINC01220-201ENST00000558575 ASAH1Q13510 395 aa12.02□□□□□ -0.49
LINC01220-201ENST00000558575 ANKRD55Q3KP44 614 aa12.02□□□□□ -0.49
LINC01220-201ENST00000558575 KHDC1LQ5JSQ8 128 aa12.02□□□□□ -0.49
LINC01220-201ENST00000558575 TMEM268Q5VZI3 342 aa12.02□□□□□ -0.49
LINC01220-201ENST00000558575 CENPSQ8N2Z9 138 aa12.02□□□□□ -0.49
LINC01220-201ENST00000558575 RBPMSQ93062 196 aaKnown RBP12.02□□□□□ -0.49
LINC01220-201ENST00000558575 GPR146Q96CH1 333 aa12.02□□□□□ -0.49
LINC01220-201ENST00000558575 COMMD5Q9GZQ3 224 aa12.02□□□□□ -0.49
LINC01220-201ENST00000558575 GNB4Q9HAV0 340 aa12.02□□□□□ -0.49
LINC01220-201ENST00000558575 PRNDQ9UKY0 176 aa12.02□□□□□ -0.49
LINC01220-201ENST00000558575 OR51B2Q9Y5P1 312 aa12.02□□□□□ -0.49
LINC01220-201ENST00000558575 SFT2D2O95562 160 aa12.01□□□□□ -0.49
LINC01220-201ENST00000558575 TCRBP04435 133 aa12.01□□□□□ -0.49
LINC01220-201ENST00000558575 CRYGCP07315 174 aa12.01□□□□□ -0.49
LINC01220-201ENST00000558575 TRAPPC2P0DI81 140 aa12.01□□□□□ -0.49
LINC01220-201ENST00000558575 TRAPPC2BP0DI82 140 aa12.01□□□□□ -0.49
LINC01220-201ENST00000558575 ANXA7P20073 488 aaKnown RBP12.01□□□□□ -0.49
LINC01220-201ENST00000558575 TMEM65Q6PI78 240 aa12.01□□□□□ -0.49
LINC01220-201ENST00000558575 C8orf86Q6ZUL3 223 aa12.01□□□□□ -0.49
LINC01220-201ENST00000558575 LYZL2Q7Z4W2 148 aa12.01□□□□□ -0.49
LINC01220-201ENST00000558575 ZNF695Q8IW36 515 aa12.01□□□□□ -0.49
LINC01220-201ENST00000558575 OR1L8Q8NGR8 309 aa12.01□□□□□ -0.49
LINC01220-201ENST00000558575 UBE2E2Q96LR5 201 aa12.01□□□□□ -0.49
LINC01220-201ENST00000558575 TSC22D3Q99576 134 aa12.01□□□□□ -0.49
LINC01220-201ENST00000558575 QTRT1Q9BXR0 403 aaKnown RBP12.01□□□□□ -0.49
LINC01220-201ENST00000558575 NPIPB5A8MRT5 1133 aa12□□□□□ -0.49
LINC01220-201ENST00000558575 H3BUA1 57 aa12□□□□□ -0.49
LINC01220-201ENST00000558575 CTRB1P17538 263 aa12□□□□□ -0.49
LINC01220-201ENST00000558575 PSMB6P28072 239 aa12□□□□□ -0.49
LINC01220-201ENST00000558575 AKR1C2P52895 323 aa12□□□□□ -0.49
LINC01220-201ENST00000558575 HSPE1P61604 102 aaKnown RBP12□□□□□ -0.49
LINC01220-201ENST00000558575 DEFA5Q01523 94 aa12□□□□□ -0.49
LINC01220-201ENST00000558575 WT1-ASQ06250 92 aa12□□□□□ -0.49
LINC01220-201ENST00000558575 KLK9Q2XQG4 91 aa12□□□□□ -0.49
LINC01220-201ENST00000558575 CTRB2Q6GPI1 263 aa12□□□□□ -0.49
LINC01220-201ENST00000558575 ETV3LQ6ZN32 361 aa12□□□□□ -0.49
LINC01220-201ENST00000558575 SLC35G3Q8N808 338 aa12□□□□□ -0.49
LINC01220-201ENST00000558575 KLHL30-AS1Q8NEE0 82 aa12□□□□□ -0.49
LINC01220-201ENST00000558575 OR4A16Q8NH70 328 aa12□□□□□ -0.49
LINC01220-201ENST00000558575 IL22RA2Q969J5 263 aa12□□□□□ -0.49
LINC01220-201ENST00000558575 LSM10Q969L4 123 aaKnown RBP12□□□□□ -0.49
LINC01220-201ENST00000558575 FANCD2OSQ96PS1 177 aa12□□□□□ -0.49
LINC01220-201ENST00000558575 ZNF355PQ9NSJ1 428 aa12□□□□□ -0.49
LINC01220-201ENST00000558575 COA4Q9NYJ1 87 aa12□□□□□ -0.49
LINC01220-201ENST00000558575 FKBP11Q9NYL4 201 aa12□□□□□ -0.49
LINC01220-201ENST00000558575 KLK9Q9UKQ9 250 aa12□□□□□ -0.49
LINC01220-201ENST00000558575 DMRT1Q9Y5R6 373 aa12□□□□□ -0.49
LINC01220-201ENST00000558575 SACSQ9NZJ4 4579 aa11.99□□□□□ -0.49
LINC01220-201ENST00000558575 TRBV9A0A0B4J1U6 114 aa11.99□□□□□ -0.49
LINC01220-201ENST00000558575 C9orf170A2RU37 121 aa11.99□□□□□ -0.49
LINC01220-201ENST00000558575 I3L521 148 aa11.99□□□□□ -0.49
LINC01220-201ENST00000558575 ATG12O94817 140 aa11.99□□□□□ -0.49
LINC01220-201ENST00000558575 TRGV3P03979 118 aa11.99□□□□□ -0.49
LINC01220-201ENST00000558575 REG1AP05451 166 aa11.99□□□□□ -0.49
LINC01220-201ENST00000558575 VAMP1P23763 118 aa11.99□□□□□ -0.49
LINC01220-201ENST00000558575 TPPP2P59282 170 aa11.99□□□□□ -0.49
LINC01220-201ENST00000558575 UBE2MP61081 183 aaKnown RBP11.99□□□□□ -0.49
LINC01220-201ENST00000558575 AARDQ4LEZ3 155 aa11.99□□□□□ -0.49
LINC01220-201ENST00000558575 NMSQ5H8A3 153 aa11.99□□□□□ -0.49
LINC01220-201ENST00000558575 ZNF429Q86V71 674 aa11.99□□□□□ -0.49
LINC01220-201ENST00000558575 LGI3Q8N145 548 aa11.99□□□□□ -0.49
LINC01220-201ENST00000558575 LRTM2Q8N967 370 aa11.99□□□□□ -0.49
LINC01220-201ENST00000558575 OR5B3Q8NH48 314 aa11.99□□□□□ -0.49
LINC01220-201ENST00000558575 RRNAD1Q96FB5 475 aaKnown RBP11.99□□□□□ -0.49
LINC01220-201ENST00000558575 RAX2Q96IS3 184 aa11.99□□□□□ -0.49
LINC01220-201ENST00000558575 DUX3Q96PT4 197 aa11.99□□□□□ -0.49
LINC01220-201ENST00000558575 OR5B12Q96R08 314 aa11.99□□□□□ -0.49
LINC01220-201ENST00000558575 SRSF8Q9BRL6 282 aaKnown RBP11.99□□□□□ -0.49
LINC01220-201ENST00000558575 HINT2Q9BX68 163 aa11.99□□□□□ -0.49
LINC01220-201ENST00000558575 SLA2Q9H6Q3 261 aa11.99□□□□□ -0.49
LINC01220-201ENST00000558575 ZNF257Q9Y2Q1 563 aa11.99□□□□□ -0.49
LINC01220-201ENST00000558575 A0A0B4J2A0 478 aa11.98□□□□□ -0.49
LINC01220-201ENST00000558575 ST8SIA3O43173 380 aa11.98□□□□□ -0.49
LINC01220-201ENST00000558575 IGHV3-11P01762 117 aa11.98□□□□□ -0.49
LINC01220-201ENST00000558575 OR4E1P0C645 316 aa11.98□□□□□ -0.49
LINC01220-201ENST00000558575 OR13C7P0DN81 318 aa11.98□□□□□ -0.49
LINC01220-201ENST00000558575 ANXA3P12429 323 aa11.98□□□□□ -0.49
LINC01220-201ENST00000558575 DEFB136Q30KP8 78 aa11.98□□□□□ -0.49
LINC01220-201ENST00000558575 FAM219AQ8IW50 185 aa11.98□□□□□ -0.49
LINC01220-201ENST00000558575 OR4F17Q8NGA8 305 aa11.98□□□□□ -0.49
LINC01220-201ENST00000558575 C4orf3Q8WVX3 66 aa11.98□□□□□ -0.49
LINC01220-201ENST00000558575 OR4F4Q96R69 305 aa11.98□□□□□ -0.49
LINC01220-201ENST00000558575 P2RX4Q99571 388 aa11.98□□□□□ -0.49
LINC01220-201ENST00000558575 ALX4Q9H161 411 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms