RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 P2RX4Q99571 388 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 DCSTAMPQ9H295 470 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 SLC35D1Q9NTN3 355 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 TAS2R8Q9NYW2 309 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 PIPOXQ9P0Z9 390 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 METTL1Q9UBP6 276 aaKnown RBP3.25□□□□□ -1.89
SPG11-211ENST00000558561 KLK11Q9UBX7 282 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 ANXA10Q9UJ72 324 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 ZNF221Q9UK13 617 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 RBMX2Q9Y388 322 aaKnown RBP3.25□□□□□ -1.89
SPG11-211ENST00000558561 TSSC4Q9Y5U2 329 aaPredicted RBP3.25□□□□□ -1.89
SPG11-211ENST00000558561 A0A087WW49 117 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 TRAV41A0A0B4J266 112 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 A0A1W2PN81 502 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 OR5H14A6NHG9 310 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 MSGN1A6NI15 193 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 I3L521 148 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 CCL24O00175 119 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 SULT1C2O00338 296 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 CRYZL1O95825 349 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 IGHG4P01861 327 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 IGF1P05019 195 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 DTYMKP23919 212 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 PSMB8P28062 276 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 CHRNA7P36544 502 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 LUMP51884 338 aaPredicted RBP3.24□□□□□ -1.89
SPG11-211ENST00000558561 MFAP4P55083 255 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 RAB25P57735 213 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 ZNF45Q02386 682 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 FXYD3Q14802 87 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 TEX38Q6PEX7 206 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 UNQ5815/PRO19632Q6UWF5 114 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 DHRS11Q6UWP2 260 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 ZNF818PQ6ZRF7 136 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 SSX9Q7RTT3 188 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 PPP1R27Q86WC6 154 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 CLVS1Q8IUQ0 354 aaPredicted RBP3.24□□□□□ -1.89
SPG11-211ENST00000558561 ZNF695Q8IW36 515 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 KLHL30-AS1Q8NEE0 82 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 OR11H1Q8NG94 326 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 OR52I2Q8NH67 350 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 GRPEL2Q8TAA5 225 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 GPX8Q8TED1 209 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 CHPT1Q8WUD6 406 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 DCUN1D4Q92564 292 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 DLX4Q92988 240 aaPredicted RBP3.24□□□□□ -1.89
SPG11-211ENST00000558561 MRGPRFQ96AM1 343 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 FLYWCH2Q96CP2 140 aaKnown RBP3.24□□□□□ -1.89
SPG11-211ENST00000558561 SAT2Q96F10 170 aaPredicted RBP3.24□□□□□ -1.89
SPG11-211ENST00000558561 S100A16Q96FQ6 103 aaKnown RBP3.24□□□□□ -1.89
SPG11-211ENST00000558561 GINS4Q9BRT9 223 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 NSG2Q9Y328 171 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 WASHC3Q9Y3C0 194 aa3.24□□□□□ -1.89
SPG11-211ENST00000558561 RBM7Q9Y580 266 aaKnown RBP3.24□□□□□ -1.89
SPG11-211ENST00000558561 A0A1W2PS18 150 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 PRSS47A8MTI9 375 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 FAM25AB3EWG3 89 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 FAM25CB3EWG5 89 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 FAM25GB3EWG6 89 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 M0QZK8 103 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 PGLYRP1O75594 196 aaPredicted RBP3.23□□□□□ -1.89
SPG11-211ENST00000558561 GABARAPO95166 117 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 PPYP01298 95 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 IGKV1-39P01597 117 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 IGHV3-23P01764 117 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 HLA-AP01891 365 aaKnown RBP3.23□□□□□ -1.89
SPG11-211ENST00000558561 HLA-DRB1P01911 266 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 IGKV1D-39P04432 117 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 REG1AP05451 166 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 ZNF735P0CB33 412 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 SAA1P0DJI8 122 aaPredicted RBP3.23□□□□□ -1.89
SPG11-211ENST00000558561 OR5H8P0DN80 308 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 MC5RP33032 325 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 PRSS3P35030 304 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 MYCNOSP40205 109 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 CDX1P47902 265 aaPredicted RBP3.23□□□□□ -1.89
SPG11-211ENST00000558561 RORCP51449 518 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 UBE2V1Q13404 147 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 KIR2DS1Q14954 304 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 PLGLAQ15195 96 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 PRSS8Q16651 343 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 TMEM30BQ3MIR4 351 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 UBE2NLQ5JXB2 153 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 KPRPQ5T749 579 aaPredicted RBP3.23□□□□□ -1.89
SPG11-211ENST00000558561 AADACL3Q5VUY0 350 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 FAAP20Q6NZ36 180 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 ZNF562Q6V9R5 426 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 ADAMTSL5Q6ZMM2 481 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 MOB1BQ7L9L4 216 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 SMIM29Q86T20 159 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 LAX1Q8IWV1 398 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 OR5AP2Q8NGF4 316 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 OR10W1Q8NGF6 305 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 OR4X2Q8NGF9 303 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 OR1N2Q8NGR9 330 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 DYNC2LI1Q8TCX1 351 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 MYOZ3Q8TDC0 251 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 GIMAP1Q8WWP7 306 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 AKR1E2Q96JD6 320 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 ZNF2Q9BSG1 426 aaPredicted RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms