RNA–Protein interactions for RNA: ENST00000558534.5

RABGGTA-205, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-205ENST00000558534 RHOGP84095 191 aa12.23□□□□□ -0.45
RABGGTA-205ENST00000558534 ZNF45Q02386 682 aa12.23□□□□□ -0.45
RABGGTA-205ENST00000558534 OXLD1Q5BKU9 147 aa12.23□□□□□ -0.45
RABGGTA-205ENST00000558534 C10orf55Q5SWW7 151 aa12.23□□□□□ -0.45
RABGGTA-205ENST00000558534 CASTOR1Q8WTX7 329 aa12.23□□□□□ -0.45
RABGGTA-205ENST00000558534 SEC22AQ96IW7 307 aa12.23□□□□□ -0.45
RABGGTA-205ENST00000558534 CXorf58Q96LI9 332 aa12.23□□□□□ -0.45
RABGGTA-205ENST00000558534 SLC25A21Q9BQT8 299 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-205ENST00000558534 ELOVL1Q9BW60 279 aa12.23□□□□□ -0.45
RABGGTA-205ENST00000558534 PEF1Q9UBV8 284 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-205ENST00000558534 GPR132Q9UNW8 380 aa12.23□□□□□ -0.45
RABGGTA-205ENST00000558534 OR51B2Q9Y5P1 312 aa12.23□□□□□ -0.45
RABGGTA-205ENST00000558534 OVOL1O14753 267 aa12.22□□□□□ -0.45
RABGGTA-205ENST00000558534 CTRB1P17538 263 aa12.22□□□□□ -0.45
RABGGTA-205ENST00000558534 PI3P19957 117 aa12.22□□□□□ -0.45
RABGGTA-205ENST00000558534 UCP1P25874 307 aa12.22□□□□□ -0.45
RABGGTA-205ENST00000558534 MECP2P51608 486 aaKnown RBP12.22□□□□□ -0.45
RABGGTA-205ENST00000558534 SRPXP78539 464 aa12.22□□□□□ -0.45
RABGGTA-205ENST00000558534 ZNF57Q68EA5 555 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-205ENST00000558534 CTRB2Q6GPI1 263 aa12.22□□□□□ -0.45
RABGGTA-205ENST00000558534 FAAP20Q6NZ36 180 aa12.22□□□□□ -0.45
RABGGTA-205ENST00000558534 ZNF343Q6P1L6 599 aa12.22□□□□□ -0.45
RABGGTA-205ENST00000558534 ZNF429Q86V71 674 aa12.22□□□□□ -0.45
RABGGTA-205ENST00000558534 TRIM63Q969Q1 353 aa12.22□□□□□ -0.45
RABGGTA-205ENST00000558534 DUX3Q96PT4 197 aa12.22□□□□□ -0.45
RABGGTA-205ENST00000558534 NAA60Q9H7X0 242 aa12.22□□□□□ -0.45
RABGGTA-205ENST00000558534 TMEM14BQ9NUH8 114 aa12.22□□□□□ -0.45
RABGGTA-205ENST00000558534 MEGF8Q7Z7M0 2845 aa12.22□□□□□ -0.45
RABGGTA-205ENST00000558534 TEX50A0A1B0GTY4 177 aa12.21□□□□□ -0.45
RABGGTA-205ENST00000558534 HMX3A6NHT5 357 aa12.21□□□□□ -0.45
RABGGTA-205ENST00000558534 SEC14L6B5MCN3 397 aa12.21□□□□□ -0.45
RABGGTA-205ENST00000558534 WIPF1O43516 503 aa12.21□□□□□ -0.45
RABGGTA-205ENST00000558534 EXOSC2Q13868 293 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-205ENST00000558534 KLF9Q13886 244 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-205ENST00000558534 ZNF79Q15937 498 aa12.21□□□□□ -0.45
RABGGTA-205ENST00000558534 KLK9Q2XQG4 91 aa12.21□□□□□ -0.45
RABGGTA-205ENST00000558534 C1QL4Q86Z23 238 aa12.21□□□□□ -0.45
RABGGTA-205ENST00000558534 MRGPRFQ96AM1 343 aa12.21□□□□□ -0.45
RABGGTA-205ENST00000558534 EEF1AKMT3Q96AZ1 226 aa12.21□□□□□ -0.45
RABGGTA-205ENST00000558534 C7orf50Q9BRJ6 194 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-205ENST00000558534 TMEM222Q9H0R3 208 aa12.21□□□□□ -0.45
RABGGTA-205ENST00000558534 AKIP1Q9NQ31 210 aa12.21□□□□□ -0.45
RABGGTA-205ENST00000558534 KLK9Q9UKQ9 250 aa12.21□□□□□ -0.45
RABGGTA-205ENST00000558534 IGHV4OR15-8A0A075B7B6 117 aa12.2□□□□□ -0.46
RABGGTA-205ENST00000558534 A0A087WW49 117 aa12.2□□□□□ -0.46
RABGGTA-205ENST00000558534 CRYM-AS1A6NIL9 109 aa12.2□□□□□ -0.46
RABGGTA-205ENST00000558534 C15orf32Q32M92 178 aa12.2□□□□□ -0.46
RABGGTA-205ENST00000558534 CNPY1Q3B7I2 92 aa12.2□□□□□ -0.46
RABGGTA-205ENST00000558534 FOXB2Q5VYV0 432 aa12.2□□□□□ -0.46
RABGGTA-205ENST00000558534 RBPMSQ93062 196 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-205ENST00000558534 IL22RA2Q969J5 263 aa12.2□□□□□ -0.46
RABGGTA-205ENST00000558534 GALNT14Q96FL9 552 aa12.2□□□□□ -0.46
RABGGTA-205ENST00000558534 TP53RKQ96S44 253 aa12.2□□□□□ -0.46
RABGGTA-205ENST00000558534 HINT2Q9BX68 163 aa12.2□□□□□ -0.46
RABGGTA-205ENST00000558534 SRRQ9GZT4 340 aa12.2□□□□□ -0.46
RABGGTA-205ENST00000558534 C5orf66Q9H5L9 145 aa12.2□□□□□ -0.46
RABGGTA-205ENST00000558534 NDUFA4L2Q9NRX3 87 aa12.2□□□□□ -0.46
RABGGTA-205ENST00000558534 TRBV7-1A0A0A6YYK4 115 aa12.19□□□□□ -0.46
RABGGTA-205ENST00000558534 TRAV3A0A0B4J244 114 aa12.19□□□□□ -0.46
RABGGTA-205ENST00000558534 IGLC7A0M8Q6 106 aa12.19□□□□□ -0.46
RABGGTA-205ENST00000558534 OR2J3O76001 311 aa12.19□□□□□ -0.46
RABGGTA-205ENST00000558534 CDS2O95674 445 aa12.19□□□□□ -0.46
RABGGTA-205ENST00000558534 OR13C7P0DN81 318 aa12.19□□□□□ -0.46
RABGGTA-205ENST00000558534 HSPE1P61604 102 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-205ENST00000558534 ERHP84090 104 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-205ENST00000558534 EGFEM1PQ0D2K5 195 aa12.19□□□□□ -0.46
RABGGTA-205ENST00000558534 RPEL1Q2QD12 228 aa12.19□□□□□ -0.46
RABGGTA-205ENST00000558534 OR4C12Q96R67 309 aa12.19□□□□□ -0.46
RABGGTA-205ENST00000558534 ATP6V0BQ99437 205 aa12.19□□□□□ -0.46
RABGGTA-205ENST00000558534 RTBDNQ9BSG5 229 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-205ENST00000558534 ALX4Q9H161 411 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-205ENST00000558534 PLEKHA3Q9HB20 300 aa12.19□□□□□ -0.46
RABGGTA-205ENST00000558534 BATF3Q9NR55 127 aa12.19□□□□□ -0.46
RABGGTA-205ENST00000558534 FBXL7Q9UJT9 491 aa12.19□□□□□ -0.46
RABGGTA-205ENST00000558534 OR5AC1P0C628 307 aa12.18□□□□□ -0.46
RABGGTA-205ENST00000558534 AREGP15514 252 aa12.18□□□□□ -0.46
RABGGTA-205ENST00000558534 HOXD3P31249 432 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-205ENST00000558534 PRCDQ00LT1 54 aa12.18□□□□□ -0.46
RABGGTA-205ENST00000558534 RBMS2Q15434 407 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-205ENST00000558534 SLC35G3Q8N808 338 aa12.18□□□□□ -0.46
RABGGTA-205ENST00000558534 S100ZQ8WXG8 99 aa12.18□□□□□ -0.46
RABGGTA-205ENST00000558534 DCUN1D4Q92564 292 aa12.18□□□□□ -0.46
RABGGTA-205ENST00000558534 ENY2Q9NPA8 101 aa12.18□□□□□ -0.46
RABGGTA-205ENST00000558534 GAR1Q9NY12 217 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-205ENST00000558534 PEMTQ9UBM1 199 aa12.18□□□□□ -0.46
RABGGTA-205ENST00000558534 IGLV11-55A0A075B6I3 123 aa12.17□□□□□ -0.46
RABGGTA-205ENST00000558534 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-205ENST00000558534 ANKRD34BA5PLL1 514 aa12.17□□□□□ -0.46
RABGGTA-205ENST00000558534 E7EUB6 86 aa12.17□□□□□ -0.46
RABGGTA-205ENST00000558534 IGKV1-39P01597 117 aa12.17□□□□□ -0.46
RABGGTA-205ENST00000558534 IGKV1D-39P04432 117 aa12.17□□□□□ -0.46
RABGGTA-205ENST00000558534 SUB1P53999 127 aaKnown RBP eCLIP12.17□□□□□ -0.46
RABGGTA-205ENST00000558534 SLURP1P55000 103 aa12.17□□□□□ -0.46
RABGGTA-205ENST00000558534 UBE2MP61081 183 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-205ENST00000558534 PDLIM3Q53GG5 364 aaPredicted RBP12.17□□□□□ -0.46
RABGGTA-205ENST00000558534 TMEM128Q5BJH2 165 aa12.17□□□□□ -0.46
RABGGTA-205ENST00000558534 VN1R17PQ8TDU5 208 aa12.17□□□□□ -0.46
RABGGTA-205ENST00000558534 NSG2Q9Y328 171 aa12.17□□□□□ -0.46
RABGGTA-205ENST00000558534 F11RQ9Y624 299 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-205ENST00000558534 DUXBA0A1W2PPF3 345 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms