RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 MARC2Q969Z3 335 aa11□□□□□ -0.65
SHMT2-235ENST00000557740 MOB3AQ96BX8 217 aa11□□□□□ -0.65
SHMT2-235ENST00000557740 ZNF2Q9BSG1 426 aaPredicted RBP11□□□□□ -0.65
SHMT2-235ENST00000557740 UFC1Q9Y3C8 167 aa11□□□□□ -0.65
SHMT2-235ENST00000557740 RYR2Q92736 4967 aa11□□□□□ -0.65
SHMT2-235ENST00000557740 PMP2P02689 132 aa10.99□□□□□ -0.65
SHMT2-235ENST00000557740 TRAPPC2P0DI81 140 aa10.99□□□□□ -0.65
SHMT2-235ENST00000557740 TRAPPC2BP0DI82 140 aa10.99□□□□□ -0.65
SHMT2-235ENST00000557740 OR13C7P0DN81 318 aa10.99□□□□□ -0.65
SHMT2-235ENST00000557740 PTBP1P26599 531 aaKnown RBP eCLIP10.99□□□□□ -0.65
SHMT2-235ENST00000557740 TGFBR1P36897 503 aa10.99□□□□□ -0.65
SHMT2-235ENST00000557740 TM4SF20Q53R12 229 aa10.99□□□□□ -0.65
SHMT2-235ENST00000557740 UNQ9165/PRO28630Q6UXU0 137 aa10.99□□□□□ -0.65
SHMT2-235ENST00000557740 RBPMS2Q6ZRY4 209 aaKnown RBP10.99□□□□□ -0.65
SHMT2-235ENST00000557740 HSD17B13Q7Z5P4 300 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-235ENST00000557740 OR10W1Q8NGF6 305 aa10.99□□□□□ -0.65
SHMT2-235ENST00000557740 OR1L8Q8NGR8 309 aa10.99□□□□□ -0.65
SHMT2-235ENST00000557740 HINT2Q9BX68 163 aa10.99□□□□□ -0.65
SHMT2-235ENST00000557740 ANAPC10Q9UM13 185 aa10.99□□□□□ -0.65
SHMT2-235ENST00000557740 DYNC2H1Q8NCM8 4307 aaKnown RBP10.98□□□□□ -0.65
SHMT2-235ENST00000557740 IGHV3-35A0A0C4DH35 117 aa10.98□□□□□ -0.65
SHMT2-235ENST00000557740 PGLYRP1O75594 196 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-235ENST00000557740 F2RP25116 425 aa10.98□□□□□ -0.65
SHMT2-235ENST00000557740 RPS19P39019 145 aaKnown RBP10.98□□□□□ -0.65
SHMT2-235ENST00000557740 LSM3P62310 102 aaKnown RBP10.98□□□□□ -0.65
SHMT2-235ENST00000557740 ZNF585BQ52M93 769 aa10.98□□□□□ -0.65
SHMT2-235ENST00000557740 DHRS11Q6UWP2 260 aa10.98□□□□□ -0.65
SHMT2-235ENST00000557740 VN1R17PQ8TDU5 208 aa10.98□□□□□ -0.65
SHMT2-235ENST00000557740 LSM10Q969L4 123 aaKnown RBP10.98□□□□□ -0.65
SHMT2-235ENST00000557740 TRAV25A0A0B4J276 109 aa10.97□□□□□ -0.65
SHMT2-235ENST00000557740 TEX50A0A1B0GTY4 177 aa10.97□□□□□ -0.65
SHMT2-235ENST00000557740 GPR31O00270 319 aa10.97□□□□□ -0.65
SHMT2-235ENST00000557740 TGOLN2O43493 480 aa10.97□□□□□ -0.65
SHMT2-235ENST00000557740 SNAPC5O75971 98 aa10.97□□□□□ -0.65
SHMT2-235ENST00000557740 JTBO76095 146 aa10.97□□□□□ -0.65
SHMT2-235ENST00000557740 KRASP01116 189 aa10.97□□□□□ -0.65
SHMT2-235ENST00000557740 S100GP29377 79 aa10.97□□□□□ -0.65
SHMT2-235ENST00000557740 PRSS3P35030 304 aa10.97□□□□□ -0.65
SHMT2-235ENST00000557740 LPAR6P43657 344 aa10.97□□□□□ -0.65
SHMT2-235ENST00000557740 ELLP55199 621 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-235ENST00000557740 WT1-ASQ06250 92 aa10.97□□□□□ -0.65
SHMT2-235ENST00000557740 SLC25A24Q6NUK1 477 aa10.97□□□□□ -0.65
SHMT2-235ENST00000557740 OR1L6Q8NGR2 347 aa10.97□□□□□ -0.65
SHMT2-235ENST00000557740 DGCR14Q96DF8 476 aaKnown RBP10.97□□□□□ -0.65
SHMT2-235ENST00000557740 GGTLC1Q9BX51 225 aa10.97□□□□□ -0.65
SHMT2-235ENST00000557740 FXYD6Q9H0Q3 95 aa10.97□□□□□ -0.65
SHMT2-235ENST00000557740 MRPL27Q9P0M9 148 aaKnown RBP10.97□□□□□ -0.65
SHMT2-235ENST00000557740 OR51B2Q9Y5P1 312 aa10.97□□□□□ -0.65
SHMT2-235ENST00000557740 A0A087WXM4 84 aa10.96□□□□□ -0.65
SHMT2-235ENST00000557740 OR2T8A6NH00 312 aa10.96□□□□□ -0.65
SHMT2-235ENST00000557740 SERPINE2P07093 398 aa10.96□□□□□ -0.65
SHMT2-235ENST00000557740 NAT1P18440 290 aa10.96□□□□□ -0.65
SHMT2-235ENST00000557740 HRH1P35367 487 aa10.96□□□□□ -0.65
SHMT2-235ENST00000557740 G6PCP35575 357 aa10.96□□□□□ -0.65
SHMT2-235ENST00000557740 SLC38A6Q8IZM9 456 aa10.96□□□□□ -0.65
SHMT2-235ENST00000557740 OR6F1Q8NGZ6 308 aa10.96□□□□□ -0.65
SHMT2-235ENST00000557740 FCAMRQ8WWV6 532 aa10.96□□□□□ -0.65
SHMT2-235ENST00000557740 TMEM190Q8WZ59 177 aa10.96□□□□□ -0.65
SHMT2-235ENST00000557740 YIPF6Q96EC8 236 aa10.96□□□□□ -0.65
SHMT2-235ENST00000557740 BSCL2Q96G97 398 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-235ENST00000557740 ZNF436Q9C0F3 470 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-235ENST00000557740 DAZ1Q9NQZ3 744 aaKnown RBP10.96□□□□□ -0.65
SHMT2-235ENST00000557740 NDUFA4L2Q9NRX3 87 aa10.96□□□□□ -0.65
SHMT2-235ENST00000557740 PRNDQ9UKY0 176 aa10.96□□□□□ -0.65
SHMT2-235ENST00000557740 NSG2Q9Y328 171 aa10.96□□□□□ -0.65
SHMT2-235ENST00000557740 F11RQ9Y624 299 aaKnown RBP10.96□□□□□ -0.65
SHMT2-235ENST00000557740 STARD9Q9P2P6 4700 aa10.95□□□□□ -0.66
SHMT2-235ENST00000557740 LOC102724200A0A096LPH7 203 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-235ENST00000557740 IGHV3-21A0A0B4J1V1 117 aa10.95□□□□□ -0.66
SHMT2-235ENST00000557740 C8orf88P0DMB2 117 aa10.95□□□□□ -0.66
SHMT2-235ENST00000557740 HLA-DMAP28067 261 aa10.95□□□□□ -0.66
SHMT2-235ENST00000557740 SPSB3Q6PJ21 355 aa10.95□□□□□ -0.66
SHMT2-235ENST00000557740 OR5B3Q8NH48 314 aa10.95□□□□□ -0.66
SHMT2-235ENST00000557740 SLC25A46Q96AG3 418 aa10.95□□□□□ -0.66
SHMT2-235ENST00000557740 TSC22D3Q99576 134 aa10.95□□□□□ -0.66
SHMT2-235ENST00000557740 FKBP11Q9NYL4 201 aa10.95□□□□□ -0.66
SHMT2-235ENST00000557740 C21orf62Q9NYP8 219 aa10.95□□□□□ -0.66
SHMT2-235ENST00000557740 SMIM31A0A1B0GVY4 71 aa10.94□□□□□ -0.66
SHMT2-235ENST00000557740 TNFAIP8O95379 198 aa10.94□□□□□ -0.66
SHMT2-235ENST00000557740 EIF4EP06730 217 aaKnown RBP10.94□□□□□ -0.66
SHMT2-235ENST00000557740 TSPAN5P62079 268 aa10.94□□□□□ -0.66
SHMT2-235ENST00000557740 PHLDA2Q53GA4 152 aa10.94□□□□□ -0.66
SHMT2-235ENST00000557740 Q56UQ5 140 aa10.94□□□□□ -0.66
SHMT2-235ENST00000557740 CADM3Q8N126 398 aa10.94□□□□□ -0.66
SHMT2-235ENST00000557740 OR2C3Q8N628 320 aa10.94□□□□□ -0.66
SHMT2-235ENST00000557740 UBAC2Q8NBM4 344 aa10.94□□□□□ -0.66
SHMT2-235ENST00000557740 TMEM56Q96MV1 263 aa10.94□□□□□ -0.66
SHMT2-235ENST00000557740 ATP6V0BQ99437 205 aa10.94□□□□□ -0.66
SHMT2-235ENST00000557740 SPAG8Q99932 426 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-235ENST00000557740 C20orf24Q9BUV8 137 aa10.94□□□□□ -0.66
SHMT2-235ENST00000557740 C5orf66Q9H5L9 145 aa10.94□□□□□ -0.66
SHMT2-235ENST00000557740 COMMD3Q9UBI1 195 aa10.94□□□□□ -0.66
SHMT2-235ENST00000557740 CSMD3Q7Z407 3707 aa10.94□□□□□ -0.66
SHMT2-235ENST00000557740 C15orf61A6NNL5 157 aa10.93□□□□□ -0.66
SHMT2-235ENST00000557740 NDUFA4O00483 81 aa10.93□□□□□ -0.66
SHMT2-235ENST00000557740 MFAP2P55001 183 aa10.93□□□□□ -0.66
SHMT2-235ENST00000557740 LAMTOR1Q6IAA8 161 aa10.93□□□□□ -0.66
SHMT2-235ENST00000557740 LPCAT3Q6P1A2 487 aa10.93□□□□□ -0.66
SHMT2-235ENST00000557740 SNX29P2Q8IUI4 249 aa10.93□□□□□ -0.66
SHMT2-235ENST00000557740 GPX8Q8TED1 209 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms