RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 PLXNB1O43157 2135 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 CRYBG3Q68DQ2 2970 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 RELNP78509 3460 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 CENPEQ02224 2701 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 SMG1Q96Q15 3661 aaKnown RBP2.17□□□□□ -2.06
VRK1-207ENST00000557352 CSPG4Q6UVK1 2322 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 PIGBOS1A0A0B4J2F0 54 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 IGKV1-12A0A0C4DH73 117 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 FAM240BA0A1B0GVZ2 78 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 FUOMA2VDF0 154 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 ZNF850A8MQ14 1090 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 SNRPGP15A8MWD9 76 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 NBR2O15453 112 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 PDCD6O75340 191 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 RBBP9O75884 186 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 SNAPC5O75971 98 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 NDUFB6O95139 128 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 NAPSAO96009 420 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 CYB5AP00167 134 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 IGKV1D-12P01611 117 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 IL5P05113 134 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 CSN2P05814 226 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 AKAIN1P0CW23 69 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 PGA5P0DJD9 388 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 RPA2P15927 270 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 HLA-DMAP28067 261 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 INPP1P49441 399 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 BCAP31P51572 246 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 CLDN12P56749 244 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 KLF3P57682 345 aaPredicted RBP2.17□□□□□ -2.06
VRK1-207ENST00000557352 TAS2R46P59540 309 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 TFF3Q07654 80 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 SNTB2Q13425 540 aaKnown RBP2.17□□□□□ -2.06
VRK1-207ENST00000557352 MOBPQ13875 183 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 RSU1Q15404 277 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 SURF2Q15527 256 aaPredicted RBP2.17□□□□□ -2.06
VRK1-207ENST00000557352 KCNJ8Q15842 424 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 LY6EQ16553 131 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 BEX5Q5H9J7 111 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 C9orf135Q5VTT2 229 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 PLCXD3Q63HM9 321 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 ZNF880Q6PDB4 577 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 IGFL1Q6UW32 110 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 LHFPL1Q86WI0 220 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 CALHM1Q8IU99 346 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 OSR2Q8N2R0 312 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 RPRMLQ8N4K4 120 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 ZDHHC22Q8N966 263 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 TMEM104Q8NE00 496 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 OR13G1Q8NGZ3 307 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 SLC25A40Q8TBP6 338 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 ENKURQ8TC29 256 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 TNFAIP8L1Q8WVP5 186 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 SEC22AQ96IW7 307 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 HIST1H4GQ99525 98 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 GPER1Q99527 375 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 PRRT1Q99946 306 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 NRIP2Q9BQI9 281 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 ADAT1Q9BUB4 502 aaKnown RBP2.17□□□□□ -2.06
VRK1-207ENST00000557352 SELENOIQ9C0D9 397 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 OR2J1Q9GZK6 312 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 DNTTIP1Q9H147 329 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 ATG5Q9H1Y0 275 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 OR51I2Q9H344 312 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 SLC25A22Q9H936 323 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 TMEM100Q9NV29 134 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 PTTG3PQ9NZH4 202 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 OPN4Q9UHM6 478 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 SCP2D1Q9UJQ7 156 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 MRPS7Q9Y2R9 242 aaKnown RBP2.17□□□□□ -2.06
VRK1-207ENST00000557352 NAV3Q8IVL0 2385 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 TACC2O95359 2948 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 CR1P17927 2039 aa2.17□□□□□ -2.06
VRK1-207ENST00000557352 UTP20O75691 2785 aaKnown RBP2.16□□□□□ -2.06
VRK1-207ENST00000557352 ABCA1O95477 2261 aa2.16□□□□□ -2.06
VRK1-207ENST00000557352 A0A0B4J2A0 478 aa2.16□□□□□ -2.06
VRK1-207ENST00000557352 KIR2DS1A0A191URI9 304 aa2.16□□□□□ -2.06
VRK1-207ENST00000557352 NKX2-6A6NCS4 301 aa2.16□□□□□ -2.06
VRK1-207ENST00000557352 TMEM235A6NFC5 223 aa2.16□□□□□ -2.06
VRK1-207ENST00000557352 DPRXA6NFQ7 191 aa2.16□□□□□ -2.06
VRK1-207ENST00000557352 VGLL3A8MV65 326 aa2.16□□□□□ -2.06
VRK1-207ENST00000557352 ZNF736B4DX44 427 aaPredicted RBP2.16□□□□□ -2.06
VRK1-207ENST00000557352 EEF1E1-BLOC1S5C9J1V9 151 aa2.16□□□□□ -2.06
VRK1-207ENST00000557352 TRAPPC2LH3BP13 241 aa2.16□□□□□ -2.06
VRK1-207ENST00000557352 CCL21O00585 134 aa2.16□□□□□ -2.06
VRK1-207ENST00000557352 SOCS1O15524 211 aa2.16□□□□□ -2.06
VRK1-207ENST00000557352 EEF1E1O43324 174 aaKnown RBP2.16□□□□□ -2.06
VRK1-207ENST00000557352 TIMM8AO60220 97 aaPredicted RBP2.16□□□□□ -2.06
VRK1-207ENST00000557352 CRTAPO75718 401 aaPredicted RBP2.16□□□□□ -2.06
VRK1-207ENST00000557352 DHFRP00374 187 aa2.16□□□□□ -2.06
VRK1-207ENST00000557352 LHBP01229 141 aa2.16□□□□□ -2.06
VRK1-207ENST00000557352 IGKV1-17P01599 117 aa2.16□□□□□ -2.06
VRK1-207ENST00000557352 TCRBP04435 133 aa2.16□□□□□ -2.06
VRK1-207ENST00000557352 CD3GP09693 182 aa2.16□□□□□ -2.06
VRK1-207ENST00000557352 CTXN2P0C2S0 81 aa2.16□□□□□ -2.06
VRK1-207ENST00000557352 ZNF735P0CB33 412 aa2.16□□□□□ -2.06
VRK1-207ENST00000557352 CCL2P13500 99 aa2.16□□□□□ -2.06
VRK1-207ENST00000557352 HLA-GP17693 338 aa2.16□□□□□ -2.06
VRK1-207ENST00000557352 CCNOP22674 350 aa2.16□□□□□ -2.06
VRK1-207ENST00000557352 LOXP28300 417 aaPredicted RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms