RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 DCUN1D4Q92564 292 aa9.64□□□□□ -0.87
SLIRP-209ENST00000557342 MRGPRFQ96AM1 343 aa9.64□□□□□ -0.87
SLIRP-209ENST00000557342 SEC22AQ96IW7 307 aa9.64□□□□□ -0.87
SLIRP-209ENST00000557342 CCDC32Q9BV29 185 aa9.64□□□□□ -0.87
SLIRP-209ENST00000557342 PALMDQ9NP74 551 aa9.64□□□□□ -0.87
SLIRP-209ENST00000557342 MCUBQ9NWR8 336 aa9.64□□□□□ -0.87
SLIRP-209ENST00000557342 TEX50A0A1B0GTY4 177 aa9.63□□□□□ -0.87
SLIRP-209ENST00000557342 CGB1A6NKQ9 187 aa9.63□□□□□ -0.87
SLIRP-209ENST00000557342 WIPF1O43516 503 aa9.63□□□□□ -0.87
SLIRP-209ENST00000557342 PRH1P02810 166 aa9.63□□□□□ -0.87
SLIRP-209ENST00000557342 DEFA4P12838 97 aa9.63□□□□□ -0.87
SLIRP-209ENST00000557342 MYOD1P15172 320 aa9.63□□□□□ -0.87
SLIRP-209ENST00000557342 AREGP15514 252 aa9.63□□□□□ -0.87
SLIRP-209ENST00000557342 INSL3P51460 131 aa9.63□□□□□ -0.87
SLIRP-209ENST00000557342 SLURP1P55000 103 aa9.63□□□□□ -0.87
SLIRP-209ENST00000557342 EGFEM1PQ0D2K5 195 aa9.63□□□□□ -0.87
SLIRP-209ENST00000557342 TRIM16LQ309B1 348 aa9.63□□□□□ -0.87
SLIRP-209ENST00000557342 OR5B3Q8NH48 314 aa9.63□□□□□ -0.87
SLIRP-209ENST00000557342 OR4A16Q8NH70 328 aa9.63□□□□□ -0.87
SLIRP-209ENST00000557342 TRIM63Q969Q1 353 aa9.63□□□□□ -0.87
SLIRP-209ENST00000557342 TMEM56Q96MV1 263 aa9.63□□□□□ -0.87
SLIRP-209ENST00000557342 TP53RKQ96S44 253 aa9.63□□□□□ -0.87
SLIRP-209ENST00000557342 RTBDNQ9BSG5 229 aaPredicted RBP9.63□□□□□ -0.87
SLIRP-209ENST00000557342 PEF1Q9UBV8 284 aaKnown RBP9.63□□□□□ -0.87
SLIRP-209ENST00000557342 GPR132Q9UNW8 380 aa9.63□□□□□ -0.87
SLIRP-209ENST00000557342 OR51B2Q9Y5P1 312 aa9.63□□□□□ -0.87
SLIRP-209ENST00000557342 TEX13DA0A0J9YY54 714 aaPredicted RBP9.62□□□□□ -0.87
SLIRP-209ENST00000557342 IGLC7A0M8Q6 106 aa9.62□□□□□ -0.87
SLIRP-209ENST00000557342 ANKRD34BA5PLL1 514 aa9.62□□□□□ -0.87
SLIRP-209ENST00000557342 C15orf61A6NNL5 157 aa9.62□□□□□ -0.87
SLIRP-209ENST00000557342 OR2J3O76001 311 aa9.62□□□□□ -0.87
SLIRP-209ENST00000557342 IGKV1-39P01597 117 aa9.62□□□□□ -0.87
SLIRP-209ENST00000557342 IGKV1D-39P04432 117 aa9.62□□□□□ -0.87
SLIRP-209ENST00000557342 UCP1P25874 307 aa9.62□□□□□ -0.87
SLIRP-209ENST00000557342 AKR1C2P52895 323 aa9.62□□□□□ -0.87
SLIRP-209ENST00000557342 DHODHQ02127 395 aa9.62□□□□□ -0.87
SLIRP-209ENST00000557342 EXOSC2Q13868 293 aaKnown RBP9.62□□□□□ -0.87
SLIRP-209ENST00000557342 KLF9Q13886 244 aaPredicted RBP9.62□□□□□ -0.87
SLIRP-209ENST00000557342 KLK9Q2XQG4 91 aa9.62□□□□□ -0.87
SLIRP-209ENST00000557342 C15orf32Q32M92 178 aa9.62□□□□□ -0.87
SLIRP-209ENST00000557342 DLX4Q92988 240 aaPredicted RBP9.62□□□□□ -0.87
SLIRP-209ENST00000557342 LSM10Q969L4 123 aaKnown RBP9.62□□□□□ -0.87
SLIRP-209ENST00000557342 SDHCQ99643 169 aaPredicted RBP9.62□□□□□ -0.87
SLIRP-209ENST00000557342 C5orf66Q9H5L9 145 aa9.62□□□□□ -0.87
SLIRP-209ENST00000557342 NAA60Q9H7X0 242 aa9.62□□□□□ -0.87
SLIRP-209ENST00000557342 NDUFA4L2Q9NRX3 87 aa9.62□□□□□ -0.87
SLIRP-209ENST00000557342 TMEM14BQ9NUH8 114 aa9.62□□□□□ -0.87
SLIRP-209ENST00000557342 THYN1Q9P016 225 aa9.62□□□□□ -0.87
SLIRP-209ENST00000557342 FBXL7Q9UJT9 491 aa9.62□□□□□ -0.87
SLIRP-209ENST00000557342 KLK9Q9UKQ9 250 aa9.62□□□□□ -0.87
SLIRP-209ENST00000557342 NSG2Q9Y328 171 aa9.62□□□□□ -0.87
SLIRP-209ENST00000557342 NOTCH3Q9UM47 2321 aa9.61□□□□□ -0.87
SLIRP-209ENST00000557342 CRYM-AS1A6NIL9 109 aa9.61□□□□□ -0.87
SLIRP-209ENST00000557342 RBMXL2O75526 392 aaKnown RBP9.61□□□□□ -0.87
SLIRP-209ENST00000557342 REG1AP05451 166 aa9.61□□□□□ -0.87
SLIRP-209ENST00000557342 HOXD3P31249 432 aaPredicted RBP9.61□□□□□ -0.87
SLIRP-209ENST00000557342 INPP1P49441 399 aa9.61□□□□□ -0.87
SLIRP-209ENST00000557342 MECP2P51608 486 aaKnown RBP9.61□□□□□ -0.87
SLIRP-209ENST00000557342 DEFA5Q01523 94 aa9.61□□□□□ -0.87
SLIRP-209ENST00000557342 DCTN2Q13561 401 aaKnown RBP9.61□□□□□ -0.87
SLIRP-209ENST00000557342 TATDN3Q17R31 274 aa9.61□□□□□ -0.87
SLIRP-209ENST00000557342 SP6Q3SY56 376 aa9.61□□□□□ -0.87
SLIRP-209ENST00000557342 ZNF429Q86V71 674 aa9.61□□□□□ -0.87
SLIRP-209ENST00000557342 SGPP2Q8IWX5 399 aa9.61□□□□□ -0.87
SLIRP-209ENST00000557342 RRNAD1Q96FB5 475 aaKnown RBP9.61□□□□□ -0.87
SLIRP-209ENST00000557342 FANCD2OSQ96PS1 177 aa9.61□□□□□ -0.87
SLIRP-209ENST00000557342 ELOVL1Q9BW60 279 aa9.61□□□□□ -0.87
SLIRP-209ENST00000557342 HINT2Q9BX68 163 aa9.61□□□□□ -0.87
SLIRP-209ENST00000557342 AURKAIP1Q9NWT8 199 aaPredicted RBP9.61□□□□□ -0.87
SLIRP-209ENST00000557342 KCNIP3Q9Y2W7 256 aa9.61□□□□□ -0.87
SLIRP-209ENST00000557342 IGLV11-55A0A075B6I3 123 aa9.6□□□□□ -0.87
SLIRP-209ENST00000557342 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.6□□□□□ -0.87
SLIRP-209ENST00000557342 UPK1BO75841 260 aa9.6□□□□□ -0.87
SLIRP-209ENST00000557342 CDS2O95674 445 aa9.6□□□□□ -0.87
SLIRP-209ENST00000557342 PRB2P02812 416 aaPredicted RBP9.6□□□□□ -0.87
SLIRP-209ENST00000557342 OR5AC1P0C628 307 aa9.6□□□□□ -0.87
SLIRP-209ENST00000557342 OR13C7P0DN81 318 aa9.6□□□□□ -0.87
SLIRP-209ENST00000557342 RPEL1Q2QD12 228 aa9.6□□□□□ -0.87
SLIRP-209ENST00000557342 ZNF57Q68EA5 555 aaPredicted RBP9.6□□□□□ -0.87
SLIRP-209ENST00000557342 ACSM6Q6P461 480 aa9.6□□□□□ -0.87
SLIRP-209ENST00000557342 OR10W1Q8NGF6 305 aa9.6□□□□□ -0.87
SLIRP-209ENST00000557342 OR1L6Q8NGR2 347 aa9.6□□□□□ -0.87
SLIRP-209ENST00000557342 RNASE11Q8TAA1 199 aaKnown RBP9.6□□□□□ -0.87
SLIRP-209ENST00000557342 EEF1AKMT3Q96AZ1 226 aa9.6□□□□□ -0.87
SLIRP-209ENST00000557342 CXorf58Q96LI9 332 aa9.6□□□□□ -0.87
SLIRP-209ENST00000557342 TMEM222Q9H0R3 208 aa9.6□□□□□ -0.87
SLIRP-209ENST00000557342 TRBV7-1A0A0A6YYK4 115 aa9.59□□□□□ -0.87
SLIRP-209ENST00000557342 SAP30O75446 220 aa9.59□□□□□ -0.87
SLIRP-209ENST00000557342 NDUFB8O95169 186 aa9.59□□□□□ -0.87
SLIRP-209ENST00000557342 IGKV1-5P01602 117 aa9.59□□□□□ -0.87
SLIRP-209ENST00000557342 IL7P13232 177 aa9.59□□□□□ -0.87
SLIRP-209ENST00000557342 KRTAP10-11P60412 298 aa9.59□□□□□ -0.87
SLIRP-209ENST00000557342 HSPE1P61604 102 aaKnown RBP9.59□□□□□ -0.87
SLIRP-209ENST00000557342 PRCDQ00LT1 54 aa9.59□□□□□ -0.87
SLIRP-209ENST00000557342 WT1-ASQ06250 92 aa9.59□□□□□ -0.87
SLIRP-209ENST00000557342 KLF5Q13887 457 aaPredicted RBP9.59□□□□□ -0.87
SLIRP-209ENST00000557342 TRIQKQ629K1 86 aa9.59□□□□□ -0.87
SLIRP-209ENST00000557342 FAM219AQ8IW50 185 aa9.59□□□□□ -0.87
SLIRP-209ENST00000557342 MRAPQ8TCY5 172 aa9.59□□□□□ -0.87
SLIRP-209ENST00000557342 GLYATL2Q8WU03 294 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms