RNA–Protein interactions for RNA: ENST00000557320.5

PAPOLA-223, Transcript of poly(A) polymerase alpha, human

TSL 1 (best) BASIC

Gene PAPOLA, Length 3,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAPOLA-223	ENST00000557320	EP300	Q09472	2414 aa	Predicted RBP	12.5	□□□□□ -0.41
PAPOLA-223	ENST00000557320	SHISA2	Q6UWI4	295 aa		12.5	□□□□□ -0.41
PAPOLA-223	ENST00000557320	SLC37A2	Q8TED4	501 aa		12.5	□□□□□ -0.41
PAPOLA-223	ENST00000557320	IGKV1-12	A0A0C4DH73	117 aa		12.5	□□□□□ -0.41
PAPOLA-223	ENST00000557320	KIR2DS1	A0A191URI9	304 aa		12.5	□□□□□ -0.41
PAPOLA-223	ENST00000557320	C2orf70	A6NJV1	201 aa		12.5	□□□□□ -0.41
PAPOLA-223	ENST00000557320	IGKV1D-12	P01611	117 aa		12.5	□□□□□ -0.41
PAPOLA-223	ENST00000557320	KIR2DS4	P43632	304 aa		12.5	□□□□□ -0.41
PAPOLA-223	ENST00000557320	C17orf67	Q0P5P2	114 aa		12.5	□□□□□ -0.41
PAPOLA-223	ENST00000557320	KIR2DS1	Q14954	304 aa		12.5	□□□□□ -0.41
PAPOLA-223	ENST00000557320	DTX1	Q86Y01	620 aa		12.5	□□□□□ -0.41
PAPOLA-223	ENST00000557320	OR5A1	Q8NGJ0	315 aa		12.5	□□□□□ -0.41
PAPOLA-223	ENST00000557320	SSBP3	Q9BWW4	388 aa	Predicted RBP	12.5	□□□□□ -0.41
PAPOLA-223	ENST00000557320		V9GYV3	84 aa		12.5	□□□□□ -0.41
PAPOLA-223	ENST00000557320	IGKV1-27	A0A075B6S5	117 aa		12.49	□□□□□ -0.41
PAPOLA-223	ENST00000557320	LILRA5	A6NI73	299 aa		12.49	□□□□□ -0.41
PAPOLA-223	ENST00000557320	FTH1P19	P0C7X4	201 aa		12.49	□□□□□ -0.41
PAPOLA-223	ENST00000557320	GUSBP11	Q6P575	273 aa		12.49	□□□□□ -0.41
PAPOLA-223	ENST00000557320		Q6ZPA2	131 aa		12.49	□□□□□ -0.41
PAPOLA-223	ENST00000557320	SFTPA2	Q8IWL1	248 aa		12.49	□□□□□ -0.41
PAPOLA-223	ENST00000557320	GJC3	Q8NFK1	279 aa		12.49	□□□□□ -0.41
PAPOLA-223	ENST00000557320	PNRC2	Q9NPJ4	139 aa	Known RBP	12.49	□□□□□ -0.41
PAPOLA-223	ENST00000557320	PTPRB	P23467	1997 aa		12.49	□□□□□ -0.41
PAPOLA-223	ENST00000557320	NTN3	O00634	580 aa	Predicted RBP	12.49	□□□□□ -0.41
PAPOLA-223	ENST00000557320	PSG3	Q16557	428 aa		12.49	□□□□□ -0.41
PAPOLA-223	ENST00000557320	SSBP4	Q9BWG4	385 aa	Predicted RBP	12.49	□□□□□ -0.41
PAPOLA-223	ENST00000557320	ATP23	Q9Y6H3	246 aa		12.49	□□□□□ -0.41
PAPOLA-223	ENST00000557320	PIEZO1	Q92508	2521 aa		12.49	□□□□□ -0.41
PAPOLA-223	ENST00000557320		A0A0J9YY10	115 aa		12.49	□□□□□ -0.41
PAPOLA-223	ENST00000557320	HELT	A6NFD8	242 aa		12.49	□□□□□ -0.41
PAPOLA-223	ENST00000557320	TLX3	O43711	291 aa	Predicted RBP	12.49	□□□□□ -0.41
PAPOLA-223	ENST00000557320	KIR3DS1	Q14943	382 aa		12.49	□□□□□ -0.41
PAPOLA-223	ENST00000557320	CENPW	Q5EE01	88 aa		12.49	□□□□□ -0.41
PAPOLA-223	ENST00000557320	MRAP2	Q96G30	205 aa		12.49	□□□□□ -0.41
PAPOLA-223	ENST00000557320	TNFRSF19	Q9NS68	423 aa		12.49	□□□□□ -0.41
PAPOLA-223	ENST00000557320	SYS1-DBNDD2	H3BUS1	97 aa		12.48	□□□□□ -0.41
PAPOLA-223	ENST00000557320	IGKV1-5	P01602	117 aa		12.48	□□□□□ -0.41
PAPOLA-223	ENST00000557320	PTGDS	P41222	190 aa		12.48	□□□□□ -0.41
PAPOLA-223	ENST00000557320	CCDC144NL	Q6NUI1	221 aa		12.48	□□□□□ -0.41
PAPOLA-223	ENST00000557320	SHISA6	Q6ZSJ9	500 aa		12.48	□□□□□ -0.41
PAPOLA-223	ENST00000557320	MRPL21	Q7Z2W9	205 aa	Known RBP	12.48	□□□□□ -0.41
PAPOLA-223	ENST00000557320		A0A1W2PNR3	127 aa		12.48	□□□□□ -0.41
PAPOLA-223	ENST00000557320	F2RL2	O00254	374 aa		12.48	□□□□□ -0.41
PAPOLA-223	ENST00000557320	FOXA3	P55318	350 aa	Predicted RBP	12.48	□□□□□ -0.41
PAPOLA-223	ENST00000557320	LINC00173	Q6ZV60	143 aa		12.48	□□□□□ -0.41
PAPOLA-223	ENST00000557320	FLVCR1-AS1	Q8TAF5	88 aa		12.48	□□□□□ -0.41
PAPOLA-223	ENST00000557320	SPTSSA	Q969W0	71 aa		12.48	□□□□□ -0.41
PAPOLA-223	ENST00000557320	USF3	Q68DE3	2245 aa		12.48	□□□□□ -0.41
PAPOLA-223	ENST00000557320	RIF1	Q5UIP0	2472 aa	Known RBP	12.47	□□□□□ -0.41
PAPOLA-223	ENST00000557320	TMEM150C	B9EJG8	249 aa		12.47	□□□□□ -0.41
PAPOLA-223	ENST00000557320	IGFBP2	P18065	325 aa		12.47	□□□□□ -0.41
PAPOLA-223	ENST00000557320	RBM11	P57052	281 aa	Known RBP	12.47	□□□□□ -0.41
PAPOLA-223	ENST00000557320	HBZ	P02008	142 aa		12.47	□□□□□ -0.41
PAPOLA-223	ENST00000557320	TMEM14EP	Q6UXP3	125 aa		12.47	□□□□□ -0.41
PAPOLA-223	ENST00000557320	LHFPL2	Q6ZUX7	228 aa		12.47	□□□□□ -0.41
PAPOLA-223	ENST00000557320	SPACA3	Q8IXA5	215 aa		12.47	□□□□□ -0.41
PAPOLA-223	ENST00000557320	CNIH1	O95406	144 aa		12.47	□□□□□ -0.41
PAPOLA-223	ENST00000557320	HHEX	Q03014	270 aa		12.47	□□□□□ -0.41
PAPOLA-223	ENST00000557320	IBA57	Q5T440	356 aa	Known RBP	12.47	□□□□□ -0.41
PAPOLA-223	ENST00000557320	FA2H	Q7L5A8	372 aa		12.47	□□□□□ -0.41
PAPOLA-223	ENST00000557320	TXNDC17	Q9BRA2	123 aa		12.47	□□□□□ -0.41
PAPOLA-223	ENST00000557320	MAP1LC3C	Q9BXW4	147 aa		12.47	□□□□□ -0.41
PAPOLA-223	ENST00000557320	IL36RN	Q9UBH0	155 aa		12.47	□□□□□ -0.41
PAPOLA-223	ENST00000557320	ADAMTS20	P59510	1910 aa		12.46	□□□□□ -0.41
PAPOLA-223	ENST00000557320		H3BRM9	83 aa		12.46	□□□□□ -0.41
PAPOLA-223	ENST00000557320	MYF5	P13349	255 aa		12.46	□□□□□ -0.41
PAPOLA-223	ENST00000557320	CEACAM16	Q2WEN9	425 aa		12.46	□□□□□ -0.41
PAPOLA-223	ENST00000557320	ADAMTSL5	Q6ZMM2	481 aa		12.46	□□□□□ -0.41
PAPOLA-223	ENST00000557320	ZNF257	Q9Y2Q1	563 aa		12.46	□□□□□ -0.41
PAPOLA-223	ENST00000557320	OR2W1	Q9Y3N9	320 aa		12.46	□□□□□ -0.41
PAPOLA-223	ENST00000557320	YTHDF2	Q9Y5A9	579 aa	Known RBP	12.46	□□□□□ -0.41
PAPOLA-223	ENST00000557320	DMXL1	Q9Y485	3027 aa		12.46	□□□□□ -0.41
PAPOLA-223	ENST00000557320	LOC102723996	A0A087X1L8	192 aa		12.46	□□□□□ -0.42
PAPOLA-223	ENST00000557320	FRG2C	A6NGY1	282 aa		12.46	□□□□□ -0.42
PAPOLA-223	ENST00000557320	ZG16	O60844	167 aa		12.46	□□□□□ -0.42
PAPOLA-223	ENST00000557320	CXorf1	O96002	111 aa		12.46	□□□□□ -0.42
PAPOLA-223	ENST00000557320	IGKV1-39	P01597	117 aa		12.46	□□□□□ -0.42
PAPOLA-223	ENST00000557320	IGKV1D-39	P04432	117 aa		12.46	□□□□□ -0.42
PAPOLA-223	ENST00000557320	CLEC3B	P05452	202 aa		12.46	□□□□□ -0.42
PAPOLA-223	ENST00000557320	TM4SF20	Q53R12	229 aa		12.46	□□□□□ -0.42
PAPOLA-223	ENST00000557320	ASPHD1	Q5U4P2	390 aa		12.46	□□□□□ -0.42
PAPOLA-223	ENST00000557320	FGFRL1	Q8N441	504 aa		12.46	□□□□□ -0.42
PAPOLA-223	ENST00000557320	PSMB11	A5LHX3	300 aa		12.45	□□□□□ -0.42
PAPOLA-223	ENST00000557320	CELA3A	P09093	270 aa		12.45	□□□□□ -0.42
PAPOLA-223	ENST00000557320	TPRX1	Q8N7U7	411 aa		12.45	□□□□□ -0.42
PAPOLA-223	ENST00000557320	NHLRC2	Q8NBF2	726 aa		12.45	□□□□□ -0.42
PAPOLA-223	ENST00000557320	TMEM116	Q8NCL8	245 aa		12.45	□□□□□ -0.42
PAPOLA-223	ENST00000557320	C19orf24	Q9BVV8	132 aa		12.45	□□□□□ -0.42
PAPOLA-223	ENST00000557320	HLA-DRB1	P01911	266 aa		12.45	□□□□□ -0.42
PAPOLA-223	ENST00000557320	RNFT1	Q5M7Z0	435 aa		12.45	□□□□□ -0.42
PAPOLA-223	ENST00000557320	ZNF611	Q8N823	705 aa		12.45	□□□□□ -0.42
PAPOLA-223	ENST00000557320	OR1L3	Q8NH93	324 aa		12.45	□□□□□ -0.42
PAPOLA-223	ENST00000557320	SSMEM1	Q8WWF3	244 aa		12.45	□□□□□ -0.42
PAPOLA-223	ENST00000557320	ZDHHC16	Q969W1	377 aa		12.45	□□□□□ -0.42
PAPOLA-223	ENST00000557320	TRIB1	Q96RU8	372 aa		12.45	□□□□□ -0.42
PAPOLA-223	ENST00000557320	IGHV1OR21-1	A0A087WYE8	117 aa		12.45	□□□□□ -0.42
PAPOLA-223	ENST00000557320		A0A1W2PQM1	296 aa		12.45	□□□□□ -0.42
PAPOLA-223	ENST00000557320	ANKRD30BL	A7E2S9	258 aa		12.45	□□□□□ -0.42
PAPOLA-223	ENST00000557320	CEBPD	P49716	269 aa	Predicted RBP	12.45	□□□□□ -0.42
PAPOLA-223	ENST00000557320	C16orf47	Q6ZP98	133 aa	Predicted RBP	12.45	□□□□□ -0.42

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