RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 MEIS3P1A6NDR6 274 aa11.89□□□□□ -0.51
TUBB3-213ENST00000557262 JTBO76095 146 aa11.89□□□□□ -0.51
TUBB3-213ENST00000557262 S1PR2O95136 353 aa11.89□□□□□ -0.51
TUBB3-213ENST00000557262 TRAPPC2P0DI81 140 aa11.89□□□□□ -0.51
TUBB3-213ENST00000557262 TRAPPC2BP0DI82 140 aa11.89□□□□□ -0.51
TUBB3-213ENST00000557262 GPR183P32249 361 aa11.89□□□□□ -0.51
TUBB3-213ENST00000557262 BTNL8Q6UX41 500 aa11.89□□□□□ -0.51
TUBB3-213ENST00000557262 RBPMS2Q6ZRY4 209 aaKnown RBP11.89□□□□□ -0.51
TUBB3-213ENST00000557262 HSD17B13Q7Z5P4 300 aaPredicted RBP11.89□□□□□ -0.51
TUBB3-213ENST00000557262 OR10W1Q8NGF6 305 aa11.89□□□□□ -0.51
TUBB3-213ENST00000557262 IFT46Q9NQC8 304 aa11.89□□□□□ -0.51
TUBB3-213ENST00000557262 EHFQ9NZC4 300 aa11.89□□□□□ -0.51
TUBB3-213ENST00000557262 BIRC6Q9NR09 4857 aa11.89□□□□□ -0.51
TUBB3-213ENST00000557262 LOC102724200A0A096LPH7 203 aaPredicted RBP11.88□□□□□ -0.51
TUBB3-213ENST00000557262 IGHV3-35A0A0C4DH35 117 aa11.88□□□□□ -0.51
TUBB3-213ENST00000557262 PGLYRP1O75594 196 aaPredicted RBP11.88□□□□□ -0.51
TUBB3-213ENST00000557262 SERPINE2P07093 398 aa11.88□□□□□ -0.51
TUBB3-213ENST00000557262 OR13C7P0DN81 318 aa11.88□□□□□ -0.51
TUBB3-213ENST00000557262 RPA2P15927 270 aa11.88□□□□□ -0.51
TUBB3-213ENST00000557262 F2RP25116 425 aa11.88□□□□□ -0.51
TUBB3-213ENST00000557262 RFX2P48378 723 aa11.88□□□□□ -0.51
TUBB3-213ENST00000557262 ERVK-16P61578 105 aa11.88□□□□□ -0.51
TUBB3-213ENST00000557262 SLC25A24Q6NUK1 477 aa11.88□□□□□ -0.51
TUBB3-213ENST00000557262 OR1L8Q8NGR8 309 aa11.88□□□□□ -0.51
TUBB3-213ENST00000557262 ZNF2Q9BSG1 426 aaPredicted RBP11.88□□□□□ -0.51
TUBB3-213ENST00000557262 GGTLC1Q9BX51 225 aa11.88□□□□□ -0.51
TUBB3-213ENST00000557262 ZNF436Q9C0F3 470 aaPredicted RBP11.88□□□□□ -0.51
TUBB3-213ENST00000557262 TGOLN2O43493 480 aa11.87□□□□□ -0.51
TUBB3-213ENST00000557262 LPAR6P43657 344 aa11.87□□□□□ -0.51
TUBB3-213ENST00000557262 CADM3Q8N126 398 aa11.87□□□□□ -0.51
TUBB3-213ENST00000557262 GDPD1Q8N9F7 314 aa11.87□□□□□ -0.51
TUBB3-213ENST00000557262 OR1L6Q8NGR2 347 aa11.87□□□□□ -0.51
TUBB3-213ENST00000557262 MOB3AQ96BX8 217 aa11.87□□□□□ -0.51
TUBB3-213ENST00000557262 OVOL2Q9BRP0 275 aa11.87□□□□□ -0.51
TUBB3-213ENST00000557262 C5orf66Q9H5L9 145 aa11.87□□□□□ -0.51
TUBB3-213ENST00000557262 NDUFA4L2Q9NRX3 87 aa11.87□□□□□ -0.51
TUBB3-213ENST00000557262 MARCH11A6NNE9 402 aa11.86□□□□□ -0.51
TUBB3-213ENST00000557262 PMP2P02689 132 aa11.86□□□□□ -0.51
TUBB3-213ENST00000557262 NAT1P18440 290 aa11.86□□□□□ -0.51
TUBB3-213ENST00000557262 RPS19P39019 145 aaKnown RBP11.86□□□□□ -0.51
TUBB3-213ENST00000557262 WT1-ASQ06250 92 aa11.86□□□□□ -0.51
TUBB3-213ENST00000557262 KCTD21Q4G0X4 260 aa11.86□□□□□ -0.51
TUBB3-213ENST00000557262 UBE2NLQ5JXB2 153 aa11.86□□□□□ -0.51
TUBB3-213ENST00000557262 CMTM1Q8IZ96 169 aa11.86□□□□□ -0.51
TUBB3-213ENST00000557262 SLC38A6Q8IZM9 456 aa11.86□□□□□ -0.51
TUBB3-213ENST00000557262 OR2C3Q8N628 320 aa11.86□□□□□ -0.51
TUBB3-213ENST00000557262 OR6F1Q8NGZ6 308 aa11.86□□□□□ -0.51
TUBB3-213ENST00000557262 DGCR14Q96DF8 476 aaKnown RBP11.86□□□□□ -0.51
TUBB3-213ENST00000557262 ANAPC10Q9UM13 185 aa11.86□□□□□ -0.51
TUBB3-213ENST00000557262 SNAPC5O75971 98 aa11.85□□□□□ -0.51
TUBB3-213ENST00000557262 KRASP01116 189 aa11.85□□□□□ -0.51
TUBB3-213ENST00000557262 RLN1P04808 185 aa11.85□□□□□ -0.51
TUBB3-213ENST00000557262 TGFBR1P36897 503 aa11.85□□□□□ -0.51
TUBB3-213ENST00000557262 TAS2R46P59540 309 aa11.85□□□□□ -0.51
TUBB3-213ENST00000557262 TMEM69Q5SWH9 247 aa11.85□□□□□ -0.51
TUBB3-213ENST00000557262 SPSB3Q6PJ21 355 aa11.85□□□□□ -0.51
TUBB3-213ENST00000557262 SAMD12Q8N8I0 201 aa11.85□□□□□ -0.51
TUBB3-213ENST00000557262 OR5H2Q8NGV7 314 aa11.85□□□□□ -0.51
TUBB3-213ENST00000557262 FCAMRQ8WWV6 532 aa11.85□□□□□ -0.51
TUBB3-213ENST00000557262 TMEM190Q8WZ59 177 aa11.85□□□□□ -0.51
TUBB3-213ENST00000557262 LSM10Q969L4 123 aaKnown RBP11.85□□□□□ -0.51
TUBB3-213ENST00000557262 BSCL2Q96G97 398 aaPredicted RBP11.85□□□□□ -0.51
TUBB3-213ENST00000557262 ATP6V0BQ99437 205 aa11.85□□□□□ -0.51
TUBB3-213ENST00000557262 SPAG8Q99932 426 aaPredicted RBP11.85□□□□□ -0.51
TUBB3-213ENST00000557262 HINT2Q9BX68 163 aa11.85□□□□□ -0.51
TUBB3-213ENST00000557262 OR51B2Q9Y5P1 312 aa11.85□□□□□ -0.51
TUBB3-213ENST00000557262 F11RQ9Y624 299 aaKnown RBP11.85□□□□□ -0.51
TUBB3-213ENST00000557262 PLECQ15149 4684 aaKnown RBP11.85□□□□□ -0.51
TUBB3-213ENST00000557262 OR2T8A6NH00 312 aa11.84□□□□□ -0.51
TUBB3-213ENST00000557262 GPR31O00270 319 aa11.84□□□□□ -0.51
TUBB3-213ENST00000557262 TSPAN4O14817 238 aa11.84□□□□□ -0.51
TUBB3-213ENST00000557262 PRSS3P35030 304 aa11.84□□□□□ -0.51
TUBB3-213ENST00000557262 G6PCP35575 357 aa11.84□□□□□ -0.51
TUBB3-213ENST00000557262 MFAP2P55001 183 aa11.84□□□□□ -0.51
TUBB3-213ENST00000557262 TAS2R20P59543 309 aa11.84□□□□□ -0.51
TUBB3-213ENST00000557262 LAMTOR1Q6IAA8 161 aa11.84□□□□□ -0.51
TUBB3-213ENST00000557262 LYSMD2Q8IV50 215 aa11.84□□□□□ -0.51
TUBB3-213ENST00000557262 TSPAN14Q8NG11 270 aa11.84□□□□□ -0.51
TUBB3-213ENST00000557262 SCARB1Q8WTV0 552 aa11.84□□□□□ -0.51
TUBB3-213ENST00000557262 DAZ1Q9NQZ3 744 aaKnown RBP11.84□□□□□ -0.51
TUBB3-213ENST00000557262 FKBP11Q9NYL4 201 aa11.84□□□□□ -0.51
TUBB3-213ENST00000557262 C21orf62Q9NYP8 219 aa11.84□□□□□ -0.51
TUBB3-213ENST00000557262 NSG2Q9Y328 171 aa11.84□□□□□ -0.51
TUBB3-213ENST00000557262 IGHV3-21A0A0B4J1V1 117 aa11.83□□□□□ -0.52
TUBB3-213ENST00000557262 K7EMT4 169 aa11.83□□□□□ -0.52
TUBB3-213ENST00000557262 NDUFA4O00483 81 aa11.83□□□□□ -0.52
TUBB3-213ENST00000557262 TMEM56Q96MV1 263 aa11.83□□□□□ -0.52
TUBB3-213ENST00000557262 CHRDL1Q9BU40 450 aa11.83□□□□□ -0.52
TUBB3-213ENST00000557262 PRNDQ9UKY0 176 aa11.83□□□□□ -0.52
TUBB3-213ENST00000557262 APOC4P55056 127 aa11.82□□□□□ -0.52
TUBB3-213ENST00000557262 LSM3P62310 102 aaKnown RBP11.82□□□□□ -0.52
TUBB3-213ENST00000557262 LPCAT3Q6P1A2 487 aa11.82□□□□□ -0.52
TUBB3-213ENST00000557262 WFDC3Q8IUB2 231 aa11.82□□□□□ -0.52
TUBB3-213ENST00000557262 OR5B3Q8NH48 314 aa11.82□□□□□ -0.52
TUBB3-213ENST00000557262 YIPF6Q96EC8 236 aa11.82□□□□□ -0.52
TUBB3-213ENST00000557262 TSC22D3Q99576 134 aa11.82□□□□□ -0.52
TUBB3-213ENST00000557262 C20orf24Q9BUV8 137 aa11.82□□□□□ -0.52
TUBB3-213ENST00000557262 TP53TG1Q9Y2A0 90 aa11.82□□□□□ -0.52
TUBB3-213ENST00000557262 F8W735 103 aaPredicted RBP11.81□□□□□ -0.52
TUBB3-213ENST00000557262 K7EIM0 57 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms