RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 CEACAM21Q3KPI0 293 aa3.85□□□□□ -1.79
ATXN3-246ENST00000557030 ACTL10Q5JWF8 245 aa3.85□□□□□ -1.79
ATXN3-246ENST00000557030 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
ATXN3-246ENST00000557030 PRAMEF20Q5VT98 475 aa3.85□□□□□ -1.79
ATXN3-246ENST00000557030 ZNF880Q6PDB4 577 aa3.85□□□□□ -1.79
ATXN3-246ENST00000557030 FIP1L1Q6UN15 594 aaKnown RBP3.85□□□□□ -1.79
ATXN3-246ENST00000557030 LINC00696Q6ZRV3 163 aa3.85□□□□□ -1.79
ATXN3-246ENST00000557030 MRPL21Q7Z2W9 205 aaKnown RBP3.85□□□□□ -1.79
ATXN3-246ENST00000557030 ZNF573Q86YE8 665 aa3.85□□□□□ -1.79
ATXN3-246ENST00000557030 TCTEX1D1Q8N7M0 179 aa3.85□□□□□ -1.79
ATXN3-246ENST00000557030 OR10V1Q8NGI7 309 aa3.85□□□□□ -1.79
ATXN3-246ENST00000557030 OR5A2Q8NGI9 324 aa3.85□□□□□ -1.79
ATXN3-246ENST00000557030 PSMF1Q92530 271 aa3.85□□□□□ -1.79
ATXN3-246ENST00000557030 NAT6Q93015 286 aa3.85□□□□□ -1.79
ATXN3-246ENST00000557030 TMEM45BQ96B21 275 aa3.85□□□□□ -1.79
ATXN3-246ENST00000557030 IMMP1LQ96LU5 166 aa3.85□□□□□ -1.79
ATXN3-246ENST00000557030 CIB3Q96Q77 187 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-246ENST00000557030 TMEM147Q9BVK8 224 aa3.85□□□□□ -1.79
ATXN3-246ENST00000557030 MRPL37Q9BZE1 423 aaKnown RBP3.85□□□□□ -1.79
ATXN3-246ENST00000557030 PKIBQ9C010 78 aa3.85□□□□□ -1.79
ATXN3-246ENST00000557030 WDR61Q9GZS3 305 aaKnown RBP3.85□□□□□ -1.79
ATXN3-246ENST00000557030 PROK2Q9HC23 129 aa3.85□□□□□ -1.79
ATXN3-246ENST00000557030 TMEM9BQ9NQ34 198 aa3.85□□□□□ -1.79
ATXN3-246ENST00000557030 CCL28Q9NRJ3 127 aa3.85□□□□□ -1.79
ATXN3-246ENST00000557030 MRPS18CQ9Y3D5 142 aaKnown RBP3.85□□□□□ -1.79
ATXN3-246ENST00000557030 RFNGQ9Y644 331 aa3.85□□□□□ -1.79
ATXN3-246ENST00000557030 ALPK2Q86TB3 2170 aa3.85□□□□□ -1.79
ATXN3-246ENST00000557030 IGHV1-45A0A0A0MS14 117 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 IGHV3-15A0A0B4J1V0 119 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 KIR2DL5BA0A0G2JN68 375 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 KIR2DL5BA0A0G2JPC4 375 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 A0A1B0GWJ7 208 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 A0A1W2PPQ1 181 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 OR5B21A6NL26 309 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 ZNF716A6NP11 495 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 F6UZH7 168 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 CIDEAO60543 219 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 CYTIPO60759 359 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 KLF7O75840 302 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-246ENST00000557030 SYNGR4O95473 234 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 P04436 131 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 SCTP09683 121 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 IAPPP10997 89 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 PSG2P11465 335 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 COX6A1P12074 109 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 CCL4P13236 92 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 B4GALT1P15291 398 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 COX5AP20674 150 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 BCL3P20749 454 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 TUBG1P23258 451 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 OR10J1P30954 320 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 CNN1P51911 297 aaKnown RBP3.84□□□□□ -1.79
ATXN3-246ENST00000557030 CRIP2P52943 208 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-246ENST00000557030 UBE2NP61088 152 aaKnown RBP3.84□□□□□ -1.79
ATXN3-246ENST00000557030 PPP1CBP62140 327 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 PAFAH1B2P68402 229 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 RPL19P84098 196 aaKnown RBP3.84□□□□□ -1.79
ATXN3-246ENST00000557030 PAX5Q02548 391 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 HERPUD1Q15011 391 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 CEACAM16Q2WEN9 425 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 C1orf194Q5T5A4 169 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 RPS19BP1Q86WX3 136 aaKnown RBP3.84□□□□□ -1.79
ATXN3-246ENST00000557030 CALHM1Q8IU99 346 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 TGIF2LXQ8IUE1 241 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 Q8IYB0 196 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 KIR2DL5AQ8N109 375 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 ZNF664Q8N3J9 261 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 ZNF709Q8N972 641 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 OR56B2PQ8NGI1 322 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 MRPL30Q8TCC3 161 aaKnown RBP3.84□□□□□ -1.79
ATXN3-246ENST00000557030 APOBEC3DQ96AK3 386 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-246ENST00000557030 RPUSD4Q96CM3 377 aaKnown RBP3.84□□□□□ -1.79
ATXN3-246ENST00000557030 GMPPAQ96IJ6 420 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-246ENST00000557030 MS4A10Q96PG2 267 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 OR4C12Q96R67 309 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 RSG1Q9BU20 258 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 SRXN1Q9BYN0 137 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 LINC00470Q9BZP3 86 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 PARLQ9H300 379 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 RBKSQ9H477 322 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 SH2D2AQ9NP31 389 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 DCAF16Q9NXF7 216 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 ZNF581Q9P0T4 197 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 CACNG5Q9UF02 275 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 TCF19Q9Y242 345 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 MPC1Q9Y5U8 109 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 R4GN57 208 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 FRYQ5TBA9 3013 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 CACNA1EQ15878 2313 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 OTOGLQ3ZCN5 2332 aa3.84□□□□□ -1.79
ATXN3-246ENST00000557030 ZZEF1O43149 2961 aa3.84□□□□□ -1.8
ATXN3-246ENST00000557030 COL27A1Q8IZC6 1860 aaPredicted RBP3.84□□□□□ -1.8
ATXN3-246ENST00000557030 CABIN1Q9Y6J0 2220 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 USP9XQ93008 2570 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-246ENST00000557030 IGKV1-6A0A0C4DH72 117 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 A0A0G2JRQ6 117 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 UBE2L5PA0A1B0GUS4 154 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 TMEM210A6NLX4 147 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 ANKRD30BLA7E2S9 258 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 PMS2P5A8MQ11 134 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms