RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 TMUB2Q71RG4 321 aa18.93■□□□□ 0.62
SIX4-203ENST00000556952 ARL6Q9H0F7 186 aa18.93■□□□□ 0.62
SIX4-203ENST00000556952 ACTL6BO94805 426 aa18.93■□□□□ 0.62
SIX4-203ENST00000556952 HOXA1P49639 335 aaPredicted RBP18.93■□□□□ 0.62
SIX4-203ENST00000556952 C5orf64Q2M2E5 130 aa18.93■□□□□ 0.62
SIX4-203ENST00000556952 SPINK9Q5DT21 86 aa18.93■□□□□ 0.62
SIX4-203ENST00000556952 SSX3Q99909 188 aa18.93■□□□□ 0.62
SIX4-203ENST00000556952 HIPK2Q9H2X6 1198 aa18.93■□□□□ 0.62
SIX4-203ENST00000556952 PLEKHA3Q9HB20 300 aa18.93■□□□□ 0.62
SIX4-203ENST00000556952 ENY2Q9NPA8 101 aa18.93■□□□□ 0.62
SIX4-203ENST00000556952 ZC4H2Q9NQZ6 224 aa18.93■□□□□ 0.62
SIX4-203ENST00000556952 BOLA1Q9Y3E2 137 aa18.93■□□□□ 0.62
SIX4-203ENST00000556952 JMJD1CQ15652 2540 aa18.93■□□□□ 0.62
SIX4-203ENST00000556952 HNF1AP20823 631 aa18.92■□□□□ 0.62
SIX4-203ENST00000556952 TMEM252Q8N6L7 170 aa18.92■□□□□ 0.62
SIX4-203ENST00000556952 NDUFA4L2Q9NRX3 87 aa18.92■□□□□ 0.62
SIX4-203ENST00000556952 TNCP24821 2201 aa18.92■□□□□ 0.62
SIX4-203ENST00000556952 FAM24AA6NFZ4 105 aa18.91■□□□□ 0.62
SIX4-203ENST00000556952 MYOD1P15172 320 aa18.91■□□□□ 0.62
SIX4-203ENST00000556952 VDAC2P45880 294 aaPredicted RBP18.91■□□□□ 0.62
SIX4-203ENST00000556952 BAXQ07812 192 aa18.91■□□□□ 0.62
SIX4-203ENST00000556952 PJVKQ0ZLH3 352 aa18.91■□□□□ 0.62
SIX4-203ENST00000556952 PIFOQ8TCI5 191 aa18.91■□□□□ 0.62
SIX4-203ENST00000556952 SOX21Q9Y651 276 aaPredicted RBP18.91■□□□□ 0.62
SIX4-203ENST00000556952 A0A1W2PN81 502 aa18.9■□□□□ 0.62
SIX4-203ENST00000556952 NCBP2LA6PVI3 153 aaKnown RBP18.9■□□□□ 0.62
SIX4-203ENST00000556952 H3BP45 60 aa18.9■□□□□ 0.62
SIX4-203ENST00000556952 CHRNA7P36544 502 aa18.9■□□□□ 0.62
SIX4-203ENST00000556952 COMPP49747 757 aaPredicted RBP18.9■□□□□ 0.62
SIX4-203ENST00000556952 RPP30P78346 268 aaKnown RBP18.9■□□□□ 0.62
SIX4-203ENST00000556952 EWSR1Q01844 656 aaKnown RBP eCLIP18.9■□□□□ 0.62
SIX4-203ENST00000556952 OPCMLQ14982 345 aa18.9■□□□□ 0.62
SIX4-203ENST00000556952 TNXAQ16473 311 aa18.9■□□□□ 0.62
SIX4-203ENST00000556952 STX12Q86Y82 276 aa18.9■□□□□ 0.62
SIX4-203ENST00000556952 HEYLQ9NQ87 328 aaPredicted RBP18.9■□□□□ 0.62
SIX4-203ENST00000556952 KANTRA0A1W2PQU2 76 aa18.89■□□□□ 0.62
SIX4-203ENST00000556952 IGSF23A1L1A6 192 aa18.89■□□□□ 0.62
SIX4-203ENST00000556952 INS-IGF2F8WCM5 200 aa18.89■□□□□ 0.62
SIX4-203ENST00000556952 BCL2L11O43521 198 aa18.89■□□□□ 0.62
SIX4-203ENST00000556952 SPANXN5Q5MJ07 72 aa18.89■□□□□ 0.62
SIX4-203ENST00000556952 HINT2Q9BX68 163 aa18.89■□□□□ 0.62
SIX4-203ENST00000556952 SCAF4O95104 1147 aaKnown RBP18.89■□□□□ 0.61
SIX4-203ENST00000556952 CA2P00918 260 aa18.89■□□□□ 0.61
SIX4-203ENST00000556952 OPN1MWP04001 364 aa18.89■□□□□ 0.61
SIX4-203ENST00000556952 OPN1MW2P0DN77 364 aa18.89■□□□□ 0.61
SIX4-203ENST00000556952 OPN1MW3P0DN78 364 aa18.89■□□□□ 0.61
SIX4-203ENST00000556952 RPL27AP46776 148 aaKnown RBP18.89■□□□□ 0.61
SIX4-203ENST00000556952 DEFB112Q30KQ8 113 aa18.89■□□□□ 0.61
SIX4-203ENST00000556952 Q8N9W7 124 aa18.89■□□□□ 0.61
SIX4-203ENST00000556952 RBM14Q96PK6 669 aaKnown RBP18.89■□□□□ 0.61
SIX4-203ENST00000556952 ARPC5LQ9BPX5 153 aa18.89■□□□□ 0.61
SIX4-203ENST00000556952 PITPNC1Q9UKF7 332 aa18.89■□□□□ 0.61
SIX4-203ENST00000556952 STRAPQ9Y3F4 350 aaKnown RBP18.89■□□□□ 0.61
SIX4-203ENST00000556952 H3BUX3 64 aa18.88■□□□□ 0.61
SIX4-203ENST00000556952 TAAR5O14804 337 aa18.88■□□□□ 0.61
SIX4-203ENST00000556952 SRD5A1P18405 259 aa18.88■□□□□ 0.61
SIX4-203ENST00000556952 SRP14P37108 136 aaKnown RBP18.88■□□□□ 0.61
SIX4-203ENST00000556952 SULT1A1P50225 295 aa18.88■□□□□ 0.61
SIX4-203ENST00000556952 C10orf55Q5SWW7 151 aa18.88■□□□□ 0.61
SIX4-203ENST00000556952 TMEM14EPQ6UXP3 125 aa18.88■□□□□ 0.61
SIX4-203ENST00000556952 MRPL41Q8IXM3 137 aaKnown RBP18.88■□□□□ 0.61
SIX4-203ENST00000556952 BCL6BQ8N143 479 aaPredicted RBP18.88■□□□□ 0.61
SIX4-203ENST00000556952 U3KQ87 197 aa18.88■□□□□ 0.61
SIX4-203ENST00000556952 CGB1A6NKQ9 187 aa18.87■□□□□ 0.61
SIX4-203ENST00000556952 FAM157CP0CG43 387 aa18.87■□□□□ 0.61
SIX4-203ENST00000556952 GNB1P62873 340 aa18.87■□□□□ 0.61
SIX4-203ENST00000556952 SLC25A33Q9BSK2 321 aa18.87■□□□□ 0.61
SIX4-203ENST00000556952 MOB4Q9Y3A3 225 aa18.87■□□□□ 0.61
SIX4-203ENST00000556952 FCN1O00602 326 aa18.86■□□□□ 0.61
SIX4-203ENST00000556952 FGF16O43320 207 aa18.86■□□□□ 0.61
SIX4-203ENST00000556952 SSBP2P81877 361 aaPredicted RBP18.86■□□□□ 0.61
SIX4-203ENST00000556952 STPG2Q8N412 459 aa18.86■□□□□ 0.61
SIX4-203ENST00000556952 OR4C12Q96R67 309 aa18.86■□□□□ 0.61
SIX4-203ENST00000556952 RASL11BQ9BPW5 248 aa18.86■□□□□ 0.61
SIX4-203ENST00000556952 SRSF8Q9BRL6 282 aaKnown RBP18.86■□□□□ 0.61
SIX4-203ENST00000556952 GON7Q9BXV9 100 aa18.86■□□□□ 0.61
SIX4-203ENST00000556952 FBXL17Q9UF56 701 aa18.86■□□□□ 0.61
SIX4-203ENST00000556952 MDFIC2A0A1B0GVS7 189 aa18.85■□□□□ 0.61
SIX4-203ENST00000556952 A6NDX4 124 aa18.85■□□□□ 0.61
SIX4-203ENST00000556952 E7EUB6 86 aa18.85■□□□□ 0.61
SIX4-203ENST00000556952 HLA-DRB1P01911 266 aa18.85■□□□□ 0.61
SIX4-203ENST00000556952 ATP5IP56385 69 aaPredicted RBP18.85■□□□□ 0.61
SIX4-203ENST00000556952 NHLH2Q02577 135 aa18.85■□□□□ 0.61
SIX4-203ENST00000556952 TMEM267Q0VDI3 215 aaPredicted RBP18.85■□□□□ 0.61
SIX4-203ENST00000556952 C16orf82Q7Z2V1 217 aa18.85■□□□□ 0.61
SIX4-203ENST00000556952 HSD17B13Q7Z5P4 300 aaPredicted RBP18.85■□□□□ 0.61
SIX4-203ENST00000556952 SLC24A4Q8NFF2 622 aa18.85■□□□□ 0.61
SIX4-203ENST00000556952 SRSF12Q8WXF0 261 aaKnown RBP18.85■□□□□ 0.61
SIX4-203ENST00000556952 C22orf15Q8WYQ4 148 aa18.85■□□□□ 0.61
SIX4-203ENST00000556952 CST7O76096 145 aa18.85■□□□□ 0.61
SIX4-203ENST00000556952 CNIH1O95406 144 aa18.85■□□□□ 0.61
SIX4-203ENST00000556952 IFNA10P01566 189 aa18.85■□□□□ 0.61
SIX4-203ENST00000556952 METTL15P1P0C7V9 234 aa18.85■□□□□ 0.61
SIX4-203ENST00000556952 HTR2BP41595 481 aa18.85■□□□□ 0.61
SIX4-203ENST00000556952 ERHP84090 104 aaKnown RBP18.85■□□□□ 0.61
SIX4-203ENST00000556952 ZNF562Q6V9R5 426 aa18.85■□□□□ 0.61
SIX4-203ENST00000556952 OR5R1Q8NH85 324 aa18.85■□□□□ 0.61
SIX4-203ENST00000556952 PRDM13Q9H4Q3 707 aa18.85■□□□□ 0.61
SIX4-203ENST00000556952 A0A1B0GW64 132 aa18.84■□□□□ 0.61
SIX4-203ENST00000556952 C15orf62A8K5M9 175 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms