RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 ZNF430Q9H8G1 570 aaPredicted RBP7.95□□□□□ -1.14
SHMT2-224ENST00000556737 TNCP24821 2201 aa7.95□□□□□ -1.14
SHMT2-224ENST00000556737 DNAH7Q8WXX0 4024 aa7.95□□□□□ -1.14
SHMT2-224ENST00000556737 C9orf170A2RU37 121 aa7.94□□□□□ -1.14
SHMT2-224ENST00000556737 SNRPGP15A8MWD9 76 aa7.94□□□□□ -1.14
SHMT2-224ENST00000556737 RAMP3O60896 148 aa7.94□□□□□ -1.14
SHMT2-224ENST00000556737 SFT2D2O95562 160 aa7.94□□□□□ -1.14
SHMT2-224ENST00000556737 APELAP0DMC3 54 aa7.94□□□□□ -1.14
SHMT2-224ENST00000556737 CATR1Q13166 79 aa7.94□□□□□ -1.14
SHMT2-224ENST00000556737 DHRS2Q13268 280 aa7.94□□□□□ -1.14
SHMT2-224ENST00000556737 ZNF66Q6ZN08 573 aa7.94□□□□□ -1.14
SHMT2-224ENST00000556737 VKORC1L1Q8N0U8 176 aa7.94□□□□□ -1.14
SHMT2-224ENST00000556737 PUSL1Q8N0Z8 303 aaKnown RBP7.94□□□□□ -1.14
SHMT2-224ENST00000556737 C12orf45Q8N5I9 185 aaPredicted RBP7.94□□□□□ -1.14
SHMT2-224ENST00000556737 OR4S2Q8NH73 311 aa7.94□□□□□ -1.14
SHMT2-224ENST00000556737 COQ8AQ8NI60 647 aa7.94□□□□□ -1.14
SHMT2-224ENST00000556737 TMEM68Q96MH6 324 aa7.94□□□□□ -1.14
SHMT2-224ENST00000556737 PHB2Q99623 299 aa7.94□□□□□ -1.14
SHMT2-224ENST00000556737 PRR13Q9NZ81 148 aa7.94□□□□□ -1.14
SHMT2-224ENST00000556737 PRELID3BQ9Y3B1 194 aa7.94□□□□□ -1.14
SHMT2-224ENST00000556737 LSM4Q9Y4Z0 139 aaKnown RBP7.94□□□□□ -1.14
SHMT2-224ENST00000556737 KMT2CQ8NEZ4 4911 aaKnown RBP7.94□□□□□ -1.14
SHMT2-224ENST00000556737 C3orf85A0A1B0GTC6 90 aa7.93□□□□□ -1.14
SHMT2-224ENST00000556737 A0A1B0GW64 132 aa7.93□□□□□ -1.14
SHMT2-224ENST00000556737 C7orf66A4D0T2 115 aa7.93□□□□□ -1.14
SHMT2-224ENST00000556737 MSGN1A6NI15 193 aa7.93□□□□□ -1.14
SHMT2-224ENST00000556737 CRYM-AS1A6NIL9 109 aa7.93□□□□□ -1.14
SHMT2-224ENST00000556737 FAM25EA8MYX2 175 aa7.93□□□□□ -1.14
SHMT2-224ENST00000556737 TEX22C9J3V5 150 aa7.93□□□□□ -1.14
SHMT2-224ENST00000556737 GOSR2O14653 212 aa7.93□□□□□ -1.14
SHMT2-224ENST00000556737 MPPED1O15442 326 aa7.93□□□□□ -1.14
SHMT2-224ENST00000556737 KBTBD11O94819 623 aa7.93□□□□□ -1.14
SHMT2-224ENST00000556737 HSPB1P04792 205 aaKnown RBP7.93□□□□□ -1.14
SHMT2-224ENST00000556737 OR5AC1P0C628 307 aa7.93□□□□□ -1.14
SHMT2-224ENST00000556737 INSL3P51460 131 aa7.93□□□□□ -1.14
SHMT2-224ENST00000556737 MECP2P51608 486 aaKnown RBP7.93□□□□□ -1.14
SHMT2-224ENST00000556737 RND3P61587 244 aa7.93□□□□□ -1.14
SHMT2-224ENST00000556737 SP6Q3SY56 376 aa7.93□□□□□ -1.14
SHMT2-224ENST00000556737 C11orf87Q6NUJ2 197 aa7.93□□□□□ -1.14
SHMT2-224ENST00000556737 CADM3Q8N126 398 aa7.93□□□□□ -1.14
SHMT2-224ENST00000556737 ZBTB34Q8NCN2 500 aa7.93□□□□□ -1.14
SHMT2-224ENST00000556737 RNASE11Q8TAA1 199 aaKnown RBP7.93□□□□□ -1.14
SHMT2-224ENST00000556737 TMEM167AQ8TBQ9 72 aa7.93□□□□□ -1.14
SHMT2-224ENST00000556737 B9D2Q9BPU9 175 aa7.93□□□□□ -1.14
SHMT2-224ENST00000556737 MGAT4CQ9UBM8 478 aa7.93□□□□□ -1.14
SHMT2-224ENST00000556737 ZMAT5Q9UDW3 170 aaKnown RBP7.93□□□□□ -1.14
SHMT2-224ENST00000556737 ZNF256Q9Y2P7 627 aaPredicted RBP7.93□□□□□ -1.14
SHMT2-224ENST00000556737 E7EUB6 86 aa7.92□□□□□ -1.14
SHMT2-224ENST00000556737 SAP30O75446 220 aa7.92□□□□□ -1.14
SHMT2-224ENST00000556737 PGLYRP1O75594 196 aaPredicted RBP7.92□□□□□ -1.14
SHMT2-224ENST00000556737 TRBV12-3P01733 135 aa7.92□□□□□ -1.14
SHMT2-224ENST00000556737 SERPINE2P07093 398 aa7.92□□□□□ -1.14
SHMT2-224ENST00000556737 OR9G9P0C7N8 305 aa7.92□□□□□ -1.14
SHMT2-224ENST00000556737 KIR2DS2P43631 304 aa7.92□□□□□ -1.14
SHMT2-224ENST00000556737 RRAS2P62070 204 aaPredicted RBP7.92□□□□□ -1.14
SHMT2-224ENST00000556737 DEFB121Q5J5C9 76 aa7.92□□□□□ -1.14
SHMT2-224ENST00000556737 ZNF343Q6P1L6 599 aa7.92□□□□□ -1.14
SHMT2-224ENST00000556737 ACSM6Q6P461 480 aa7.92□□□□□ -1.14
SHMT2-224ENST00000556737 C19orf35Q6ZS72 473 aa7.92□□□□□ -1.14
SHMT2-224ENST00000556737 AKAP14Q86UN6 197 aa7.92□□□□□ -1.14
SHMT2-224ENST00000556737 ZNF429Q86V71 674 aa7.92□□□□□ -1.14
SHMT2-224ENST00000556737 MMD2Q8IY49 270 aa7.92□□□□□ -1.14
SHMT2-224ENST00000556737 ZNF355PQ9NSJ1 428 aa7.92□□□□□ -1.14
SHMT2-224ENST00000556737 COA4Q9NYJ1 87 aa7.92□□□□□ -1.14
SHMT2-224ENST00000556737 TRBV9A0A0B4J1U6 114 aa7.91□□□□□ -1.14
SHMT2-224ENST00000556737 A0A0G2JLM5 398 aa7.91□□□□□ -1.14
SHMT2-224ENST00000556737 C13orf42A0A1B0GVH6 325 aa7.91□□□□□ -1.14
SHMT2-224ENST00000556737 HMX3A6NHT5 357 aa7.91□□□□□ -1.14
SHMT2-224ENST00000556737 CGB1A6NKQ9 187 aa7.91□□□□□ -1.14
SHMT2-224ENST00000556737 H0Y980 276 aa7.91□□□□□ -1.14
SHMT2-224ENST00000556737 CCSO14618 274 aa7.91□□□□□ -1.14
SHMT2-224ENST00000556737 RBFOX2O43251 390 aaKnown RBP eCLIP7.91□□□□□ -1.145e-15■■■■■ 33.3
SHMT2-224ENST00000556737 CCNKO75909 580 aa7.91□□□□□ -1.14
SHMT2-224ENST00000556737 OR2A4O95047 310 aa7.91□□□□□ -1.14
SHMT2-224ENST00000556737 PRH1P02810 166 aa7.91□□□□□ -1.14
SHMT2-224ENST00000556737 IL6RP08887 468 aaPredicted RBP7.91□□□□□ -1.14
SHMT2-224ENST00000556737 HOXB5P09067 269 aa7.91□□□□□ -1.14
SHMT2-224ENST00000556737 F2RP25116 425 aa7.91□□□□□ -1.14
SHMT2-224ENST00000556737 SUPT4H1P63272 117 aaKnown RBP7.91□□□□□ -1.14
SHMT2-224ENST00000556737 SRPXP78539 464 aa7.91□□□□□ -1.14
SHMT2-224ENST00000556737 DHODHQ02127 395 aa7.91□□□□□ -1.14
SHMT2-224ENST00000556737 FCN2Q15485 313 aa7.91□□□□□ -1.14
SHMT2-224ENST00000556737 ANKRD55Q3KP44 614 aa7.91□□□□□ -1.14
SHMT2-224ENST00000556737 LGI3Q8N145 548 aa7.91□□□□□ -1.14
SHMT2-224ENST00000556737 TTC9CQ8N5M4 171 aa7.91□□□□□ -1.14
SHMT2-224ENST00000556737 OR2A7Q96R45 310 aa7.91□□□□□ -1.14
SHMT2-224ENST00000556737 TP53RKQ96S44 253 aa7.91□□□□□ -1.14
SHMT2-224ENST00000556737 PDCD10Q9BUL8 212 aa7.91□□□□□ -1.14
SHMT2-224ENST00000556737 ANKRD34BA5PLL1 514 aa7.9□□□□□ -1.14
SHMT2-224ENST00000556737 C5orf51A6NDU8 294 aa7.9□□□□□ -1.14
SHMT2-224ENST00000556737 FAM223BA6NKX1 122 aa7.9□□□□□ -1.14
SHMT2-224ENST00000556737 SIX6O95475 246 aa7.9□□□□□ -1.14
SHMT2-224ENST00000556737 IFNA21P01568 189 aa7.9□□□□□ -1.14
SHMT2-224ENST00000556737 MYOD1P15172 320 aa7.9□□□□□ -1.14
SHMT2-224ENST00000556737 RPL27AP46776 148 aaKnown RBP7.9□□□□□ -1.14
SHMT2-224ENST00000556737 AKR1C2P52895 323 aa7.9□□□□□ -1.14
SHMT2-224ENST00000556737 RHOGP84095 191 aa7.9□□□□□ -1.14
SHMT2-224ENST00000556737 CD69Q07108 199 aa7.9□□□□□ -1.14
SHMT2-224ENST00000556737 KLF5Q13887 457 aaPredicted RBP7.9□□□□□ -1.14
SHMT2-224ENST00000556737 POU2AF1Q16633 256 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms