RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 TRDCB7Z8K6 153 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 NPIPB11E5RHQ5 1161 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 SDCBPO00560 298 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-240ENST00000556339 DVL1O14640 695 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 MLNRO43193 412 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 NDUFB3O43676 98 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 SOX15O60248 233 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 PITX3O75364 302 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 TK1P04183 234 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 HSPB1P04792 205 aaKnown RBP3.19□□□□□ -1.9
ATXN3-240ENST00000556339 PPIAL4GP0DN37 164 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 SERPINA2P20848 420 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 VDAC1P21796 283 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 CFHR2P36980 270 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 CD200P41217 278 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 NKX2-1P43699 371 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-240ENST00000556339 GABRA2P47869 451 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 CAMLGP49069 296 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 TAS2R30P59541 319 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 PNRC1Q12796 327 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-240ENST00000556339 IL24Q13007 206 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 MSMO1Q15800 293 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 RSPO1Q2MKA7 263 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-240ENST00000556339 KHDC3LQ587J8 217 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 SOHLH1Q5JUK2 328 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 TMEM88Q6PEY1 159 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 ZNF826PQ6ZT77 177 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 SLC35E3Q7Z769 313 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 MKXQ8IYA7 352 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 CMTM1Q8IZ96 169 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 OR2C3Q8N628 320 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 OR4D5Q8NGN0 318 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 OR2AE1Q8NHA4 323 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 FAM110DQ8TAY7 271 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-240ENST00000556339 SSMEM1Q8WWF3 244 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 H1FXQ92522 213 aaKnown RBP3.19□□□□□ -1.9
ATXN3-240ENST00000556339 HIST1H2BAQ96A08 127 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 REEP6Q96HR9 211 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 AKR1E2Q96JD6 320 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 BTF3L4Q96K17 158 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 P2RX4Q99571 388 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 CCL13Q99616 98 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 ADAT1Q9BUB4 502 aaKnown RBP3.19□□□□□ -1.9
ATXN3-240ENST00000556339 SCRT1Q9BWW7 348 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 TMEM222Q9H0R3 208 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 OR51M1Q9H341 326 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 C11orf1Q9H5F2 150 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 SEBOXQ9HB31 216 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-240ENST00000556339 ELL3Q9HB65 397 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-240ENST00000556339 RPS10P5Q9NQ39 176 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 SLC2A9Q9NRM0 540 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 LYRM2Q9NU23 88 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-240ENST00000556339 AK3Q9UIJ7 227 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 NOTCH1P46531 2555 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 ANK2Q01484 3957 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 IGHV1-69DA0A0B4J2H0 117 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 CENPVL3A0A0U1RRI6 287 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 C3orf85A0A1B0GTC6 90 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 A0A1B0GU03 582 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 hCG_38984A0A1B0GV85 526 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 CLPSL1A2RUU4 121 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 RBFOX3A6NFN3 312 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 OOEPA6NGQ2 149 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 FAM90A26D6RGX4 464 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 H0Y980 276 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 CLDN34H7C241 214 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 K7N7A8 449 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 WRBO00258 174 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 BUB3O43684 328 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 GATCO43716 136 aaKnown RBP3.18□□□□□ -1.9
ATXN3-240ENST00000556339 PPYP01298 95 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 IGHV1-69P01742 117 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 PRH1P02810 166 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 OR5AC1P0C628 307 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 OR8U9P0C7N5 309 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 ZNF44P15621 663 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 RAB5AP20339 215 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 GABRR1P24046 479 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 NPBWR2P48146 333 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 AKR1D1P51857 326 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 RBM11P57052 281 aaKnown RBP3.18□□□□□ -1.9
ATXN3-240ENST00000556339 RPL23AP62750 156 aaKnown RBP3.18□□□□□ -1.9
ATXN3-240ENST00000556339 VAMP2P63027 116 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 SERF2P84101 59 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 EWSR1Q01844 656 aaKnown RBP eCLIP3.18□□□□□ -1.9
ATXN3-240ENST00000556339 ZNF92Q03936 586 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 TAF9Q16594 264 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 CEACAM21Q3KPI0 293 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 PDLIM3Q53GG5 364 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-240ENST00000556339 LRRC10Q5BKY1 277 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 ZNF506Q5JVG8 444 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 C9orf139Q6ZV77 190 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 MOB1BQ7L9L4 216 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 C6orf201Q7Z4U5 140 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 CBLN2Q8IUK8 224 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 ZNF695Q8IW36 515 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 Q8IYB0 196 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 H1FOOQ8IZA3 346 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-240ENST00000556339 TCTEX1D1Q8N7M0 179 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 ZNF565Q8N9K5 539 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms