RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 CCDC140Q96MF4 163 aa15.65■□□□□ 0.1
VTI1B-205ENST00000555543 B9D2Q9BPU9 175 aa15.65■□□□□ 0.1
VTI1B-205ENST00000555543 PPP5D1E7EU14 171 aa15.64■□□□□ 0.09
VTI1B-205ENST00000555543 DHFRP00374 187 aa15.64■□□□□ 0.09
VTI1B-205ENST00000555543 IGLV1-51P01701 117 aa15.64■□□□□ 0.09
VTI1B-205ENST00000555543 SSBP1Q04837 148 aaKnown RBP15.64■□□□□ 0.09
VTI1B-205ENST00000555543 WT1-ASQ06250 92 aa15.64■□□□□ 0.09
VTI1B-205ENST00000555543 SCGB2B2Q4G0G5 96 aa15.64■□□□□ 0.09
VTI1B-205ENST00000555543 OR6Q1Q8NGQ2 317 aa15.64■□□□□ 0.09
VTI1B-205ENST00000555543 SEC22AQ96IW7 307 aa15.64■□□□□ 0.09
VTI1B-205ENST00000555543 SRSF8Q9BRL6 282 aaKnown RBP15.64■□□□□ 0.09
VTI1B-205ENST00000555543 NXF2Q9GZY0 626 aaKnown RBP15.64■□□□□ 0.09
VTI1B-205ENST00000555543 NDUFA4L2Q9NRX3 87 aa15.64■□□□□ 0.09
VTI1B-205ENST00000555543 MFSD2BA6NFX1 497 aa15.63■□□□□ 0.09
VTI1B-205ENST00000555543 CTDSPLO15194 276 aa15.63■□□□□ 0.09
VTI1B-205ENST00000555543 HLA-AP01891 365 aaKnown RBP15.63■□□□□ 0.09
VTI1B-205ENST00000555543 TRAPPC2P0DI81 140 aa15.63■□□□□ 0.09
VTI1B-205ENST00000555543 TRAPPC2BP0DI82 140 aa15.63■□□□□ 0.09
VTI1B-205ENST00000555543 DEFA4P12838 97 aa15.63■□□□□ 0.09
VTI1B-205ENST00000555543 PTBP1P26599 531 aaKnown RBP eCLIP15.63■□□□□ 0.09
VTI1B-205ENST00000555543 PIGPP57054 158 aa15.63■□□□□ 0.09
VTI1B-205ENST00000555543 CD69Q07108 199 aa15.63■□□□□ 0.09
VTI1B-205ENST00000555543 DCTN2Q13561 401 aaKnown RBP15.63■□□□□ 0.09
VTI1B-205ENST00000555543 OR1L8Q8NGR8 309 aa15.63■□□□□ 0.09
VTI1B-205ENST00000555543 OR13C8Q8NGS7 320 aa15.63■□□□□ 0.09
VTI1B-205ENST00000555543 TERB2Q8NHR7 220 aa15.63■□□□□ 0.09
VTI1B-205ENST00000555543 MCFD2Q8NI22 146 aa15.63■□□□□ 0.09
VTI1B-205ENST00000555543 ZNF486Q96H40 463 aaPredicted RBP15.63■□□□□ 0.09
VTI1B-205ENST00000555543 OR51B2Q9Y5P1 312 aa15.63■□□□□ 0.09
VTI1B-205ENST00000555543 CSN3P07498 182 aa15.62■□□□□ 0.09
VTI1B-205ENST00000555543 GP9P14770 177 aa15.62■□□□□ 0.09
VTI1B-205ENST00000555543 HIST1H1BP16401 226 aaKnown RBP15.62■□□□□ 0.09
VTI1B-205ENST00000555543 TNFSF8P32971 234 aa15.62■□□□□ 0.09
VTI1B-205ENST00000555543 THOC7Q6I9Y2 204 aaKnown RBP15.62■□□□□ 0.09
VTI1B-205ENST00000555543 C11orf87Q6NUJ2 197 aa15.62■□□□□ 0.09
VTI1B-205ENST00000555543 MARCH1Q8TCQ1 289 aa15.62■□□□□ 0.09
VTI1B-205ENST00000555543 TP53RKQ96S44 253 aa15.62■□□□□ 0.09
VTI1B-205ENST00000555543 SOSTQ9BQB4 213 aa15.62■□□□□ 0.09
VTI1B-205ENST00000555543 HINT2Q9BX68 163 aa15.62■□□□□ 0.09
VTI1B-205ENST00000555543 TMEM14BQ9NUH8 114 aa15.62■□□□□ 0.09
VTI1B-205ENST00000555543 C15orf61A6NNL5 157 aa15.61■□□□□ 0.09
VTI1B-205ENST00000555543 H0Y980 276 aa15.61■□□□□ 0.09
VTI1B-205ENST00000555543 SNAPC5O75971 98 aa15.61■□□□□ 0.09
VTI1B-205ENST00000555543 OR13C7P0DN81 318 aa15.61■□□□□ 0.09
VTI1B-205ENST00000555543 CLEC19AQ6UXS0 136 aa15.61■□□□□ 0.09
VTI1B-205ENST00000555543 GDPD1Q8N9F7 314 aa15.61■□□□□ 0.09
VTI1B-205ENST00000555543 OR4C16Q8NGL9 310 aa15.61■□□□□ 0.09
VTI1B-205ENST00000555543 PRNDQ9UKY0 176 aa15.61■□□□□ 0.09
VTI1B-205ENST00000555543 GSTZ1O43708 216 aaPredicted RBP15.6■□□□□ 0.09
VTI1B-205ENST00000555543 SERPINE2P07093 398 aa15.6■□□□□ 0.09
VTI1B-205ENST00000555543 MFAP2P55001 183 aa15.6■□□□□ 0.09
VTI1B-205ENST00000555543 MEF2DQ14814 521 aa15.6■□□□□ 0.09
VTI1B-205ENST00000555543 IZUMO4Q1ZYL8 232 aa15.6■□□□□ 0.09
VTI1B-205ENST00000555543 LSM10Q969L4 123 aaKnown RBP15.6■□□□□ 0.09
VTI1B-205ENST00000555543 EEF1AKMT3Q96AZ1 226 aa15.6■□□□□ 0.09
VTI1B-205ENST00000555543 TSC22D3Q99576 134 aa15.6■□□□□ 0.09
VTI1B-205ENST00000555543 RABL2AQ9UBK7 228 aaPredicted RBP15.6■□□□□ 0.09
VTI1B-205ENST00000555543 RABL2BQ9UNT1 228 aa15.6■□□□□ 0.09
VTI1B-205ENST00000555543 OR2C1O95371 312 aa15.59■□□□□ 0.09
VTI1B-205ENST00000555543 IGKV1-5P01602 117 aa15.59■□□□□ 0.09
VTI1B-205ENST00000555543 AKAIN1P0CW23 69 aa15.59■□□□□ 0.09
VTI1B-205ENST00000555543 EDN2P20800 178 aa15.59■□□□□ 0.09
VTI1B-205ENST00000555543 ARL3P36405 182 aa15.59■□□□□ 0.09
VTI1B-205ENST00000555543 TATDN3Q17R31 274 aa15.59■□□□□ 0.09
VTI1B-205ENST00000555543 FAM209BQ5JX69 171 aa15.59■□□□□ 0.09
VTI1B-205ENST00000555543 ADAMTSL5Q6ZMM2 481 aa15.59■□□□□ 0.09
VTI1B-205ENST00000555543 H2BFWTQ7Z2G1 175 aa15.59■□□□□ 0.09
VTI1B-205ENST00000555543 OR5B3Q8NH48 314 aa15.59■□□□□ 0.09
VTI1B-205ENST00000555543 ZFAND1Q8TCF1 268 aa15.59■□□□□ 0.09
VTI1B-205ENST00000555543 COPZ2Q9P299 210 aa15.59■□□□□ 0.09
VTI1B-205ENST00000555543 C3orf85A0A1B0GTC6 90 aa15.58■□□□□ 0.08
VTI1B-205ENST00000555543 ANKRD20A5PA0PJZ0 165 aa15.58■□□□□ 0.08
VTI1B-205ENST00000555543 GGCTO75223 188 aaKnown RBP15.58■□□□□ 0.08
VTI1B-205ENST00000555543 CTSDP07339 412 aaPredicted RBP15.58■□□□□ 0.08
VTI1B-205ENST00000555543 SP6Q3SY56 376 aa15.58■□□□□ 0.08
VTI1B-205ENST00000555543 HSD17B13Q7Z5P4 300 aaPredicted RBP15.58■□□□□ 0.08
VTI1B-205ENST00000555543 ZNF502Q8TBZ5 544 aa15.58■□□□□ 0.08
VTI1B-205ENST00000555543 SIGLEC8Q9NYZ4 499 aa15.58■□□□□ 0.08
VTI1B-205ENST00000555543 F11RQ9Y624 299 aaKnown RBP15.58■□□□□ 0.08
VTI1B-205ENST00000555543 SMAD5-AS1Q9Y6J3 95 aa15.58■□□□□ 0.08
VTI1B-205ENST00000555543 FABP12A6NFH5 140 aa15.57■□□□□ 0.08
VTI1B-205ENST00000555543 DISC1C4P0D8 188 aa15.57■□□□□ 0.08
VTI1B-205ENST00000555543 P0C879 139 aa15.57■□□□□ 0.08
VTI1B-205ENST00000555543 OR4A16Q8NH70 328 aa15.57■□□□□ 0.08
VTI1B-205ENST00000555543 CXorf58Q96LI9 332 aa15.57■□□□□ 0.08
VTI1B-205ENST00000555543 RTBDNQ9BSG5 229 aaPredicted RBP15.57■□□□□ 0.08
VTI1B-205ENST00000555543 ZC4H2Q9NQZ6 224 aa15.57■□□□□ 0.08
VTI1B-205ENST00000555543 FKBP11Q9NYL4 201 aa15.57■□□□□ 0.08
VTI1B-205ENST00000555543 PEMTQ9UBM1 199 aa15.57■□□□□ 0.08
VTI1B-205ENST00000555543 TRBV7-1A0A0A6YYK4 115 aa15.56■□□□□ 0.08
VTI1B-205ENST00000555543 CLEC3BP05452 202 aa15.56■□□□□ 0.08
VTI1B-205ENST00000555543 GPR183P32249 361 aa15.56■□□□□ 0.08
VTI1B-205ENST00000555543 SLC25A24Q6NUK1 477 aa15.56■□□□□ 0.08
VTI1B-205ENST00000555543 CCDC71LQ8N9Z2 235 aa15.56■□□□□ 0.08
VTI1B-205ENST00000555543 OR51S1Q8NGJ8 323 aa15.56■□□□□ 0.08
VTI1B-205ENST00000555543 TMEM56Q96MV1 263 aa15.56■□□□□ 0.08
VTI1B-205ENST00000555543 C5orf66Q9H5L9 145 aa15.56■□□□□ 0.08
VTI1B-205ENST00000555543 IZUMO1RA6ND01 250 aa15.55■□□□□ 0.08
VTI1B-205ENST00000555543 UCP1P25874 307 aa15.55■□□□□ 0.08
VTI1B-205ENST00000555543 MECP2P51608 486 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms