RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 FAM90A18PA6NE21 464 aa10.16□□□□□ -0.78
ARHGEF40-206ENST00000555232 FAM90A16PA6NEW6 464 aa10.16□□□□□ -0.78
ARHGEF40-206ENST00000555232 FAM90A20PA6NIJ5 464 aa10.16□□□□□ -0.78
ARHGEF40-206ENST00000555232 FAM90A8PA6NJQ4 464 aa10.16□□□□□ -0.78
ARHGEF40-206ENST00000555232 FAM90A7PA6NKC0 464 aa10.16□□□□□ -0.78
ARHGEF40-206ENST00000555232 FAM90A22PA8MWA6 464 aa10.16□□□□□ -0.78
ARHGEF40-206ENST00000555232 FAM90A12PA8MX19 464 aa10.16□□□□□ -0.78
ARHGEF40-206ENST00000555232 FAM90A5PA8MXJ8 464 aa10.16□□□□□ -0.78
ARHGEF40-206ENST00000555232 FAM90A23PA8MXZ1 464 aa10.16□□□□□ -0.78
ARHGEF40-206ENST00000555232 H3BQ15 152 aa10.16□□□□□ -0.78
ARHGEF40-206ENST00000555232 FAM90A15PP0C7V4 464 aa10.16□□□□□ -0.78
ARHGEF40-206ENST00000555232 FAM90A13PP0C7W8 464 aa10.16□□□□□ -0.78
ARHGEF40-206ENST00000555232 FAM90A14PP0C7W9 464 aa10.16□□□□□ -0.78
ARHGEF40-206ENST00000555232 FAM90A24PP0C7X0 464 aa10.16□□□□□ -0.78
ARHGEF40-206ENST00000555232 PPIAL4GP0DN37 164 aa10.16□□□□□ -0.78
ARHGEF40-206ENST00000555232 ACOT6Q3I5F7 207 aaPredicted RBP10.16□□□□□ -0.78
ARHGEF40-206ENST00000555232 LYRM2Q9NU23 88 aaPredicted RBP10.16□□□□□ -0.78
ARHGEF40-206ENST00000555232 A8MWP6 167 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 IGHV3-23P01764 117 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 TMEM41BQ5BJD5 291 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 RNASE6Q93091 150 aaKnown RBP10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 NUDT16L1Q9BRJ7 211 aaKnown RBP10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 NUP210LQ5VU65 1888 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 SAA2-SAA4A0A096LPE2 208 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 MBD3L4A6NDZ8 208 aaPredicted RBP10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 MBD3L3A6NE82 208 aaPredicted RBP10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 MBD3L5A6NJ08 208 aaPredicted RBP10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 MMP23AO75900 390 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 SAA2P0DJI9 122 aaPredicted RBP10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 GNLYP22749 145 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 DLK1P80370 383 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 PRR31Q5SQ13 230 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 OR10W1Q8NGF6 305 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 OR8B3Q8NGG8 313 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 OR1B1Q8NGR6 318 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 MBD3L2Q8NHZ7 208 aaPredicted RBP10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 OR8B2Q96RD0 313 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 PPP5D1E7EU14 171 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 M0R143 59 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 CD1BP29016 333 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 ADIPOQQ15848 244 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 MLANAQ16655 118 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 VMA21Q3ZAQ7 101 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 SLC35E4Q6ICL7 350 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 LINC00596Q86U02 117 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 HIST1H2BLQ99880 126 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 SNHG12Q9BXW3 62 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 MRPL20Q9BYC9 149 aaKnown RBP10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 TUBG2Q9NRH3 451 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 PLA2G2EQ9NZK7 142 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 TCF19Q9Y242 345 aa10.15□□□□□ -0.78
ARHGEF40-206ENST00000555232 CHD3Q12873 2000 aaKnown RBP10.15□□□□□ -0.79
ARHGEF40-206ENST00000555232 COX7A2P2O60397 106 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 IGKV1-5P01602 117 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 PSG5Q15238 335 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 TMEM147Q9BVK8 224 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 TMEM50AO95807 157 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 UCNP55089 124 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 LYZP61626 148 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 ECSCRQ19T08 205 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 WDR25Q64LD2 544 aaPredicted RBP10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 PCSK4Q6UW60 755 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 NHLRC2Q8NBF2 726 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 FAM210BQ96KR6 192 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 TMEM208Q9BTX3 173 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 CHODLQ9H9P2 273 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 UQCRFS1P47985 274 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 THBS3P49746 956 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 MORN2Q502X0 79 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 LYPD6Q86Y78 171 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 C1orf162Q8NEQ5 155 aaPredicted RBP10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 IDI2-AS1Q9NZ38 188 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 SRRM5B3KS81 715 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 K7ENP7 123 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 HPRT1P00492 218 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 OR9G9P0C7N8 305 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 RAB4AP20338 218 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 OR10J1P30954 320 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 RND3P61587 244 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 TAF15Q92804 592 aaKnown RBP eCLIP10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 FBXL15Q9H469 300 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 LINC00527Q9UJ94 153 aa10.14□□□□□ -0.79
ARHGEF40-206ENST00000555232 IGHV3-49A0A0A0MS15 119 aa10.13□□□□□ -0.79
ARHGEF40-206ENST00000555232 J3KRW8 73 aa10.13□□□□□ -0.79
ARHGEF40-206ENST00000555232 MOSP00540 346 aa10.13□□□□□ -0.79
ARHGEF40-206ENST00000555232 COL8A2P25067 703 aa10.13□□□□□ -0.79
ARHGEF40-206ENST00000555232 APOBEC3AP31941 199 aaPredicted RBP10.13□□□□□ -0.79
ARHGEF40-206ENST00000555232 NBL1P41271 181 aa10.13□□□□□ -0.79
ARHGEF40-206ENST00000555232 UCP3P55916 312 aa10.13□□□□□ -0.79
ARHGEF40-206ENST00000555232 ELOBQ15370 118 aa10.13□□□□□ -0.79
ARHGEF40-206ENST00000555232 MAPK1IP1LQ8NDC0 245 aa10.13□□□□□ -0.79
ARHGEF40-206ENST00000555232 SLC24A4Q8NFF2 622 aa10.13□□□□□ -0.79
ARHGEF40-206ENST00000555232 RAB24Q969Q5 203 aa10.13□□□□□ -0.79
ARHGEF40-206ENST00000555232 PERPQ96FX8 193 aa10.13□□□□□ -0.79
ARHGEF40-206ENST00000555232 IL19Q9UHD0 177 aa10.13□□□□□ -0.79
ARHGEF40-206ENST00000555232 TIMP3P35625 211 aa10.13□□□□□ -0.79
ARHGEF40-206ENST00000555232 LY6EQ16553 131 aa10.13□□□□□ -0.79
ARHGEF40-206ENST00000555232 DAZAP1Q96EP5 407 aaKnown RBP10.13□□□□□ -0.79
ARHGEF40-206ENST00000555232 PRB1P04280 392 aa10.13□□□□□ -0.79
ARHGEF40-206ENST00000555232 SEC11BP0C7V7 166 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms