RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 NAGKQ9UJ70 344 aa12.22□□□□□ -0.45
XRCC3-211ENST00000555055 SPTAN1Q13813 2472 aaKnown RBP12.21□□□□□ -0.45
XRCC3-211ENST00000555055 TRGV8A0A0C4DH27 118 aa12.21□□□□□ -0.45
XRCC3-211ENST00000555055 K7ENP7 123 aa12.21□□□□□ -0.45
XRCC3-211ENST00000555055 IGKV1D-33P01593 117 aa12.21□□□□□ -0.45
XRCC3-211ENST00000555055 IGKV1-33P01594 117 aa12.21□□□□□ -0.45
XRCC3-211ENST00000555055 MZT1Q08AG7 82 aa12.21□□□□□ -0.45
XRCC3-211ENST00000555055 TMEM37Q8WXS4 190 aa12.21□□□□□ -0.45
XRCC3-211ENST00000555055 GAFA1Q96PS6 74 aa12.21□□□□□ -0.45
XRCC3-211ENST00000555055 POLR3KQ9Y2Y1 108 aaPredicted RBP12.21□□□□□ -0.45
XRCC3-211ENST00000555055 P0C879 139 aa12.21□□□□□ -0.46
XRCC3-211ENST00000555055 G0S2P27469 103 aa12.21□□□□□ -0.46
XRCC3-211ENST00000555055 FOXL1Q12952 345 aa12.21□□□□□ -0.46
XRCC3-211ENST00000555055 CT45A1Q5HYN5 189 aa12.21□□□□□ -0.46
XRCC3-211ENST00000555055 PRAMEF5Q5TYX0 476 aa12.21□□□□□ -0.46
XRCC3-211ENST00000555055 CT45A3Q8NHU0 189 aa12.21□□□□□ -0.46
XRCC3-211ENST00000555055 DTD1Q8TEA8 209 aa12.21□□□□□ -0.46
XRCC3-211ENST00000555055 C20orf144Q9BQM9 153 aa12.21□□□□□ -0.46
XRCC3-211ENST00000555055 VPS13CQ709C8 3753 aa12.2□□□□□ -0.46
XRCC3-211ENST00000555055 TANC2Q9HCD6 1990 aa12.2□□□□□ -0.46
XRCC3-211ENST00000555055 FCN3O75636 299 aa12.2□□□□□ -0.46
XRCC3-211ENST00000555055 GNB2P62879 340 aa12.2□□□□□ -0.46
XRCC3-211ENST00000555055 TFF3Q07654 80 aa12.2□□□□□ -0.46
XRCC3-211ENST00000555055 LYG1Q8N1E2 194 aa12.2□□□□□ -0.46
XRCC3-211ENST00000555055 TMEM147Q9BVK8 224 aa12.2□□□□□ -0.46
XRCC3-211ENST00000555055 HSPB7Q9UBY9 170 aa12.2□□□□□ -0.46
XRCC3-211ENST00000555055 PXMP4Q9Y6I8 212 aa12.2□□□□□ -0.46
XRCC3-211ENST00000555055 SOX15O60248 233 aa12.2□□□□□ -0.46
XRCC3-211ENST00000555055 ADH4P08319 380 aa12.2□□□□□ -0.46
XRCC3-211ENST00000555055 LINC00614P0C842 121 aa12.2□□□□□ -0.46
XRCC3-211ENST00000555055 DLX1P56177 255 aa12.2□□□□□ -0.46
XRCC3-211ENST00000555055 HTD2P86397 168 aa12.2□□□□□ -0.46
XRCC3-211ENST00000555055 STUMQ69YW2 141 aa12.2□□□□□ -0.46
XRCC3-211ENST00000555055 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.2□□□□□ -0.46
XRCC3-211ENST00000555055 IL19Q9UHD0 177 aa12.2□□□□□ -0.46
XRCC3-211ENST00000555055 MED13LQ71F56 2210 aa12.19□□□□□ -0.46
XRCC3-211ENST00000555055 SAA2-SAA4A0A096LPE2 208 aa12.19□□□□□ -0.46
XRCC3-211ENST00000555055 SAA2P0DJI9 122 aaPredicted RBP12.19□□□□□ -0.46
XRCC3-211ENST00000555055 IL3RAP26951 378 aa12.19□□□□□ -0.46
XRCC3-211ENST00000555055 ACSM6Q6P461 480 aa12.19□□□□□ -0.46
XRCC3-211ENST00000555055 OR4F5Q8NH21 305 aa12.19□□□□□ -0.46
XRCC3-211ENST00000555055 OR4F4Q96R69 305 aa12.19□□□□□ -0.46
XRCC3-211ENST00000555055 CBLN4Q9NTU7 201 aa12.19□□□□□ -0.46
XRCC3-211ENST00000555055 PLXNB1O43157 2135 aa12.19□□□□□ -0.46
XRCC3-211ENST00000555055 DLEU1O43261 78 aa12.19□□□□□ -0.46
XRCC3-211ENST00000555055 PDE6DO43924 150 aa12.19□□□□□ -0.46
XRCC3-211ENST00000555055 PLAUP00749 431 aa12.19□□□□□ -0.46
XRCC3-211ENST00000555055 ESDP10768 282 aa12.19□□□□□ -0.46
XRCC3-211ENST00000555055 CCL3L1P16619 93 aa12.19□□□□□ -0.46
XRCC3-211ENST00000555055 CFHR2P36980 270 aa12.19□□□□□ -0.46
XRCC3-211ENST00000555055 VWC2Q2TAL6 325 aa12.19□□□□□ -0.46
XRCC3-211ENST00000555055 C1orf174Q8IYL3 243 aa12.19□□□□□ -0.46
XRCC3-211ENST00000555055 ZBTB34Q8NCN2 500 aa12.19□□□□□ -0.46
XRCC3-211ENST00000555055 PPP1R35Q8TAP8 253 aa12.19□□□□□ -0.46
XRCC3-211ENST00000555055 LINC01560Q8TB33 94 aa12.19□□□□□ -0.46
XRCC3-211ENST00000555055 RND1Q92730 232 aa12.19□□□□□ -0.46
XRCC3-211ENST00000555055 DIRC2Q96SL1 478 aa12.19□□□□□ -0.46
XRCC3-211ENST00000555055 ATG101Q9BSB4 218 aa12.19□□□□□ -0.46
XRCC3-211ENST00000555055 TRAV9-1A0A075B6T8 112 aa12.18□□□□□ -0.46
XRCC3-211ENST00000555055 FAM90A27PA6NNH2 459 aa12.18□□□□□ -0.46
XRCC3-211ENST00000555055 SCGB1D1O95968 90 aa12.18□□□□□ -0.46
XRCC3-211ENST00000555055 RPLP1P05386 114 aaKnown RBP12.18□□□□□ -0.46
XRCC3-211ENST00000555055 RANP62826 216 aaKnown RBP12.18□□□□□ -0.46
XRCC3-211ENST00000555055 MSMO1Q15800 293 aa12.18□□□□□ -0.46
XRCC3-211ENST00000555055 ZCCHC14Q8WYQ9 949 aaKnown RBP12.18□□□□□ -0.46
XRCC3-211ENST00000555055 HSD17B10Q99714 261 aaKnown RBP12.18□□□□□ -0.46
XRCC3-211ENST00000555055 JPT1Q9UK76 154 aa12.18□□□□□ -0.46
XRCC3-211ENST00000555055 MAP1AP78559 2803 aaPredicted RBP12.18□□□□□ -0.46
XRCC3-211ENST00000555055 YPEL3P61236 119 aaPredicted RBP12.18□□□□□ -0.46
XRCC3-211ENST00000555055 PAFAH1B2P68402 229 aa12.18□□□□□ -0.46
XRCC3-211ENST00000555055 CDSNQ15517 529 aa12.18□□□□□ -0.46
XRCC3-211ENST00000555055 LYPD2Q6UXB3 125 aa12.18□□□□□ -0.46
XRCC3-211ENST00000555055 OR10G9Q8NGN4 311 aa12.18□□□□□ -0.46
XRCC3-211ENST00000555055 OR10G7Q8NGN6 311 aa12.18□□□□□ -0.46
XRCC3-211ENST00000555055 TXNDC17Q9BRA2 123 aa12.18□□□□□ -0.46
XRCC3-211ENST00000555055 LYNX1G3V0Z9 82 aa12.17□□□□□ -0.46
XRCC3-211ENST00000555055 GFRA3O60609 400 aa12.17□□□□□ -0.46
XRCC3-211ENST00000555055 LYNX1P0DP58 116 aa12.17□□□□□ -0.46
XRCC3-211ENST00000555055 GATA4P43694 442 aa12.17□□□□□ -0.46
XRCC3-211ENST00000555055 SELENOTP62341 195 aa12.17□□□□□ -0.46
XRCC3-211ENST00000555055 MS4A10Q96PG2 267 aa12.17□□□□□ -0.46
XRCC3-211ENST00000555055 SLC25A22Q9H936 323 aa12.17□□□□□ -0.46
XRCC3-211ENST00000555055 TRAPPC1Q9Y5R8 145 aa12.17□□□□□ -0.46
XRCC3-211ENST00000555055 TRGV10A0A0A0MS01 117 aa12.17□□□□□ -0.46
XRCC3-211ENST00000555055 KBTBD11-OT1A0A1B0GTJ5 212 aa12.17□□□□□ -0.46
XRCC3-211ENST00000555055 C17orf100A8MU93 164 aa12.17□□□□□ -0.46
XRCC3-211ENST00000555055 YPEL1O60688 119 aa12.17□□□□□ -0.46
XRCC3-211ENST00000555055 IRF2P14316 349 aa12.17□□□□□ -0.46
XRCC3-211ENST00000555055 ZNF25P17030 456 aaPredicted RBP12.17□□□□□ -0.46
XRCC3-211ENST00000555055 TNFSF4P23510 183 aa12.17□□□□□ -0.46
XRCC3-211ENST00000555055 REG1BP48304 166 aa12.17□□□□□ -0.46
XRCC3-211ENST00000555055 TEX43Q6ZNM6 134 aa12.17□□□□□ -0.46
XRCC3-211ENST00000555055 LINC01551Q86U37 167 aa12.17□□□□□ -0.46
XRCC3-211ENST00000555055 YPEL2Q96QA6 119 aa12.17□□□□□ -0.46
XRCC3-211ENST00000555055 SAP30LQ9HAJ7 183 aa12.17□□□□□ -0.46
XRCC3-211ENST00000555055 SSUH2Q9Y2M2 353 aa12.17□□□□□ -0.46
XRCC3-211ENST00000555055 ZFHX3Q15911 3703 aa12.17□□□□□ -0.46
XRCC3-211ENST00000555055 F6UZH7 168 aa12.16□□□□□ -0.46
XRCC3-211ENST00000555055 CGB3P0DN86 165 aa12.16□□□□□ -0.46
XRCC3-211ENST00000555055 CGB7P0DN87 165 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms