RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 DRAM1Q8N682 238 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 TEX45Q8NA69 505 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 KCNS1Q96KK3 526 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 ABHD1Q96SE0 405 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 PSME4Q14997 1843 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 PAX1P15863 534 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 DRD3P35462 400 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 PRRC2AP48634 2157 aaKnown RBP5.88□□□□□ -1.47
SYNE2-216ENST00000555002 TRAV8-4A0A0B4J246 113 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 AHRRA9YTQ3 701 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 SAP30O75446 220 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 VENTXO95231 258 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 CGB7P0DN87 165 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 LEMD1Q68G75 181 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 LURAP1LQ8IV03 231 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 WNT2BQ93097 391 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 NPIPB8E9PQR5 432 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 NPIPB9F8W1W9 429 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 NPIPB7O75200 414 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 CISD3P0C7P0 127 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 PSG4Q00888 419 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 MS4A6AQ9H2W1 248 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 BSPH1Q075Z2 132 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 UNC119Q13432 240 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 DEFB104AQ8WTQ1 72 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 CLPSL1A2RUU4 121 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 APOHP02749 345 aaPredicted RBP5.88□□□□□ -1.47
SYNE2-216ENST00000555002 FXYD7P58549 80 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 ADARB2-AS1A8MUL3 147 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 C1QL1O75973 258 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 EVI2AP22794 236 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 HIST1H4AP62805 103 aaKnown RBP5.88□□□□□ -1.47
SYNE2-216ENST00000555002 HOGA1Q86XE5 327 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 TMEM86BQ8N661 226 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 TXNDC17Q9BRA2 123 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 OGG1O15527 345 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 GCHFRP30047 84 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 NPIPB3Q92617 1050 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 SH3BGRL3Q9H299 93 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 KLHDC2Q9Y2U9 406 aa5.88□□□□□ -1.47
SYNE2-216ENST00000555002 MARCH11A6NNE9 402 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 B9A039 149 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 TOMM40O96008 361 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 C8orf88P0DMB2 117 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 FOXA3P55318 350 aaPredicted RBP5.87□□□□□ -1.47
SYNE2-216ENST00000555002 FBLN7Q53RD9 439 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 PKD1L3Q7Z443 1732 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 TGIF1Q15583 401 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 PMCHL1Q16048 86 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 GAGE2EQ4V326 116 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 VKORC1Q9BQB6 163 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 GAGE2DQ9UEU5 116 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 CXCL3P19876 107 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 C8orf46Q8TAG6 207 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 HELZP42694 1942 aaKnown RBP5.87□□□□□ -1.47
SYNE2-216ENST00000555002 A0A1B0GV90 55 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 LILRA1O75019 489 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 VSIG8P0DPA2 414 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 C1QTNF12Q5T7M4 302 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 MRAPQ8TCY5 172 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 ZNF721Q8TF20 911 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 ZNF236Q9UL36 1845 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 CEACAM8P31997 349 aaPredicted RBP5.87□□□□□ -1.47
SYNE2-216ENST00000555002 SCARF2Q96GP6 870 aaPredicted RBP5.87□□□□□ -1.47
SYNE2-216ENST00000555002 IGKV1D-42A0A075B6H8 117 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 LNP1A1A4G5 178 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 CLPSP04118 112 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 COLQQ9Y215 455 aaPredicted RBP5.87□□□□□ -1.47
SYNE2-216ENST00000555002 ZNF79Q15937 498 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 MALRD1Q5VYJ5 2156 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 IGHV1-45A0A0A0MS14 117 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 A0A1W2PQD3 144 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 C14orf144Q96I85 54 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 CTAG1AP78358 180 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 TNFRSF9Q07011 255 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 TMEM222Q9H0R3 208 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 CYSLTR1Q9Y271 337 aa5.87□□□□□ -1.47
SYNE2-216ENST00000555002 CYP2G1PQ6ZSU1 146 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 SLIRPQ9GZT3 109 aaKnown RBP5.86□□□□□ -1.47
SYNE2-216ENST00000555002 ST20Q9HBF5 79 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 GP6Q9HCN6 339 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 C21orf62Q9NYP8 219 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 DSCAML1Q8TD84 2053 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 QSER1Q2KHR3 1735 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 PAX4O43316 350 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 DMKNQ6E0U4 476 aaPredicted RBP5.86□□□□□ -1.47
SYNE2-216ENST00000555002 C1orf122Q6ZSJ8 110 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 ZAR1Q86SH2 424 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 ZNF625Q96I27 306 aaPredicted RBP5.86□□□□□ -1.47
SYNE2-216ENST00000555002 NPCDR1Q9BY65 106 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 FBXL15Q9H469 300 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 TCF19Q9Y242 345 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 CYB5R2Q6BCY4 276 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 KLF14Q8TD94 323 aaPredicted RBP5.86□□□□□ -1.47
SYNE2-216ENST00000555002 SRXN1Q9BYN0 137 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 ADAMTSL1Q8N6G6 1762 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 RBBP6Q7Z6E9 1792 aaKnown RBP5.86□□□□□ -1.47
SYNE2-216ENST00000555002 CDKN1AP38936 164 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 GLIPR1P48060 266 aa5.86□□□□□ -1.47
SYNE2-216ENST00000555002 SERF2P84101 59 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms