RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 C2orf50Q96LR7 162 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 NOL4LQ96MY1 436 aaPredicted RBP8.02□□□□□ -1.13
SYNE2-215ENST00000554997 FYTTD1Q96QD9 318 aaKnown RBP8.02□□□□□ -1.13
SYNE2-215ENST00000554997 FAM103A1Q9BTL3 118 aaKnown RBP8.02□□□□□ -1.13
SYNE2-215ENST00000554997 PDCD10Q9BUL8 212 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 HSPB7Q9UBY9 170 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 FBXO7Q9Y3I1 522 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 WSB1Q9Y6I7 421 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 C5orf51A6NDU8 294 aa8.01□□□□□ -1.13
SYNE2-215ENST00000554997 FAM90A26D6RGX4 464 aa8.01□□□□□ -1.13
SYNE2-215ENST00000554997 G3V318 75 aa8.01□□□□□ -1.13
SYNE2-215ENST00000554997 PPIFP30405 207 aaKnown RBP8.01□□□□□ -1.13
SYNE2-215ENST00000554997 CYCSP99999 105 aaKnown RBP8.01□□□□□ -1.13
SYNE2-215ENST00000554997 IL15RAQ13261 267 aa8.01□□□□□ -1.13
SYNE2-215ENST00000554997 KRTAP24-1Q3LI83 254 aa8.01□□□□□ -1.13
SYNE2-215ENST00000554997 C19orf54Q5BKX5 351 aa8.01□□□□□ -1.13
SYNE2-215ENST00000554997 CXorf66Q5JRM2 361 aaPredicted RBP8.01□□□□□ -1.13
SYNE2-215ENST00000554997 C10orf55Q5SWW7 151 aa8.01□□□□□ -1.13
SYNE2-215ENST00000554997 ASPHD1Q5U4P2 390 aa8.01□□□□□ -1.13
SYNE2-215ENST00000554997 UNQ5815/PRO19632Q6UWF5 114 aa8.01□□□□□ -1.13
SYNE2-215ENST00000554997 ZBTB8BQ8NAP8 495 aaPredicted RBP8.01□□□□□ -1.13
SYNE2-215ENST00000554997 OR4D5Q8NGN0 318 aa8.01□□□□□ -1.13
SYNE2-215ENST00000554997 MED28Q9H204 178 aa8.01□□□□□ -1.13
SYNE2-215ENST00000554997 GSKIPQ9P0R6 139 aa8.01□□□□□ -1.13
SYNE2-215ENST00000554997 LINC00527Q9UJ94 153 aa8.01□□□□□ -1.13
SYNE2-215ENST00000554997 RNF114Q9Y508 228 aa8.01□□□□□ -1.13
SYNE2-215ENST00000554997 ATRQ13535 2644 aa8.01□□□□□ -1.13
SYNE2-215ENST00000554997 DNHD1Q96M86 4753 aa8.01□□□□□ -1.13
SYNE2-215ENST00000554997 A0A1W2PN81 502 aa8□□□□□ -1.13
SYNE2-215ENST00000554997 IGLC7A0M8Q6 106 aa8□□□□□ -1.13
SYNE2-215ENST00000554997 HMX3A6NHT5 357 aa8□□□□□ -1.13
SYNE2-215ENST00000554997 FAM25EA8MYX2 175 aa8□□□□□ -1.13
SYNE2-215ENST00000554997 CCSO14618 274 aa8□□□□□ -1.13
SYNE2-215ENST00000554997 GOSR2O14653 212 aa8□□□□□ -1.13
SYNE2-215ENST00000554997 MED6O75586 246 aa8□□□□□ -1.13
SYNE2-215ENST00000554997 BRI3O95415 125 aa8□□□□□ -1.13
SYNE2-215ENST00000554997 CRYGCP07315 174 aa8□□□□□ -1.13
SYNE2-215ENST00000554997 MDKP21741 143 aaPredicted RBP8□□□□□ -1.13
SYNE2-215ENST00000554997 PSMB6P28072 239 aa8□□□□□ -1.13
SYNE2-215ENST00000554997 CHRNA7P36544 502 aa8□□□□□ -1.13
SYNE2-215ENST00000554997 PROK1P58294 105 aa8□□□□□ -1.13
SYNE2-215ENST00000554997 SLC35B1P78383 322 aa8□□□□□ -1.13
SYNE2-215ENST00000554997 ERHP84090 104 aaKnown RBP8□□□□□ -1.13
SYNE2-215ENST00000554997 CFHR3Q02985 330 aa8□□□□□ -1.13
SYNE2-215ENST00000554997 WT1-ASQ06250 92 aa8□□□□□ -1.13
SYNE2-215ENST00000554997 TNFRSF9Q07011 255 aa8□□□□□ -1.13
SYNE2-215ENST00000554997 TMEM95Q3KNT9 176 aa8□□□□□ -1.13
SYNE2-215ENST00000554997 KRTAP21-3Q3LHN1 58 aa8□□□□□ -1.13
SYNE2-215ENST00000554997 MRPL41Q8IXM3 137 aaKnown RBP8□□□□□ -1.13
SYNE2-215ENST00000554997 OR5T1Q8NG75 326 aa8□□□□□ -1.13
SYNE2-215ENST00000554997 OR10W1Q8NGF6 305 aa8□□□□□ -1.13
SYNE2-215ENST00000554997 OR5M8Q8NGP6 311 aa8□□□□□ -1.13
SYNE2-215ENST00000554997 HINT2Q9BX68 163 aa8□□□□□ -1.13
SYNE2-215ENST00000554997 PSMB11A5LHX3 300 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 NPIPB5A8MRT5 1133 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 SIX6O95475 246 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 LY86O95711 162 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 IGLV1-40P01703 118 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 IGHG4P01861 327 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 OR13C7P0DN81 318 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 AREGP15514 252 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 CTRB1P17538 263 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 NKX2-1P43699 371 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-215ENST00000554997 H2BFSP57053 126 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 RRAS2P62070 204 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-215ENST00000554997 SRSF4Q08170 494 aaKnown RBP7.99□□□□□ -1.13
SYNE2-215ENST00000554997 FCN2Q15485 313 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 ECSCRQ19T08 205 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 KLK9Q2XQG4 91 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 CTRB2Q6GPI1 263 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 TEX38Q6PEX7 206 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 OR2C3Q8N628 320 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 COMMD1Q8N668 190 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 OR5AU1Q8NGC0 362 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 WIPF2Q8TF74 440 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-215ENST00000554997 C19orf24Q9BVV8 132 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 NMES1Q9C002 83 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 HIPK2Q9H2X6 1198 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 RBKSQ9H477 322 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 PLEKHA3Q9HB20 300 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 ENY2Q9NPA8 101 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 MGAT4CQ9UBM8 478 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 KLK9Q9UKQ9 250 aa7.99□□□□□ -1.13
SYNE2-215ENST00000554997 CEBPZOSA8MTT3 80 aa7.98□□□□□ -1.13
SYNE2-215ENST00000554997 H3BUA1 57 aa7.98□□□□□ -1.13
SYNE2-215ENST00000554997 SYNGR2O43760 224 aa7.98□□□□□ -1.13
SYNE2-215ENST00000554997 SOX15O60248 233 aa7.98□□□□□ -1.13
SYNE2-215ENST00000554997 MBPP02686 304 aaPredicted RBP7.98□□□□□ -1.13
SYNE2-215ENST00000554997 ELANEP08246 267 aa7.98□□□□□ -1.13
SYNE2-215ENST00000554997 APELAP0DMC3 54 aa7.98□□□□□ -1.13
SYNE2-215ENST00000554997 CXCL3P19876 107 aa7.98□□□□□ -1.13
SYNE2-215ENST00000554997 SNCAP37840 140 aa7.98□□□□□ -1.13
SYNE2-215ENST00000554997 ATP5IP56385 69 aaPredicted RBP7.98□□□□□ -1.13
SYNE2-215ENST00000554997 FOXE3Q13461 319 aa7.98□□□□□ -1.13
SYNE2-215ENST00000554997 SPINK9Q5DT21 86 aa7.98□□□□□ -1.13
SYNE2-215ENST00000554997 ZNF329Q86UD4 541 aa7.98□□□□□ -1.13
SYNE2-215ENST00000554997 KLHDC1Q8N7A1 406 aa7.98□□□□□ -1.13
SYNE2-215ENST00000554997 OR1L6Q8NGR2 347 aa7.98□□□□□ -1.13
SYNE2-215ENST00000554997 FAM110DQ8TAY7 271 aaPredicted RBP7.98□□□□□ -1.13
SYNE2-215ENST00000554997 DTD1Q8TEA8 209 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms