RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 CAV1Q03135 178 aa0.57□□□□□ -2.32
SCFD1-214ENST00000554819 DMTNQ08495 405 aa0.57□□□□□ -2.32
SCFD1-214ENST00000554819 PPP1R1AQ13522 171 aa0.57□□□□□ -2.32
SCFD1-214ENST00000554819 CST9Q5W186 159 aa0.57□□□□□ -2.32
SCFD1-214ENST00000554819 AAED1Q7RTV5 226 aa0.57□□□□□ -2.32
SCFD1-214ENST00000554819 TMEM161BQ8NDZ6 487 aa0.57□□□□□ -2.32
SCFD1-214ENST00000554819 C7orf50Q9BRJ6 194 aaKnown RBP0.57□□□□□ -2.32
SCFD1-214ENST00000554819 PAQR5Q9NXK6 330 aaPredicted RBP0.57□□□□□ -2.32
SCFD1-214ENST00000554819 ALPK2Q86TB3 2170 aa0.56□□□□□ -2.32
SCFD1-214ENST00000554819 TRBV6-7A0A0A0MS04 114 aa0.56□□□□□ -2.32
SCFD1-214ENST00000554819 FABP12A6NFH5 140 aa0.56□□□□□ -2.32
SCFD1-214ENST00000554819 F5H768 121 aa0.56□□□□□ -2.32
SCFD1-214ENST00000554819 KCNE1P15382 129 aa0.56□□□□□ -2.32
SCFD1-214ENST00000554819 CCL1P22362 96 aa0.56□□□□□ -2.32
SCFD1-214ENST00000554819 CD151P48509 253 aa0.56□□□□□ -2.32
SCFD1-214ENST00000554819 EIF2B2P49770 351 aaKnown RBP0.56□□□□□ -2.32
SCFD1-214ENST00000554819 RPL18Q07020 188 aaKnown RBP0.56□□□□□ -2.32
SCFD1-214ENST00000554819 GPR32P1Q8NGA4 272 aa0.56□□□□□ -2.32
SCFD1-214ENST00000554819 OR5B17Q8NGF7 314 aa0.56□□□□□ -2.32
SCFD1-214ENST00000554819 DNAJB3Q8WWF6 145 aa0.56□□□□□ -2.32
SCFD1-214ENST00000554819 C11orf40Q8WZ69 217 aa0.56□□□□□ -2.32
SCFD1-214ENST00000554819 C15orf41Q9Y2V0 281 aa0.56□□□□□ -2.32
SCFD1-214ENST00000554819 C1orf232A0A0U1RR37 186 aa0.55□□□□□ -2.32
SCFD1-214ENST00000554819 YEATS4O95619 227 aa0.55□□□□□ -2.32
SCFD1-214ENST00000554819 KRT7P08729 469 aa0.55□□□□□ -2.32
SCFD1-214ENST00000554819 ZNF80P51504 273 aaPredicted RBP0.55□□□□□ -2.32
SCFD1-214ENST00000554819 UBE2IP63279 158 aaKnown RBP0.55□□□□□ -2.32
SCFD1-214ENST00000554819 ZNF846Q147U1 533 aa0.55□□□□□ -2.32
SCFD1-214ENST00000554819 GLT8D1Q68CQ7 371 aa0.55□□□□□ -2.32
SCFD1-214ENST00000554819 PLEKHG7Q6ZR37 379 aa0.55□□□□□ -2.32
SCFD1-214ENST00000554819 LINC00471Q8N535 108 aa0.55□□□□□ -2.32
SCFD1-214ENST00000554819 IL36BQ9NZH7 164 aa0.55□□□□□ -2.32
SCFD1-214ENST00000554819 TTC21AQ8NDW8 1320 aa0.55□□□□□ -2.32
SCFD1-214ENST00000554819 FAM25EA8MYX2 175 aa0.54□□□□□ -2.32
SCFD1-214ENST00000554819 CALUO43852 315 aaPredicted RBP0.54□□□□□ -2.32
SCFD1-214ENST00000554819 OR5F1O95221 314 aa0.54□□□□□ -2.32
SCFD1-214ENST00000554819 REG1AP05451 166 aa0.54□□□□□ -2.32
SCFD1-214ENST00000554819 RPS4Y1P22090 263 aaKnown RBP0.54□□□□□ -2.32
SCFD1-214ENST00000554819 SUPT4H1P63272 117 aaKnown RBP0.54□□□□□ -2.32
SCFD1-214ENST00000554819 SYPL2Q5VXT5 272 aa0.54□□□□□ -2.32
SCFD1-214ENST00000554819 C10orf67Q8IYJ2 551 aa0.54□□□□□ -2.32
SCFD1-214ENST00000554819 WFDC11Q8NEX6 87 aa0.54□□□□□ -2.32
SCFD1-214ENST00000554819 LINC00526Q96FQ7 95 aa0.54□□□□□ -2.32
SCFD1-214ENST00000554819 FAM96AQ9H5X1 160 aa0.54□□□□□ -2.32
SCFD1-214ENST00000554819 TNRC6BQ9UPQ9 1833 aaKnown RBP0.53□□□□□ -2.32
SCFD1-214ENST00000554819 FABP5P3A8MUU1 101 aa0.53□□□□□ -2.32
SCFD1-214ENST00000554819 PFDN6O15212 129 aa0.53□□□□□ -2.32
SCFD1-214ENST00000554819 TYMSP04818 313 aa0.53□□□□□ -2.32
SCFD1-214ENST00000554819 STX5Q13190 355 aa0.53□□□□□ -2.32
SCFD1-214ENST00000554819 RSU1Q15404 277 aa0.53□□□□□ -2.32
SCFD1-214ENST00000554819 IBA57Q5T440 356 aaKnown RBP0.53□□□□□ -2.32
SCFD1-214ENST00000554819 ZNF550Q7Z398 422 aa0.53□□□□□ -2.32
SCFD1-214ENST00000554819 COMMD7Q86VX2 200 aa0.53□□□□□ -2.32
SCFD1-214ENST00000554819 CMTM5Q96DZ9 223 aa0.53□□□□□ -2.32
SCFD1-214ENST00000554819 DIRAS2Q96HU8 199 aa0.53□□□□□ -2.32
SCFD1-214ENST00000554819 MAP1LC3AQ9H492 121 aa0.53□□□□□ -2.32
SCFD1-214ENST00000554819 PLEKHJ1Q9NW61 149 aa0.53□□□□□ -2.32
SCFD1-214ENST00000554819 LOC110117498A0A087WWA1 95 aa0.52□□□□□ -2.33
SCFD1-214ENST00000554819 GOLGA8KD6RF30 607 aa0.52□□□□□ -2.33
SCFD1-214ENST00000554819 APOEP02649 317 aa0.52□□□□□ -2.33
SCFD1-214ENST00000554819 CLPSP04118 112 aa0.52□□□□□ -2.33
SCFD1-214ENST00000554819 MYL12AP19105 171 aa0.52□□□□□ -2.33
SCFD1-214ENST00000554819 BRS3P32247 399 aa0.52□□□□□ -2.33
SCFD1-214ENST00000554819 UBE2G2P60604 165 aa0.52□□□□□ -2.33
SCFD1-214ENST00000554819 MED21Q13503 144 aa0.52□□□□□ -2.33
SCFD1-214ENST00000554819 ZNF826PQ6ZT77 177 aa0.52□□□□□ -2.33
SCFD1-214ENST00000554819 C1orf158Q8N1D5 194 aa0.52□□□□□ -2.33
SCFD1-214ENST00000554819 TMEM106AQ96A25 262 aa0.52□□□□□ -2.33
SCFD1-214ENST00000554819 HDHD2Q9H0R4 259 aa0.52□□□□□ -2.33
SCFD1-214ENST00000554819 EFCAB1Q9HAE3 211 aa0.52□□□□□ -2.33
SCFD1-214ENST00000554819 IMP3Q9NV31 184 aaKnown RBP0.52□□□□□ -2.33
SCFD1-214ENST00000554819 COL4A5P29400 1685 aa0.52□□□□□ -2.33
SCFD1-214ENST00000554819 MAST2Q6P0Q8 1798 aa0.52□□□□□ -2.33
SCFD1-214ENST00000554819 EXPH5Q8NEV8 1989 aa0.52□□□□□ -2.33
SCFD1-214ENST00000554819 PRM2P04554 102 aa0.51□□□□□ -2.33
SCFD1-214ENST00000554819 FAM228BP0C875 321 aa0.51□□□□□ -2.33
SCFD1-214ENST00000554819 C8orf88P0DMB2 117 aa0.51□□□□□ -2.33
SCFD1-214ENST00000554819 UCHL3P15374 230 aa0.51□□□□□ -2.33
SCFD1-214ENST00000554819 RPL12P30050 165 aaKnown RBP0.51□□□□□ -2.33
SCFD1-214ENST00000554819 MAP2K4P45985 399 aa0.51□□□□□ -2.33
SCFD1-214ENST00000554819 MAP3K7CLP57077 242 aa0.51□□□□□ -2.33
SCFD1-214ENST00000554819 LCN15Q6UWW0 184 aa0.51□□□□□ -2.33
SCFD1-214ENST00000554819 DEFB125Q8N687 156 aa0.51□□□□□ -2.33
SCFD1-214ENST00000554819 OR4D11Q8NGI4 311 aa0.51□□□□□ -2.33
SCFD1-214ENST00000554819 ABCC11Q96J66 1382 aa0.51□□□□□ -2.33
SCFD1-214ENST00000554819 OBSCN-AS1Q96MR7 158 aa0.51□□□□□ -2.33
SCFD1-214ENST00000554819 LAMA4Q16363 1823 aa0.5□□□□□ -2.33
SCFD1-214ENST00000554819 DCCP43146 1447 aa0.5□□□□□ -2.33
SCFD1-214ENST00000554819 C19orf84I3L1E1 186 aa0.5□□□□□ -2.33
SCFD1-214ENST00000554819 COCHO43405 550 aa0.5□□□□□ -2.33
SCFD1-214ENST00000554819 CCL20P78556 96 aa0.5□□□□□ -2.33
SCFD1-214ENST00000554819 IFITM2Q01629 132 aa0.5□□□□□ -2.33
SCFD1-214ENST00000554819 COQ5Q5HYK3 327 aa0.5□□□□□ -2.33
SCFD1-214ENST00000554819 KRTAP19-3Q7Z4W3 81 aa0.5□□□□□ -2.33
SCFD1-214ENST00000554819 DEFB128Q7Z7B8 93 aa0.5□□□□□ -2.33
SCFD1-214ENST00000554819 FAM9CQ8IZT9 166 aa0.5□□□□□ -2.33
SCFD1-214ENST00000554819 MCFD2Q8NI22 146 aa0.5□□□□□ -2.33
SCFD1-214ENST00000554819 RASSF5Q8WWW0 418 aa0.5□□□□□ -2.33
SCFD1-214ENST00000554819 ATP6V1G3Q96LB4 118 aa0.5□□□□□ -2.33
SCFD1-214ENST00000554819 CNBD2Q96M20 576 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms