RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 DUS4LO95620 317 aaKnown RBP4.99□□□□□ -1.61
SCFD1-212ENST00000554486 CRYZL1O95825 349 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 MOSP00540 346 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 IGKV1D-33P01593 117 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 IGKV1-33P01594 117 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 HLA-AP01891 365 aaKnown RBP4.99□□□□□ -1.61
SCFD1-212ENST00000554486 RRASP10301 218 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 SRD5A1P18405 259 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 CNTFRP26992 372 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 MC5RP33032 325 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 LPAR6P43657 344 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 EBI3Q14213 229 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 AANATQ16613 207 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 TATDN3Q17R31 274 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 RTL8BQ17RB0 113 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 DHRS7BQ6IAN0 325 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-212ENST00000554486 SELENOHQ8IZQ5 122 aaKnown RBP4.99□□□□□ -1.61
SCFD1-212ENST00000554486 CADM3Q8N126 398 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 SIGLECL1Q8N7X8 197 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 Q8N9P0 234 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-212ENST00000554486 OR4S2Q8NH73 311 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 CD300LFQ8TDQ1 290 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 ZNF431Q8TF32 576 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-212ENST00000554486 CASTOR1Q8WTX7 329 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 MITD1Q8WV92 249 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 URB1-AS1Q96HZ7 61 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 TMEM56Q96MV1 263 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 KCNIP3Q9Y2W7 256 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 ALG5Q9Y673 324 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 TMEM56-RWDD3S4R434 201 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 A0A0G2JRQ6 117 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 A6NDX4 124 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 SNRPGP15A8MWD9 76 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 SLC25A17O43808 307 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 CDS2O95674 445 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 DHFRP00374 187 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 HPRT1P00492 218 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 IGKV1-5P01602 117 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 IGLV2-23P01705 113 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 IGHV4-59P01825 116 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 IGKV2-30P06310 120 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 SERPINE2P07093 398 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 P0C879 139 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 FAM106CPP0CH98 169 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 PSG1P11464 419 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 RPA2P15927 270 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 BRS3P32247 399 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 IER3P46695 156 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 ARHGDIBP52566 201 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 F2RL1P55085 397 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 HES1Q14469 280 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 HNF4GQ14541 408 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 POU2AF1Q16633 256 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 IZUMO4Q1ZYL8 232 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 C2orf68Q2NKX9 166 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 C11orf88Q6PI97 169 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 TMEM219Q86XT9 240 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 VKORC1L1Q8N0U8 176 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 LGI3Q8N145 548 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 LRTM2Q8N967 370 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 OR4C13Q8NGP0 309 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 OR2T10Q8NGZ9 312 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 RBPMSQ93062 196 aaKnown RBP4.98□□□□□ -1.61
SCFD1-212ENST00000554486 IL22RA2Q969J5 263 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 FLYWCH2Q96CP2 140 aaKnown RBP4.98□□□□□ -1.61
SCFD1-212ENST00000554486 SEC22AQ96IW7 307 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 HARBI1Q96MB7 349 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 OR51J1Q9H342 316 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 ESM1Q9NQ30 184 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 PLSCR3Q9NRY6 295 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 COMMD9Q9P000 198 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 TCF19Q9Y242 345 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 JMJD1CQ15652 2540 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 CUBNO60494 3623 aa4.98□□□□□ -1.61
SCFD1-212ENST00000554486 A0A0B4J2A0 478 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 A0A1B0GVG6 124 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 GAGE12JA6NER3 117 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 CHST1O43916 411 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 CREBL2O60519 120 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-212ENST00000554486 CRLF1O75462 422 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 NDUFA3O95167 84 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 TOMM40O96008 361 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 KRASP01116 189 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 CRYGBP07316 175 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 FAM157CP0CG43 387 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 SAA1P0DJI8 122 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-212ENST00000554486 ANXA3P12429 323 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 NQO2P16083 231 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 TMEM11P17152 192 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 G6PCP35575 357 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 LGALS7P47929 136 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 SRPXP78539 464 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 CBX3Q13185 183 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 PSG5Q15238 335 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 LY6EQ16553 131 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 MRGPRG-AS1Q2M3A8 158 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 NMSQ5H8A3 153 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 SSX9Q7RTT3 188 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 LYZL2Q7Z4W2 148 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 ZNF695Q8IW36 515 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms