RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 SDF2L1Q9HCN8 221 aa9.61□□□□□ -0.87
SHMT2-212ENST00000554467 KBTBD11-OT1A0A1B0GTJ5 212 aa9.61□□□□□ -0.87
SHMT2-212ENST00000554467 CHRNB4P30926 498 aa9.61□□□□□ -0.87
SHMT2-212ENST00000554467 DUTP33316 252 aaKnown RBP9.61□□□□□ -0.87
SHMT2-212ENST00000554467 DLX1P56177 255 aa9.61□□□□□ -0.87
SHMT2-212ENST00000554467 IQCJQ1A5X6 159 aa9.61□□□□□ -0.87
SHMT2-212ENST00000554467 LYG1Q8N1E2 194 aa9.61□□□□□ -0.87
SHMT2-212ENST00000554467 ST6GALNAC3Q8NDV1 305 aa9.61□□□□□ -0.87
SHMT2-212ENST00000554467 RBKSQ9H477 322 aa9.61□□□□□ -0.87
SHMT2-212ENST00000554467 SLC25A10Q9UBX3 287 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-212ENST00000554467 ARHGAP32A7KAX9 2087 aa9.61□□□□□ -0.87
SHMT2-212ENST00000554467 LOC102723971A0A1B0GUV8 181 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 SCGB1D1O95968 90 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 HPRT1P00492 218 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 SAPCD1Q5SSQ6 148 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 MRPL41Q8IXM3 137 aaKnown RBP9.6□□□□□ -0.87
SHMT2-212ENST00000554467 Q8TCH9 128 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 PYGO2Q9BRQ0 406 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 TMEM106BQ9NUM4 274 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 JPT1Q9UK76 154 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 PPIAL4AQ9Y536 164 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 UBE2L5PA0A1B0GUS4 154 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 TMEM178BH3BS89 294 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 TLE4Q04727 773 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 H2BFWTQ7Z2G1 175 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 TMEM37Q8WXS4 190 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 SPG11Q96JI7 2443 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 PPIAL4EA0A075B759 164 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 SAA2-SAA4A0A096LPE2 208 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 CEBPZOSA8MTT3 80 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 PPIAL4DF5H284 164 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 F2RL2O00254 374 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 SAA2P0DJI9 122 aaPredicted RBP9.6□□□□□ -0.87
SHMT2-212ENST00000554467 PPIAL4FP0DN26 164 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 CGB3P0DN86 165 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 CGB7P0DN87 165 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 TRAT1Q6PIZ9 186 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 HAPLN4Q86UW8 402 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 ATP5SQ99766 215 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 ELOVL1Q9BW60 279 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 FKBP11Q9NYL4 201 aa9.6□□□□□ -0.87
SHMT2-212ENST00000554467 TRAV3A0A0B4J244 114 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 YPEL1O60688 119 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 ZG16O60844 167 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 OPN1MWP04001 364 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 OPN1MW2P0DN77 364 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 OPN1MW3P0DN78 364 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 OR5I1Q13606 314 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 ZNF787Q6DD87 383 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 ZBTB34Q8NCN2 500 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 GNPNAT1Q96EK6 184 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-212ENST00000554467 YPEL2Q96QA6 119 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 SPOCK3Q9BQ16 436 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 RPRMQ9NS64 109 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 M0QZK8 103 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 GGCTO75223 188 aaKnown RBP9.59□□□□□ -0.87
SHMT2-212ENST00000554467 OR9G9P0C7N8 305 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 DEFA4P12838 97 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 RPL31P62899 125 aaKnown RBP9.59□□□□□ -0.87
SHMT2-212ENST00000554467 TEX36Q5VZQ5 186 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 GBGT1Q8N5D6 347 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 HSD17B10Q99714 261 aaKnown RBP9.59□□□□□ -0.87
SHMT2-212ENST00000554467 USP9XQ93008 2570 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-212ENST00000554467 WNK2Q9Y3S1 2297 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 SSX7Q7RTT5 188 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 RAB40CQ96S21 281 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 PCGF1Q9BSM1 259 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 QTRT1Q9BXR0 403 aaKnown RBP9.59□□□□□ -0.87
SHMT2-212ENST00000554467 DNAJC4Q9NNZ3 241 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 CTSZQ9UBR2 303 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 LAMP3Q9UQV4 416 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 FUT9Q9Y231 359 aa9.59□□□□□ -0.87
SHMT2-212ENST00000554467 CELSR1Q9NYQ6 3014 aa9.58□□□□□ -0.88
SHMT2-212ENST00000554467 TRAV38-1A0A0B4J264 116 aa9.58□□□□□ -0.88
SHMT2-212ENST00000554467 NKX6-3A6NJ46 265 aa9.58□□□□□ -0.88
SHMT2-212ENST00000554467 VSTM5A8MXK1 200 aa9.58□□□□□ -0.88
SHMT2-212ENST00000554467 APOBEC3AP31941 199 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-212ENST00000554467 UQCRFS1P47985 274 aa9.58□□□□□ -0.88
SHMT2-212ENST00000554467 REG1BP48304 166 aa9.58□□□□□ -0.88
SHMT2-212ENST00000554467 C16orf82Q7Z2V1 217 aa9.58□□□□□ -0.88
SHMT2-212ENST00000554467 TMEM256Q8N2U0 113 aa9.58□□□□□ -0.88
SHMT2-212ENST00000554467 MUC15Q8N387 334 aa9.58□□□□□ -0.88
SHMT2-212ENST00000554467 OR10G4Q8NGN3 311 aa9.58□□□□□ -0.88
SHMT2-212ENST00000554467 TMEM170AQ8WVE7 144 aa9.58□□□□□ -0.88
SHMT2-212ENST00000554467 TMEM18Q96B42 140 aa9.58□□□□□ -0.88
SHMT2-212ENST00000554467 NAGKQ9UJ70 344 aa9.58□□□□□ -0.88
SHMT2-212ENST00000554467 USP24Q9UPU5 2620 aa9.58□□□□□ -0.88
SHMT2-212ENST00000554467 TET2Q6N021 2002 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-212ENST00000554467 EPG5Q9HCE0 2579 aa9.58□□□□□ -0.88
SHMT2-212ENST00000554467 WNT2P09544 360 aa9.58□□□□□ -0.88
SHMT2-212ENST00000554467 SLC25A6P12236 298 aa9.58□□□□□ -0.88
SHMT2-212ENST00000554467 CR1LQ2VPA4 569 aa9.58□□□□□ -0.88
SHMT2-212ENST00000554467 OR51G1Q8NGK1 321 aa9.58□□□□□ -0.88
SHMT2-212ENST00000554467 PLXNB1O43157 2135 aa9.58□□□□□ -0.88
SHMT2-212ENST00000554467 CCL25O15444 150 aa9.57□□□□□ -0.88
SHMT2-212ENST00000554467 MYOD1P15172 320 aa9.57□□□□□ -0.88
SHMT2-212ENST00000554467 COL8A2P25067 703 aa9.57□□□□□ -0.88
SHMT2-212ENST00000554467 BATFQ16520 125 aa9.57□□□□□ -0.88
SHMT2-212ENST00000554467 IDI2-AS1Q9NZ38 188 aa9.57□□□□□ -0.88
SHMT2-212ENST00000554467 CELSR2Q9HCU4 2923 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms