RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 CRYZL1O95825 349 aa12.85□□□□□ -0.35
NEK9-204ENST00000554258 UCP1P25874 307 aa12.85□□□□□ -0.35
NEK9-204ENST00000554258 RPS16P62249 146 aaKnown RBP12.85□□□□□ -0.35
NEK9-204ENST00000554258 CBX3Q13185 183 aa12.85□□□□□ -0.35
NEK9-204ENST00000554258 OR2B11Q5JQS5 317 aa12.85□□□□□ -0.35
NEK9-204ENST00000554258 TMEM65Q6PI78 240 aa12.85□□□□□ -0.35
NEK9-204ENST00000554258 CENPSQ8N2Z9 138 aa12.85□□□□□ -0.35
NEK9-204ENST00000554258 GLYATL2Q8WU03 294 aa12.85□□□□□ -0.35
NEK9-204ENST00000554258 TP53RKQ96S44 253 aa12.85□□□□□ -0.35
NEK9-204ENST00000554258 TSNAXQ99598 290 aaKnown RBP12.85□□□□□ -0.35
NEK9-204ENST00000554258 NUBP2Q9Y5Y2 271 aa12.85□□□□□ -0.35
NEK9-204ENST00000554258 TEX13DA0A0J9YY54 714 aaPredicted RBP12.84□□□□□ -0.35
NEK9-204ENST00000554258 IGKV1-39P01597 117 aa12.84□□□□□ -0.35
NEK9-204ENST00000554258 IGKV1D-39P04432 117 aa12.84□□□□□ -0.35
NEK9-204ENST00000554258 IL6RP08887 468 aaPredicted RBP12.84□□□□□ -0.35
NEK9-204ENST00000554258 RPA2P15927 270 aa12.84□□□□□ -0.35
NEK9-204ENST00000554258 LPAR6P43657 344 aa12.84□□□□□ -0.35
NEK9-204ENST00000554258 TAS2R31P59538 309 aa12.84□□□□□ -0.35
NEK9-204ENST00000554258 PSG5Q15238 335 aa12.84□□□□□ -0.35
NEK9-204ENST00000554258 ZNF491Q8N8L2 437 aa12.84□□□□□ -0.35
NEK9-204ENST00000554258 C20orf85Q9H1P6 137 aa12.84□□□□□ -0.35
NEK9-204ENST00000554258 COMMD9Q9P000 198 aa12.84□□□□□ -0.35
NEK9-204ENST00000554258 KCNIP3Q9Y2W7 256 aa12.84□□□□□ -0.35
NEK9-204ENST00000554258 A0A1B0GVY2 172 aa12.83□□□□□ -0.36
NEK9-204ENST00000554258 NCBP2LA6PVI3 153 aaKnown RBP12.83□□□□□ -0.36
NEK9-204ENST00000554258 RRHO14718 337 aa12.83□□□□□ -0.36
NEK9-204ENST00000554258 ARPC1BO15143 372 aaKnown RBP12.83□□□□□ -0.36
NEK9-204ENST00000554258 SHOXO15266 292 aa12.83□□□□□ -0.36
NEK9-204ENST00000554258 NBR2O15453 112 aa12.83□□□□□ -0.36
NEK9-204ENST00000554258 CDS2O95674 445 aa12.83□□□□□ -0.36
NEK9-204ENST00000554258 HRASP01112 189 aa12.83□□□□□ -0.36
NEK9-204ENST00000554258 AKR1C4P17516 323 aa12.83□□□□□ -0.36
NEK9-204ENST00000554258 UBE2KP61086 200 aa12.83□□□□□ -0.36
NEK9-204ENST00000554258 TMEM187Q14656 261 aa12.83□□□□□ -0.36
NEK9-204ENST00000554258 C5orf64Q2M2E5 130 aa12.83□□□□□ -0.36
NEK9-204ENST00000554258 SP6Q3SY56 376 aa12.83□□□□□ -0.36
NEK9-204ENST00000554258 LINC00336Q6ZUF6 198 aa12.83□□□□□ -0.36
NEK9-204ENST00000554258 TMED4Q7Z7H5 227 aa12.83□□□□□ -0.36
NEK9-204ENST00000554258 GTSCR1Q86UQ5 136 aa12.83□□□□□ -0.36
NEK9-204ENST00000554258 TEX45Q8NA69 505 aa12.83□□□□□ -0.36
NEK9-204ENST00000554258 ENKURQ8TC29 256 aa12.83□□□□□ -0.36
NEK9-204ENST00000554258 HARBI1Q96MB7 349 aa12.83□□□□□ -0.36
NEK9-204ENST00000554258 TMEM56Q96MV1 263 aa12.83□□□□□ -0.36
NEK9-204ENST00000554258 AIFM2Q9BRQ8 373 aa12.83□□□□□ -0.36
NEK9-204ENST00000554258 TMEM222Q9H0R3 208 aa12.83□□□□□ -0.36
NEK9-204ENST00000554258 KLK15Q9H2R5 256 aa12.83□□□□□ -0.36
NEK9-204ENST00000554258 TMEM56-RWDD3S4R434 201 aa12.83□□□□□ -0.36
NEK9-204ENST00000554258 DNAH17Q9UFH2 4485 aa12.83□□□□□ -0.36
NEK9-204ENST00000554258 LINC01619G3V211 115 aa12.82□□□□□ -0.36
NEK9-204ENST00000554258 S1PR2O95136 353 aa12.82□□□□□ -0.36
NEK9-204ENST00000554258 PTTG1O95997 202 aa12.82□□□□□ -0.36
NEK9-204ENST00000554258 IGLV1-51P01701 117 aa12.82□□□□□ -0.36
NEK9-204ENST00000554258 H2AFB2P0C5Z0 115 aa12.82□□□□□ -0.36
NEK9-204ENST00000554258 OR5AC1P0C628 307 aa12.82□□□□□ -0.36
NEK9-204ENST00000554258 NQO2P16083 231 aa12.82□□□□□ -0.36
NEK9-204ENST00000554258 KIAA0141Q14154 515 aaPredicted RBP12.82□□□□□ -0.36
NEK9-204ENST00000554258 MMDQ15546 238 aa12.82□□□□□ -0.36
NEK9-204ENST00000554258 MRGPRG-AS1Q2M3A8 158 aa12.82□□□□□ -0.36
NEK9-204ENST00000554258 PUSL1Q8N0Z8 303 aaKnown RBP12.82□□□□□ -0.36
NEK9-204ENST00000554258 MARVELD1Q9BSK0 173 aa12.82□□□□□ -0.36
NEK9-204ENST00000554258 NUDT15Q9NV35 164 aa12.82□□□□□ -0.36
NEK9-204ENST00000554258 SFT2D2O95562 160 aa12.81□□□□□ -0.36
NEK9-204ENST00000554258 SERPINE2P07093 398 aa12.81□□□□□ -0.36
NEK9-204ENST00000554258 P0C879 139 aa12.81□□□□□ -0.36
NEK9-204ENST00000554258 ANXA7P20073 488 aaKnown RBP12.81□□□□□ -0.36
NEK9-204ENST00000554258 PPP1R1AQ13522 171 aa12.81□□□□□ -0.36
NEK9-204ENST00000554258 IL22RA2Q969J5 263 aa12.81□□□□□ -0.36
NEK9-204ENST00000554258 SEC22AQ96IW7 307 aa12.81□□□□□ -0.36
NEK9-204ENST00000554258 RHOVQ96L33 236 aa12.81□□□□□ -0.36
NEK9-204ENST00000554258 ELOVL1Q9BW60 279 aa12.81□□□□□ -0.36
NEK9-204ENST00000554258 TRAV6A0A075B6T7 132 aa12.8□□□□□ -0.36
NEK9-204ENST00000554258 C9orf170A2RU37 121 aa12.8□□□□□ -0.36
NEK9-204ENST00000554258 HLA-DRB1P01911 266 aa12.8□□□□□ -0.36
NEK9-204ENST00000554258 IL5P05113 134 aa12.8□□□□□ -0.36
NEK9-204ENST00000554258 OR4E1P0C645 316 aa12.8□□□□□ -0.36
NEK9-204ENST00000554258 SAA1P0DJI8 122 aaPredicted RBP12.8□□□□□ -0.36
NEK9-204ENST00000554258 VMA21Q3ZAQ7 101 aa12.8□□□□□ -0.36
NEK9-204ENST00000554258 PLET1Q6UQ28 207 aa12.8□□□□□ -0.36
NEK9-204ENST00000554258 LINC00322Q6ZN03 302 aaPredicted RBP12.8□□□□□ -0.36
NEK9-204ENST00000554258 SELENOHQ8IZQ5 122 aaKnown RBP12.8□□□□□ -0.36
NEK9-204ENST00000554258 LRTM2Q8N967 370 aa12.8□□□□□ -0.36
NEK9-204ENST00000554258 LHFPL5Q8TAF8 219 aa12.8□□□□□ -0.36
NEK9-204ENST00000554258 TMEM167AQ8TBQ9 72 aa12.8□□□□□ -0.36
NEK9-204ENST00000554258 FBXL15Q9H469 300 aa12.8□□□□□ -0.36
NEK9-204ENST00000554258 BET1LQ9NYM9 111 aa12.8□□□□□ -0.36
NEK9-204ENST00000554258 SIGLEC8Q9NYZ4 499 aa12.8□□□□□ -0.36
NEK9-204ENST00000554258 METTL1Q9UBP6 276 aaKnown RBP12.8□□□□□ -0.36
NEK9-204ENST00000554258 PKD1P98161 4303 aa12.8□□□□□ -0.36
NEK9-204ENST00000554258 FCN1O00602 326 aa12.79□□□□□ -0.36
NEK9-204ENST00000554258 OR2A4O95047 310 aa12.79□□□□□ -0.36
NEK9-204ENST00000554258 CNIH1O95406 144 aa12.79□□□□□ -0.36
NEK9-204ENST00000554258 FGF2P09038 288 aa12.79□□□□□ -0.36
NEK9-204ENST00000554258 ANXA3P12429 323 aa12.79□□□□□ -0.36
NEK9-204ENST00000554258 LIN54Q6MZP7 749 aa12.79□□□□□ -0.36
NEK9-204ENST00000554258 LYG2Q86SG7 212 aa12.79□□□□□ -0.36
NEK9-204ENST00000554258 PPP1R27Q86WC6 154 aa12.79□□□□□ -0.36
NEK9-204ENST00000554258 VKORC1L1Q8N0U8 176 aa12.79□□□□□ -0.36
NEK9-204ENST00000554258 VSTM2AQ8TAG5 236 aa12.79□□□□□ -0.36
NEK9-204ENST00000554258 OR2A7Q96R45 310 aa12.79□□□□□ -0.36
NEK9-204ENST00000554258 RASL11BQ9BPW5 248 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms