RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 PSG11Q9UQ72 335 aa6.96□□□□□ -1.3
TDP1-208ENST00000553989 KMT2CQ8NEZ4 4911 aaKnown RBP6.96□□□□□ -1.3
TDP1-208ENST00000553989 DNAH3Q8TD57 4116 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 IGHV3-72A0A0B4J1Y9 119 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 A0A1B0GW64 132 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 FAM90A9PA6NNJ1 464 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 AP4M1O00189 453 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 CDS2O95674 445 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 LY86O95711 162 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 CD5P06127 495 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 FCGR3AP08637 254 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 PI3P19957 117 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 S100GP29377 79 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 SSTR5P35346 364 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 REG1BP48304 166 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 HOXA1P49639 335 aaPredicted RBP6.95□□□□□ -1.3
TDP1-208ENST00000553989 PIGPP57054 158 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 S100A10P60903 97 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 HERV-K104P61576 105 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 RND3P61587 244 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 C9orf66Q5T8R8 295 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 ATRAIDQ6UW56 229 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 LCNL1Q6ZST4 164 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 LFNGQ8NES3 379 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 RTN4IP1Q8WWV3 396 aaPredicted RBP6.95□□□□□ -1.3
TDP1-208ENST00000553989 MOB3AQ96BX8 217 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 RAX2Q96IS3 184 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 ASCL2Q99929 193 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 PBDC1Q9BVG4 233 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 SLC25A31Q9H0C2 315 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 TUBA4BQ9H853 241 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 SPACA1Q9HBV2 294 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 OR2S2Q9NQN1 319 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 BIN3Q9NQY0 253 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 SMCO4Q9NRQ5 59 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 RCC2Q9P258 522 aaKnown RBP6.95□□□□□ -1.3
TDP1-208ENST00000553989 MLXQ9UH92 298 aa6.95□□□□□ -1.3
TDP1-208ENST00000553989 TRAV39A0A0B4J263 110 aa6.94□□□□□ -1.3
TDP1-208ENST00000553989 SEC14L6B5MCN3 397 aa6.94□□□□□ -1.3
TDP1-208ENST00000553989 HSPA12AO43301 675 aa6.94□□□□□ -1.3
TDP1-208ENST00000553989 MED6O75586 246 aa6.94□□□□□ -1.3
TDP1-208ENST00000553989 IGHG2P01859 326 aa6.94□□□□□ -1.3
TDP1-208ENST00000553989 VDAC1P21796 283 aa6.94□□□□□ -1.3
TDP1-208ENST00000553989 IL3RAP26951 378 aa6.94□□□□□ -1.3
TDP1-208ENST00000553989 GPR12P47775 334 aa6.94□□□□□ -1.3
TDP1-208ENST00000553989 KIR2DS1Q14954 304 aa6.94□□□□□ -1.3
TDP1-208ENST00000553989 C21orf62-AS1Q17RA5 79 aa6.94□□□□□ -1.3
TDP1-208ENST00000553989 PIGYQ3MUY2 71 aa6.94□□□□□ -1.3
TDP1-208ENST00000553989 ANKRD39Q53RE8 183 aa6.94□□□□□ -1.3
TDP1-208ENST00000553989 TMEM268Q5VZI3 342 aa6.94□□□□□ -1.3
TDP1-208ENST00000553989 RPL7L1Q6DKI1 246 aaKnown RBP6.94□□□□□ -1.3
TDP1-208ENST00000553989 LINC00596Q86U02 117 aa6.94□□□□□ -1.3
TDP1-208ENST00000553989 NEK7Q8TDX7 302 aa6.94□□□□□ -1.3
TDP1-208ENST00000553989 RASL11BQ9BPW5 248 aa6.94□□□□□ -1.3
TDP1-208ENST00000553989 GINS3Q9BRX5 216 aa6.94□□□□□ -1.3
TDP1-208ENST00000553989 HRH4Q9H3N8 390 aa6.94□□□□□ -1.3
TDP1-208ENST00000553989 LIN7CQ9NUP9 197 aaKnown RBP6.94□□□□□ -1.3
TDP1-208ENST00000553989 ST3GAL6Q9Y274 331 aa6.94□□□□□ -1.3
TDP1-208ENST00000553989 PRELID3BQ9Y3B1 194 aa6.94□□□□□ -1.3
TDP1-208ENST00000553989 TRAV24A0A0B4J272 114 aa6.93□□□□□ -1.3
TDP1-208ENST00000553989 IGHV1-3A0A0C4DH29 117 aa6.93□□□□□ -1.3
TDP1-208ENST00000553989 MSGN1A6NI15 193 aa6.93□□□□□ -1.3
TDP1-208ENST00000553989 LINC01548A6NM66 108 aa6.93□□□□□ -1.3
TDP1-208ENST00000553989 UMAD1C9J7I0 102 aa6.93□□□□□ -1.3
TDP1-208ENST00000553989 MPPED1O15442 326 aa6.93□□□□□ -1.3
TDP1-208ENST00000553989 NUPL2O15504 423 aaKnown RBP6.93□□□□□ -1.3
TDP1-208ENST00000553989 OR7C1O76099 320 aaPredicted RBP6.93□□□□□ -1.3
TDP1-208ENST00000553989 KCNJ3P48549 501 aa6.93□□□□□ -1.3
TDP1-208ENST00000553989 MPV17LQ2QL34 196 aa6.93□□□□□ -1.3
TDP1-208ENST00000553989 RNF212Q495C1 297 aa6.93□□□□□ -1.3
TDP1-208ENST00000553989 TGIF2LXQ8IUE1 241 aa6.93□□□□□ -1.3
TDP1-208ENST00000553989 PUSL1Q8N0Z8 303 aaKnown RBP6.93□□□□□ -1.3
TDP1-208ENST00000553989 OR10A7Q8NGE5 316 aa6.93□□□□□ -1.3
TDP1-208ENST00000553989 OR2T10Q8NGZ9 312 aa6.93□□□□□ -1.3
TDP1-208ENST00000553989 PLPPR1Q8TBJ4 325 aa6.93□□□□□ -1.3
TDP1-208ENST00000553989 IL22RA2Q969J5 263 aa6.93□□□□□ -1.3
TDP1-208ENST00000553989 TMEM56Q96MV1 263 aa6.93□□□□□ -1.3
TDP1-208ENST00000553989 SULT4A1Q9BR01 284 aa6.93□□□□□ -1.3
TDP1-208ENST00000553989 LSM5Q9Y4Y9 91 aaKnown RBP6.93□□□□□ -1.3
TDP1-208ENST00000553989 TMEM56-RWDD3S4R434 201 aa6.93□□□□□ -1.3
TDP1-208ENST00000553989 IGKV1D-8A0A087WSZ0 117 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 TRBV6-6A0A0A6YYG2 114 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 IGHV3-43A0A0B4J1X8 118 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 C3orf85A0A1B0GTC6 90 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 TMEM30CPA0ZSE6 113 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 FAM74A7A6NL05 159 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 TRDCB7Z8K6 153 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 NPIPB11E5RHQ5 1161 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 C3orf84H3BNL1 204 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 GPR31O00270 319 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 GEMIN2O14893 280 aaKnown RBP6.92□□□□□ -1.3
TDP1-208ENST00000553989 MOSP00540 346 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 MBPP02686 304 aaPredicted RBP6.92□□□□□ -1.3
TDP1-208ENST00000553989 IFNA4P05014 189 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 ELANEP08246 267 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 CGB3P0DN86 165 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 CGB7P0DN87 165 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 IGHV3-43DP0DP04 118 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 SPP1P10451 314 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 FOLR2P14207 255 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms