RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 SLC25A6P12236 298 aa9.6□□□□□ -0.87
SHMT2-209ENST00000553949 PPIFP30405 207 aaKnown RBP9.6□□□□□ -0.87
SHMT2-209ENST00000553949 THOC7Q6I9Y2 204 aaKnown RBP9.6□□□□□ -0.87
SHMT2-209ENST00000553949 C10orf99Q6UWK7 81 aa9.6□□□□□ -0.87
SHMT2-209ENST00000553949 MINDY2Q8NBR6 621 aa9.6□□□□□ -0.87
SHMT2-209ENST00000553949 WFDC12Q8WWY7 111 aa9.6□□□□□ -0.87
SHMT2-209ENST00000553949 SRSF8Q9BRL6 282 aaKnown RBP9.6□□□□□ -0.87
SHMT2-209ENST00000553949 PDCD10Q9BUL8 212 aa9.6□□□□□ -0.87
SHMT2-209ENST00000553949 HINT2Q9BX68 163 aa9.6□□□□□ -0.87
SHMT2-209ENST00000553949 A0A1W2PN81 502 aa9.59□□□□□ -0.87
SHMT2-209ENST00000553949 IGLC7A0M8Q6 106 aa9.59□□□□□ -0.87
SHMT2-209ENST00000553949 MPTX1A8MV57 137 aa9.59□□□□□ -0.87
SHMT2-209ENST00000553949 PITX3O75364 302 aa9.59□□□□□ -0.87
SHMT2-209ENST00000553949 IFNA17P01571 189 aa9.59□□□□□ -0.87
SHMT2-209ENST00000553949 AREGP15514 252 aa9.59□□□□□ -0.87
SHMT2-209ENST00000553949 CHRNA7P36544 502 aa9.59□□□□□ -0.87
SHMT2-209ENST00000553949 PRCDQ00LT1 54 aa9.59□□□□□ -0.87
SHMT2-209ENST00000553949 KRTAP21-3Q3LHN1 58 aa9.59□□□□□ -0.87
SHMT2-209ENST00000553949 OR5T1Q8NG75 326 aa9.59□□□□□ -0.87
SHMT2-209ENST00000553949 OR5AU1Q8NGC0 362 aa9.59□□□□□ -0.87
SHMT2-209ENST00000553949 OR10W1Q8NGF6 305 aa9.59□□□□□ -0.87
SHMT2-209ENST00000553949 OR5M8Q8NGP6 311 aa9.59□□□□□ -0.87
SHMT2-209ENST00000553949 OR52E5Q8NH55 327 aa9.59□□□□□ -0.87
SHMT2-209ENST00000553949 OR1S1Q8NH92 325 aa9.59□□□□□ -0.87
SHMT2-209ENST00000553949 CACFD1Q9UGQ2 172 aa9.59□□□□□ -0.87
SHMT2-209ENST00000553949 ALG5Q9Y673 324 aa9.59□□□□□ -0.87
SHMT2-209ENST00000553949 CCSO14618 274 aa9.58□□□□□ -0.88
SHMT2-209ENST00000553949 SSNA1O43805 119 aa9.58□□□□□ -0.88
SHMT2-209ENST00000553949 SOX15O60248 233 aa9.58□□□□□ -0.88
SHMT2-209ENST00000553949 NXPH3O95157 252 aa9.58□□□□□ -0.88
SHMT2-209ENST00000553949 IGLV1-40P01703 118 aa9.58□□□□□ -0.88
SHMT2-209ENST00000553949 IGHG4P01861 327 aa9.58□□□□□ -0.88
SHMT2-209ENST00000553949 KRTAP10-3P60369 221 aa9.58□□□□□ -0.88
SHMT2-209ENST00000553949 SPCS3P61009 180 aa9.58□□□□□ -0.88
SHMT2-209ENST00000553949 WT1-ASQ06250 92 aa9.58□□□□□ -0.88
SHMT2-209ENST00000553949 PDLIM3Q53GG5 364 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-209ENST00000553949 SPINK9Q5DT21 86 aa9.58□□□□□ -0.88
SHMT2-209ENST00000553949 TEX38Q6PEX7 206 aa9.58□□□□□ -0.88
SHMT2-209ENST00000553949 C12orf54Q6X4T0 127 aa9.58□□□□□ -0.88
SHMT2-209ENST00000553949 HSD17B13Q7Z5P4 300 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-209ENST00000553949 TTC9CQ8N5M4 171 aa9.58□□□□□ -0.88
SHMT2-209ENST00000553949 COMMD1Q8N668 190 aa9.58□□□□□ -0.88
SHMT2-209ENST00000553949 OR4X2Q8NGF9 303 aa9.58□□□□□ -0.88
SHMT2-209ENST00000553949 FAM110DQ8TAY7 271 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-209ENST00000553949 OR10C1Q96KK4 312 aa9.58□□□□□ -0.88
SHMT2-209ENST00000553949 PLEKHA3Q9HB20 300 aa9.58□□□□□ -0.88
SHMT2-209ENST00000553949 PLXNB1O43157 2135 aa9.58□□□□□ -0.88
SHMT2-209ENST00000553949 TNCP24821 2201 aa9.58□□□□□ -0.88
SHMT2-209ENST00000553949 C13orf42A0A1B0GVH6 325 aa9.57□□□□□ -0.88
SHMT2-209ENST00000553949 NPIPB5A8MRT5 1133 aa9.57□□□□□ -0.88
SHMT2-209ENST00000553949 FAM25EA8MYX2 175 aa9.57□□□□□ -0.88
SHMT2-209ENST00000553949 FBXO24O75426 580 aa9.57□□□□□ -0.88
SHMT2-209ENST00000553949 REG1AP05451 166 aa9.57□□□□□ -0.88
SHMT2-209ENST00000553949 CRYGCP07315 174 aa9.57□□□□□ -0.88
SHMT2-209ENST00000553949 OR13C7P0DN81 318 aa9.57□□□□□ -0.88
SHMT2-209ENST00000553949 CD28P10747 220 aa9.57□□□□□ -0.88
SHMT2-209ENST00000553949 PSMB6P28072 239 aa9.57□□□□□ -0.88
SHMT2-209ENST00000553949 TNFRSF9Q07011 255 aa9.57□□□□□ -0.88
SHMT2-209ENST00000553949 SRSF4Q08170 494 aaKnown RBP9.57□□□□□ -0.88
SHMT2-209ENST00000553949 FOXE3Q13461 319 aa9.57□□□□□ -0.88
SHMT2-209ENST00000553949 C2orf68Q2NKX9 166 aa9.57□□□□□ -0.88
SHMT2-209ENST00000553949 IAH1Q2TAA2 248 aaPredicted RBP9.57□□□□□ -0.88
SHMT2-209ENST00000553949 TCTEX1D4Q5JR98 221 aa9.57□□□□□ -0.88
SHMT2-209ENST00000553949 MRPL41Q8IXM3 137 aaKnown RBP9.57□□□□□ -0.88
SHMT2-209ENST00000553949 C11orf44Q8N8P7 122 aa9.57□□□□□ -0.88
SHMT2-209ENST00000553949 HSPB7Q9UBY9 170 aa9.57□□□□□ -0.88
SHMT2-209ENST00000553949 C5orf51A6NDU8 294 aa9.56□□□□□ -0.88
SHMT2-209ENST00000553949 FAM90A26D6RGX4 464 aa9.56□□□□□ -0.88
SHMT2-209ENST00000553949 GOSR2O14653 212 aa9.56□□□□□ -0.88
SHMT2-209ENST00000553949 ELANEP08246 267 aa9.56□□□□□ -0.88
SHMT2-209ENST00000553949 PF4V1P10720 104 aa9.56□□□□□ -0.88
SHMT2-209ENST00000553949 CTRB1P17538 263 aa9.56□□□□□ -0.88
SHMT2-209ENST00000553949 PSMB8P28062 276 aa9.56□□□□□ -0.88
SHMT2-209ENST00000553949 HOXA1P49639 335 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-209ENST00000553949 CXorf66Q5JRM2 361 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-209ENST00000553949 CTRB2Q6GPI1 263 aa9.56□□□□□ -0.88
SHMT2-209ENST00000553949 C19orf35Q6ZS72 473 aa9.56□□□□□ -0.88
SHMT2-209ENST00000553949 LCNL1Q6ZST4 164 aa9.56□□□□□ -0.88
SHMT2-209ENST00000553949 OR2C3Q8N628 320 aa9.56□□□□□ -0.88
SHMT2-209ENST00000553949 C3orf56Q8N813 242 aa9.56□□□□□ -0.88
SHMT2-209ENST00000553949 RNF152Q8N8N0 203 aa9.56□□□□□ -0.88
SHMT2-209ENST00000553949 ZBTB8BQ8NAP8 495 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-209ENST00000553949 ZNF747Q9BV97 191 aa9.56□□□□□ -0.88
SHMT2-209ENST00000553949 KLK15Q9H2R5 256 aa9.56□□□□□ -0.88
SHMT2-209ENST00000553949 ENY2Q9NPA8 101 aa9.56□□□□□ -0.88
SHMT2-209ENST00000553949 ZNF355PQ9NSJ1 428 aa9.56□□□□□ -0.88
SHMT2-209ENST00000553949 GSKIPQ9P0R6 139 aa9.56□□□□□ -0.88
SHMT2-209ENST00000553949 CEBPZOSA8MTT3 80 aa9.55□□□□□ -0.88
SHMT2-209ENST00000553949 INS-IGF2F8WCM5 200 aa9.55□□□□□ -0.88
SHMT2-209ENST00000553949 H3BUA1 57 aa9.55□□□□□ -0.88
SHMT2-209ENST00000553949 BRI3O95415 125 aa9.55□□□□□ -0.88
SHMT2-209ENST00000553949 PRH1P02810 166 aa9.55□□□□□ -0.88
SHMT2-209ENST00000553949 RAB9AP51151 201 aa9.55□□□□□ -0.88
SHMT2-209ENST00000553949 ERHP84090 104 aaKnown RBP9.55□□□□□ -0.88
SHMT2-209ENST00000553949 HIST2H2BDQ6DRA6 164 aa9.55□□□□□ -0.88
SHMT2-209ENST00000553949 TMEM65Q6PI78 240 aa9.55□□□□□ -0.88
SHMT2-209ENST00000553949 GSG1LQ6UXU4 331 aa9.55□□□□□ -0.88
SHMT2-209ENST00000553949 OR4D5Q8NGN0 318 aa9.55□□□□□ -0.88
SHMT2-209ENST00000553949 C2orf50Q96LR7 162 aa9.55□□□□□ -0.88
SHMT2-209ENST00000553949 MS4A10Q96PG2 267 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms