RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 CISD3P0C7P0 127 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 MUC1P15941 1255 aaPredicted RBP1.38□□□□□ -2.19
SRP54-204ENST00000553923 GZMHP20718 246 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 HLA-DMBP28068 263 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 G6PCP35575 357 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 CCR2P41597 374 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 LPAR6P43657 344 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 FXYD7P58549 80 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 AP1S1P61966 158 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 RBX1P62877 108 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 FKBP1AP62942 108 aaKnown RBP1.38□□□□□ -2.19
SRP54-204ENST00000553923 PSPHP78330 225 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 ZNF616Q08AN1 781 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 HTR4Q13639 388 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 TMEM78Q5T7P6 136 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 ZNF660Q6AZW8 331 aaPredicted RBP1.38□□□□□ -2.19
SRP54-204ENST00000553923 RPL22L1Q6P5R6 122 aaKnown RBP1.38□□□□□ -2.19
SRP54-204ENST00000553923 ZNF705AQ6ZN79 300 aaPredicted RBP1.38□□□□□ -2.19
SRP54-204ENST00000553923 CLVS1Q8IUQ0 354 aaPredicted RBP1.38□□□□□ -2.19
SRP54-204ENST00000553923 MSRB3Q8IXL7 192 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 IFT20Q8IY31 132 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 ZNF664Q8N3J9 261 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 CNEP1R1Q8N9A8 125 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 SPANXA2-OT1Q8N9U9 137 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 BPIFB6Q8NFQ5 453 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 OR5C1Q8NGR4 320 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 FNDC9Q8TBE3 224 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 ZNF675Q8TD23 568 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 CD200R1Q8TD46 325 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 C11orf40Q8WZ69 217 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 H1FXQ92522 213 aaKnown RBP1.38□□□□□ -2.19
SRP54-204ENST00000553923 FGF13Q92913 245 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 STARD4Q96DR4 205 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 TCEAL4Q96EI5 215 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 DNAJC30Q96LL9 226 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 PFDN5Q99471 154 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 GINS4Q9BRT9 223 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 DOHHQ9BU89 302 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 MND1Q9BWT6 205 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 SCRT1Q9BWW7 348 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 OR2J1Q9GZK6 312 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 CHST6Q9GZX3 395 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 CACYBPQ9HB71 228 aaKnown RBP1.38□□□□□ -2.19
SRP54-204ENST00000553923 SLC39A9Q9NUM3 307 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 TRAPPC2LQ9UL33 140 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 AMMECR1Q9Y4X0 333 aaPredicted RBP1.38□□□□□ -2.19
SRP54-204ENST00000553923 PTPRTO14522 1441 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 YTHDC2Q9H6S0 1430 aaKnown RBP1.38□□□□□ -2.19
SRP54-204ENST00000553923 LTBP1Q14766 1721 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 HMCN1Q96RW7 5635 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 A0A087WUU8 490 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 IGKV1D-43A0A0B4J1Z2 117 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 TRAV4A0A0B4J268 109 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 A0A1B0GW54 56 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 DHRS12A0PJE2 317 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 GRIFINA4D1Z8 144 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 C19orf71A6NCJ1 209 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 SIGLEC16A6NMB1 481 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 A8MUU9 505 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 K7EM74 188 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 M0QZK8 103 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 LEPROTO15243 131 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 CYB5BO43169 146 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 IGKV1-5P01602 117 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 IGHV3-53P01767 116 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 OGNP20774 298 aaKnown RBP1.37□□□□□ -2.19
SRP54-204ENST00000553923 CRHBPP24387 322 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 NFYBP25208 207 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 BLVRBP30043 206 aaPredicted RBP1.37□□□□□ -2.19
SRP54-204ENST00000553923 CMPK1P30085 196 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 SRIP30626 198 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 GTF2A1P52655 376 aaPredicted RBP1.37□□□□□ -2.19
SRP54-204ENST00000553923 CKS1BP61024 79 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 CCL20P78556 96 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 DHRS2Q13268 280 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 BIKQ13323 160 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 Q6P435 159 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 TMEM86AQ8N2M4 240 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 Q8N9L7 120 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 ST20-AS1Q8NBB2 130 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 APCDD1LQ8NCL9 501 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 OR10D4PQ8NGN7 298 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 OR9Q1Q8NGQ5 310 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 C2orf50Q96LR7 162 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 CCDC115Q96NT0 180 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 MIEN1Q9BRT3 115 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 DERL1Q9BUN8 251 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 IMUPQ9GZP8 106 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 PBOV1Q9GZY1 135 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 C11orf1Q9H5F2 150 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 SPANXA1Q9NS26 97 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 ASF1BQ9NVP2 202 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 NAT8Q9UHE5 227 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 KLK12Q9UKR0 248 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 PAIP2BQ9ULR5 123 aaKnown RBP1.37□□□□□ -2.19
SRP54-204ENST00000553923 YEATS2Q9ULM3 1422 aa1.37□□□□□ -2.19
SRP54-204ENST00000553923 BAZ1BQ9UIG0 1483 aaKnown RBP1.37□□□□□ -2.19
SRP54-204ENST00000553923 TONSLQ96HA7 1378 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 THSD7AQ9UPZ6 1657 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 LOC102725191A0A1B0GVB3 256 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms