RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 DRAM1Q8N682 238 aa10.16□□□□□ -0.78
SHMT2-207ENST00000553837 TAAR6Q96RI8 345 aa10.16□□□□□ -0.78
SHMT2-207ENST00000553837 DERL1Q9BUN8 251 aa10.16□□□□□ -0.78
SHMT2-207ENST00000553837 QTRT1Q9BXR0 403 aaKnown RBP10.16□□□□□ -0.78
SHMT2-207ENST00000553837 DKK4Q9UBT3 224 aa10.16□□□□□ -0.78
SHMT2-207ENST00000553837 METRNQ9UJH8 293 aa10.16□□□□□ -0.78
SHMT2-207ENST00000553837 KCNS2Q9ULS6 477 aa10.16□□□□□ -0.78
SHMT2-207ENST00000553837 TOX4O94842 621 aa10.15□□□□□ -0.78
SHMT2-207ENST00000553837 SCGB1A1P11684 91 aa10.15□□□□□ -0.78
SHMT2-207ENST00000553837 ZNF16P17020 682 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-207ENST00000553837 ATP5G3P48201 142 aa10.15□□□□□ -0.78
SHMT2-207ENST00000553837 HLA-DRB5Q30154 266 aa10.15□□□□□ -0.78
SHMT2-207ENST00000553837 PNKDQ8N490 385 aa10.15□□□□□ -0.78
SHMT2-207ENST00000553837 OR5B3Q8NH48 314 aa10.15□□□□□ -0.78
SHMT2-207ENST00000553837 NRN1Q9NPD7 142 aa10.15□□□□□ -0.78
SHMT2-207ENST00000553837 TBL2Q9Y4P3 447 aaKnown RBP10.15□□□□□ -0.78
SHMT2-207ENST00000553837 IGHV1-69-2A0A0G2JMI3 117 aa10.15□□□□□ -0.79
SHMT2-207ENST00000553837 PGPEP1LA6NFU8 196 aa10.15□□□□□ -0.79
SHMT2-207ENST00000553837 C12orf77C9JDV5 145 aa10.15□□□□□ -0.79
SHMT2-207ENST00000553837 REG1AP05451 166 aa10.15□□□□□ -0.79
SHMT2-207ENST00000553837 AESQ08117 197 aa10.15□□□□□ -0.79
SHMT2-207ENST00000553837 DEFB109BQ30KR1 87 aa10.15□□□□□ -0.79
SHMT2-207ENST00000553837 FGFRL1Q8N441 504 aa10.15□□□□□ -0.79
SHMT2-207ENST00000553837 COQ2Q96H96 371 aa10.15□□□□□ -0.79
SHMT2-207ENST00000553837 GNB1LQ9BYB4 327 aa10.15□□□□□ -0.79
SHMT2-207ENST00000553837 CLN8Q9UBY8 286 aa10.15□□□□□ -0.79
SHMT2-207ENST00000553837 INTS1Q8N201 2190 aaKnown RBP10.14□□□□□ -0.79
SHMT2-207ENST00000553837 CNOT1A5YKK6 2376 aaKnown RBP10.14□□□□□ -0.79
SHMT2-207ENST00000553837 CACNA1GO43497 2377 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 SAA2-SAA4A0A096LPE2 208 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 FABP6P51161 128 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 TFF3Q07654 80 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 VAMP3Q15836 100 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 MSMPQ1L6U9 139 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 OR10J3Q5JRS4 329 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 UNQ5815/PRO19632Q6UWF5 114 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 PET117Q6UWS5 81 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 WDR82Q6UXN9 313 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 SEM1Q6ZVN7 128 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 OR52L2PQ8NGH6 319 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 OCC1Q8TAD7 63 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 RAB1CQ92928 201 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 SMPXQ9UHP9 88 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 DIDO1Q9BTC0 2240 aaKnown RBP10.14□□□□□ -0.79
SHMT2-207ENST00000553837 TRAV17A0A0B4J275 112 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 A0A1W2PPV4 95 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 DPRXA6NFQ7 191 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 F2Z2F3 143 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 RAMP3O60896 148 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 IER3P46695 156 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 PRRX1P54821 245 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 LGALS4P56470 323 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 RPL30P62888 115 aaKnown RBP10.14□□□□□ -0.79
SHMT2-207ENST00000553837 VWC2Q2TAL6 325 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 TPRX1Q8N7U7 411 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 OR4S2Q8NH73 311 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 GNB4Q9HAV0 340 aa10.14□□□□□ -0.79
SHMT2-207ENST00000553837 PTPRBP23467 1997 aa10.13□□□□□ -0.79
SHMT2-207ENST00000553837 IGHV1-18A0A0C4DH31 117 aa10.13□□□□□ -0.79
SHMT2-207ENST00000553837 PMS2P5A8MQ11 134 aa10.13□□□□□ -0.79
SHMT2-207ENST00000553837 SNURFLB1AK76 121 aa10.13□□□□□ -0.79
SHMT2-207ENST00000553837 CORTO00230 105 aa10.13□□□□□ -0.79
SHMT2-207ENST00000553837 CGAP01215 116 aa10.13□□□□□ -0.79
SHMT2-207ENST00000553837 TSPOP30536 169 aa10.13□□□□□ -0.79
SHMT2-207ENST00000553837 AMTP48728 403 aa10.13□□□□□ -0.79
SHMT2-207ENST00000553837 HINT1P49773 126 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-207ENST00000553837 BRWD1-AS2P59051 145 aa10.13□□□□□ -0.79
SHMT2-207ENST00000553837 LINC00205P59089 165 aa10.13□□□□□ -0.79
SHMT2-207ENST00000553837 EIF4EBP1Q13541 118 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-207ENST00000553837 KRTCAP3Q53RY4 240 aa10.13□□□□□ -0.79
SHMT2-207ENST00000553837 WDR73Q6P4I2 378 aa10.13□□□□□ -0.79
SHMT2-207ENST00000553837 ACP7Q6ZNF0 438 aa10.13□□□□□ -0.79
SHMT2-207ENST00000553837 PLSCR4Q9NRQ2 329 aa10.13□□□□□ -0.79
SHMT2-207ENST00000553837 RNF114Q9Y508 228 aa10.13□□□□□ -0.79
SHMT2-207ENST00000553837 SVILO95425 2214 aa10.13□□□□□ -0.79
SHMT2-207ENST00000553837 TRBV20OR9-2A0A075B6H5 130 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 A0A1B0GV72 72 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 TMEM30CPA0ZSE6 113 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 IGLV1-44P01699 117 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 HBZP02008 142 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 MT-ND6P03923 174 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 THBS3P49746 956 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 HTD2P86397 168 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 RPEL1Q2QD12 228 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 NIT1Q86X76 327 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 KCNS1Q96KK3 526 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 DCTN5Q9BTE1 182 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 CXXC4Q9H2H0 198 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 ZNF71Q9NQZ8 489 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-207ENST00000553837 MGAQ8IWI9 3026 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 CACNA1DQ01668 2161 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 ZNF318Q5VUA4 2279 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 TIMM8AO60220 97 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-207ENST00000553837 GABRA2P47869 451 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 RBPJQ06330 500 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 PSG3Q16557 428 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 SPRNQ5BIV9 151 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 C19orf35Q6ZS72 473 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 BHLHA15Q7RTS1 189 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-207ENST00000553837 ZNF808Q8N4W9 903 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms