RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 V9GYS6 101 aa1.41□□□□□ -2.18
VRK1-202ENST00000553683 CCDC18Q5T9S5 1454 aa1.41□□□□□ -2.18
VRK1-202ENST00000553683 RPRD2Q5VT52 1461 aaKnown RBP1.41□□□□□ -2.18
VRK1-202ENST00000553683 ADGRB2O60241 1585 aa1.41□□□□□ -2.18
VRK1-202ENST00000553683 CEP170BQ9Y4F5 1589 aaPredicted RBP1.41□□□□□ -2.18
VRK1-202ENST00000553683 CASZ1Q86V15 1759 aa1.41□□□□□ -2.18
VRK1-202ENST00000553683 LAMA3Q16787 3333 aa1.41□□□□□ -2.18
VRK1-202ENST00000553683 RP1L1Q8IWN7 2480 aaPredicted RBP1.41□□□□□ -2.18
VRK1-202ENST00000553683 WDR87Q6ZQQ6 2873 aa1.41□□□□□ -2.18
VRK1-202ENST00000553683 XIRP2A4UGR9 3374 aa1.41□□□□□ -2.18
VRK1-202ENST00000553683 NPHP4O75161 1426 aaPredicted RBP1.4□□□□□ -2.18
VRK1-202ENST00000553683 UACAQ9BZF9 1416 aa1.4□□□□□ -2.18
VRK1-202ENST00000553683 EFCAB5A4FU69 1503 aa1.4□□□□□ -2.18
VRK1-202ENST00000553683 ZFYVE16Q7Z3T8 1539 aa1.4□□□□□ -2.18
VRK1-202ENST00000553683 TULP4Q9NRJ4 1543 aa1.4□□□□□ -2.18
VRK1-202ENST00000553683 ABCA3Q99758 1704 aa1.4□□□□□ -2.18
VRK1-202ENST00000553683 ZSWIM8A7E2V4 1837 aa1.4□□□□□ -2.18
VRK1-202ENST00000553683 VIRMAQ69YN4 1812 aaKnown RBP1.4□□□□□ -2.18
VRK1-202ENST00000553683 ABCA2Q9BZC7 2435 aa1.4□□□□□ -2.18
VRK1-202ENST00000553683 SETD2Q9BYW2 2564 aaPredicted RBP1.4□□□□□ -2.19
VRK1-202ENST00000553683 RREB1Q92766 1687 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 POLA1P09884 1462 aaPredicted RBP1.4□□□□□ -2.19
VRK1-202ENST00000553683 CFTRP13569 1480 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 TRAV19A0A0A6YYK7 116 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 IGLV1-36A0A0B4J1U3 117 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 SPAARA0A1B0GVQ0 90 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 A0A1B0GW64 132 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 IFITM5A6NNB3 132 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 FABP5P3A8MUU1 101 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 M0R1B8 84 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 TNFRSF11BO00300 401 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 FABP7O15540 132 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 FKBP6O75344 327 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 IGHV3-11P01762 117 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 TTRP02766 147 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 REG1AP05451 166 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 UCHL1P09936 223 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 OR5G3P0C626 314 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 GABRG2P18507 467 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 EVI2AP22794 236 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 CMPK1P30085 196 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 TGFBR1P36897 503 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 GNG5P63218 68 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 HOXC5Q00444 222 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 PSG9Q00887 426 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 MEF2CQ06413 473 aaPredicted RBP1.4□□□□□ -2.19
VRK1-202ENST00000553683 SMAGPQ0VAQ4 97 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 PMVKQ15126 192 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 IAH1Q2TAA2 248 aaPredicted RBP1.4□□□□□ -2.19
VRK1-202ENST00000553683 ZNF404Q494X3 552 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 GLYATL3Q5SZD4 288 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 C10orf91Q5T1B1 145 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 FAM27D1Q5T7N8 215 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 HBMQ6B0K9 141 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 OR10K2Q6IF99 312 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 RPL22L1Q6P5R6 122 aaKnown RBP1.4□□□□□ -2.19
VRK1-202ENST00000553683 WDR59Q6PJI9 974 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 C12orf54Q6X4T0 127 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 FAM183BPQ6ZVS7 135 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 VKORC1L1Q8N0U8 176 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 OR8I2Q8N0Y5 310 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 MMGT1Q8N4V1 131 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 TCTEX1D1Q8N7M0 179 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 PRELID2Q8N945 189 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 TSTD1Q8NFU3 115 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 OR5A1Q8NGJ0 315 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 OR5AR1Q8NGP9 310 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 OR2K2Q8NGT1 345 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 OR51Q1Q8NH59 317 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 MCFD2Q8NI22 146 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 FNDC9Q8TBE3 224 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 RXFP4Q8TDU9 374 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 SLC37A2Q8TED4 501 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 DOK4Q8TEW6 326 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 S100ZQ8WXG8 99 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 OR5P3Q8WZ94 311 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 PPCDCQ96CD2 204 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 ISOC1Q96CN7 298 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 MRPS24Q96EL2 167 aaKnown RBP1.4□□□□□ -2.19
VRK1-202ENST00000553683 BTN2A3PQ96KV6 586 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 TRIB3Q96RU7 358 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 MRPL57Q9BQC6 102 aaKnown RBP1.4□□□□□ -2.19
VRK1-202ENST00000553683 ZNF649Q9BS31 505 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 PSMG3Q9BT73 122 aaPredicted RBP1.4□□□□□ -2.19
VRK1-202ENST00000553683 CHCHD7Q9BUK0 85 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 OR2J1Q9GZK6 312 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 C20orf27Q9GZN8 174 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 FGF23Q9GZV9 251 aaPredicted RBP1.4□□□□□ -2.19
VRK1-202ENST00000553683 RNASE7Q9H1E1 156 aaKnown RBP1.4□□□□□ -2.19
VRK1-202ENST00000553683 GTSF1LQ9H1H1 148 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 FBXL15Q9H469 300 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 UQCC1Q9NVA1 299 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 SPANXCQ9NY87 97 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 DOK5Q9P104 306 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 NAT8Q9UHE5 227 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 TRAPPC2LQ9UL33 140 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 MCTS1Q9ULC4 181 aaKnown RBP1.4□□□□□ -2.19
VRK1-202ENST00000553683 BOKQ9UMX3 212 aaPredicted RBP1.4□□□□□ -2.19
VRK1-202ENST00000553683 BTRCQ9Y297 605 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 OR51B2Q9Y5P1 312 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms