RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 FAM53AQ6NSI3 398 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-209ENST00000553659 LINC00311Q8N616 119 aa12.84□□□□□ -0.35
ACTN1-209ENST00000553659 DDB2Q92466 427 aa12.84□□□□□ -0.35
ACTN1-209ENST00000553659 H1FXQ92522 213 aaKnown RBP12.84□□□□□ -0.35
ACTN1-209ENST00000553659 PARD6GQ9BYG4 376 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-209ENST00000553659 WFDC1Q9HC57 220 aa12.84□□□□□ -0.35
ACTN1-209ENST00000553659 C19orf12Q9NSK7 152 aa12.84□□□□□ -0.35
ACTN1-209ENST00000553659 SAA2-SAA4A0A096LPE2 208 aa12.83□□□□□ -0.36
ACTN1-209ENST00000553659 TMEM50AO95807 157 aa12.83□□□□□ -0.36
ACTN1-209ENST00000553659 RBP4P02753 201 aa12.83□□□□□ -0.36
ACTN1-209ENST00000553659 SAA2P0DJI9 122 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-209ENST00000553659 IL3RAP26951 378 aa12.83□□□□□ -0.36
ACTN1-209ENST00000553659 DYNLT3P51808 116 aa12.83□□□□□ -0.36
ACTN1-209ENST00000553659 BRWD1-AS2P59051 145 aa12.83□□□□□ -0.36
ACTN1-209ENST00000553659 RTL8BQ17RB0 113 aa12.83□□□□□ -0.36
ACTN1-209ENST00000553659 PRAMEF5Q5TYX0 476 aa12.83□□□□□ -0.36
ACTN1-209ENST00000553659 LYG1Q8N1E2 194 aa12.83□□□□□ -0.36
ACTN1-209ENST00000553659 PNKDQ8N490 385 aa12.83□□□□□ -0.36
ACTN1-209ENST00000553659 ZNF596Q8TC21 504 aa12.83□□□□□ -0.36
ACTN1-209ENST00000553659 A0A087X0M5 115 aa12.82□□□□□ -0.36
ACTN1-209ENST00000553659 A0A1B0GX30 115 aa12.82□□□□□ -0.36
ACTN1-209ENST00000553659 M0R1W7 72 aa12.82□□□□□ -0.36
ACTN1-209ENST00000553659 PROP1O75360 226 aa12.82□□□□□ -0.36
ACTN1-209ENST00000553659 FBXO24O75426 580 aa12.82□□□□□ -0.36
ACTN1-209ENST00000553659 RBMXL2O75526 392 aaKnown RBP12.82□□□□□ -0.36
ACTN1-209ENST00000553659 HRASP01112 189 aa12.82□□□□□ -0.36
ACTN1-209ENST00000553659 OR8U8P0C7N1 319 aa12.82□□□□□ -0.36
ACTN1-209ENST00000553659 ZNF273Q14593 569 aa12.82□□□□□ -0.36
ACTN1-209ENST00000553659 CLINT1Q14677 625 aa12.82□□□□□ -0.36
ACTN1-209ENST00000553659 POU2AF1Q16633 256 aa12.82□□□□□ -0.36
ACTN1-209ENST00000553659 BEAN1Q3B7T3 259 aa12.82□□□□□ -0.36
ACTN1-209ENST00000553659 RPL39P5Q59GN2 51 aa12.82□□□□□ -0.36
ACTN1-209ENST00000553659 TMEM200BQ69YZ2 307 aa12.82□□□□□ -0.36
ACTN1-209ENST00000553659 DPPA3Q6W0C5 159 aa12.82□□□□□ -0.36
ACTN1-209ENST00000553659 BEND2Q8NDZ0 799 aa12.82□□□□□ -0.36
ACTN1-209ENST00000553659 OR4A16Q8NH70 328 aa12.82□□□□□ -0.36
ACTN1-209ENST00000553659 DTD1Q8TEA8 209 aa12.82□□□□□ -0.36
ACTN1-209ENST00000553659 RBKSQ9H477 322 aa12.82□□□□□ -0.36
ACTN1-209ENST00000553659 MEX3AA1L020 520 aaKnown RBP12.81□□□□□ -0.36
ACTN1-209ENST00000553659 G3V4G9 280 aa12.81□□□□□ -0.36
ACTN1-209ENST00000553659 SLC31A2O15432 143 aa12.81□□□□□ -0.36
ACTN1-209ENST00000553659 CST7O76096 145 aa12.81□□□□□ -0.36
ACTN1-209ENST00000553659 OPN1MWP04001 364 aa12.81□□□□□ -0.36
ACTN1-209ENST00000553659 OPN1MW2P0DN77 364 aa12.81□□□□□ -0.36
ACTN1-209ENST00000553659 OPN1MW3P0DN78 364 aa12.81□□□□□ -0.36
ACTN1-209ENST00000553659 IAPPP10997 89 aa12.81□□□□□ -0.36
ACTN1-209ENST00000553659 SPCS3P61009 180 aa12.81□□□□□ -0.36
ACTN1-209ENST00000553659 PJVKQ0ZLH3 352 aa12.81□□□□□ -0.36
ACTN1-209ENST00000553659 KPRPQ5T749 579 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-209ENST00000553659 PXDC1Q5TGL8 231 aa12.81□□□□□ -0.36
ACTN1-209ENST00000553659 SLC25A24Q6NUK1 477 aa12.81□□□□□ -0.36
ACTN1-209ENST00000553659 TMEM14EPQ6UXP3 125 aa12.81□□□□□ -0.36
ACTN1-209ENST00000553659 ZNF833PQ6ZTB9 187 aa12.81□□□□□ -0.36
ACTN1-209ENST00000553659 ZNF429Q86V71 674 aa12.81□□□□□ -0.36
ACTN1-209ENST00000553659 ODF3L1Q8IXM7 274 aa12.81□□□□□ -0.36
ACTN1-209ENST00000553659 LFNGQ8NES3 379 aa12.81□□□□□ -0.36
ACTN1-209ENST00000553659 SCGB1C1Q8TD33 95 aa12.81□□□□□ -0.36
ACTN1-209ENST00000553659 PINX1Q96BK5 328 aaKnown RBP12.81□□□□□ -0.36
ACTN1-209ENST00000553659 BSCL2Q96G97 398 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-209ENST00000553659 SSX3Q99909 188 aa12.81□□□□□ -0.36
ACTN1-209ENST00000553659 ZNF251Q9BRH9 671 aa12.81□□□□□ -0.36
ACTN1-209ENST00000553659 hCG_1809904A0A1W2PP81 198 aa12.8□□□□□ -0.36
ACTN1-209ENST00000553659 A0A1W2PPE2 198 aa12.8□□□□□ -0.36
ACTN1-209ENST00000553659 A0A1W2PR64 198 aa12.8□□□□□ -0.36
ACTN1-209ENST00000553659 A0A1W2PRV1 198 aa12.8□□□□□ -0.36
ACTN1-209ENST00000553659 H3BUX3 64 aa12.8□□□□□ -0.36
ACTN1-209ENST00000553659 NXPH3O95157 252 aa12.8□□□□□ -0.36
ACTN1-209ENST00000553659 APOA2P02652 100 aa12.8□□□□□ -0.36
ACTN1-209ENST00000553659 GNG10P50151 68 aa12.8□□□□□ -0.36
ACTN1-209ENST00000553659 IZUMO4Q1ZYL8 232 aa12.8□□□□□ -0.36
ACTN1-209ENST00000553659 PUSL1Q8N0Z8 303 aaKnown RBP12.8□□□□□ -0.36
ACTN1-209ENST00000553659 LILRB2Q8N423 598 aa12.8□□□□□ -0.36
ACTN1-209ENST00000553659 HSD17B11Q8NBQ5 300 aa12.8□□□□□ -0.36
ACTN1-209ENST00000553659 OR9G1Q8NH87 305 aa12.8□□□□□ -0.36
ACTN1-209ENST00000553659 LYPD6BQ8NI32 183 aa12.8□□□□□ -0.36
ACTN1-209ENST00000553659 CFHR4Q92496 578 aa12.8□□□□□ -0.36
ACTN1-209ENST00000553659 PSMG3Q9BT73 122 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-209ENST00000553659 SIGLEC9Q9Y336 463 aa12.8□□□□□ -0.36
ACTN1-209ENST00000553659 CEBPZOSA8MTT3 80 aa12.79□□□□□ -0.36
ACTN1-209ENST00000553659 PRH1P02810 166 aa12.79□□□□□ -0.36
ACTN1-209ENST00000553659 ATP6V0CP27449 155 aa12.79□□□□□ -0.36
ACTN1-209ENST00000553659 CAMLGP49069 296 aa12.79□□□□□ -0.36
ACTN1-209ENST00000553659 SPANXN5Q5MJ07 72 aa12.79□□□□□ -0.36
ACTN1-209ENST00000553659 SAMD5Q5TGI4 173 aa12.79□□□□□ -0.36
ACTN1-209ENST00000553659 HCP5Q6MZN7 132 aa12.79□□□□□ -0.36
ACTN1-209ENST00000553659 BTNL8Q6UX41 500 aa12.79□□□□□ -0.36
ACTN1-209ENST00000553659 Q6ZRG5 221 aa12.79□□□□□ -0.36
ACTN1-209ENST00000553659 TMEM217Q8N7C4 229 aa12.79□□□□□ -0.36
ACTN1-209ENST00000553659 OR2G3Q8NGZ4 309 aa12.79□□□□□ -0.36
ACTN1-209ENST00000553659 OSR1Q8TAX0 266 aaPredicted RBP12.79□□□□□ -0.36
ACTN1-209ENST00000553659 MEGF9Q9H1U4 602 aa12.79□□□□□ -0.36
ACTN1-209ENST00000553659 TMEM140Q9NV12 185 aa12.79□□□□□ -0.36
ACTN1-209ENST00000553659 SOX15O60248 233 aa12.78□□□□□ -0.36
ACTN1-209ENST00000553659 ZNF137PP52743 207 aa12.78□□□□□ -0.36
ACTN1-209ENST00000553659 DLX6P56179 175 aa12.78□□□□□ -0.36
ACTN1-209ENST00000553659 RAB2AP61019 212 aa12.78□□□□□ -0.36
ACTN1-209ENST00000553659 TMEM267Q0VDI3 215 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-209ENST00000553659 REC114Q7Z4M0 266 aa12.78□□□□□ -0.36
ACTN1-209ENST00000553659 ZNF383Q8NA42 475 aa12.78□□□□□ -0.36
ACTN1-209ENST00000553659 OR4C13Q8NGP0 309 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms