RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 RND1Q92730 232 aa7.6□□□□□ -1.19
GTF2A1-203ENST00000553612 SPANXA1Q9NS26 97 aa7.6□□□□□ -1.19
GTF2A1-203ENST00000553612 TCF19Q9Y242 345 aa7.6□□□□□ -1.19
GTF2A1-203ENST00000553612 SMCHD1A6NHR9 2005 aa7.6□□□□□ -1.19
GTF2A1-203ENST00000553612 H0YIG0 161 aa7.6□□□□□ -1.19
GTF2A1-203ENST00000553612 PATE4P0C8F1 98 aa7.6□□□□□ -1.19
GTF2A1-203ENST00000553612 RPL31P62899 125 aaKnown RBP7.6□□□□□ -1.19
GTF2A1-203ENST00000553612 RFESDQ8TAC1 157 aa7.6□□□□□ -1.19
GTF2A1-203ENST00000553612 YPEL4Q96NS1 127 aa7.6□□□□□ -1.19
GTF2A1-203ENST00000553612 ATAD5Q96QE3 1844 aa7.59□□□□□ -1.19
GTF2A1-203ENST00000553612 P01737 135 aa7.59□□□□□ -1.19
GTF2A1-203ENST00000553612 CXorf67Q86X51 503 aaPredicted RBP7.59□□□□□ -1.19
GTF2A1-203ENST00000553612 C3P01024 1663 aa7.59□□□□□ -1.19
GTF2A1-203ENST00000553612 H0YGG7 62 aa7.59□□□□□ -1.19
GTF2A1-203ENST00000553612 TIMM8AO60220 97 aaPredicted RBP7.59□□□□□ -1.19
GTF2A1-203ENST00000553612 CCL7P80098 99 aa7.59□□□□□ -1.19
GTF2A1-203ENST00000553612 NEUROG1Q92886 237 aa7.59□□□□□ -1.19
GTF2A1-203ENST00000553612 IGHV3-21A0A0B4J1V1 117 aa7.59□□□□□ -1.19
GTF2A1-203ENST00000553612 MOSP00540 346 aa7.59□□□□□ -1.19
GTF2A1-203ENST00000553612 DEFB104AQ8WTQ1 72 aa7.59□□□□□ -1.19
GTF2A1-203ENST00000553612 CHAC1Q9BUX1 264 aa7.59□□□□□ -1.19
GTF2A1-203ENST00000553612 CRXO43186 299 aaPredicted RBP7.59□□□□□ -1.19
GTF2A1-203ENST00000553612 ZNF157P51786 506 aaPredicted RBP7.59□□□□□ -1.19
GTF2A1-203ENST00000553612 DNM1P46Q6ZS02 220 aa7.59□□□□□ -1.19
GTF2A1-203ENST00000553612 OSR2Q8N2R0 312 aa7.59□□□□□ -1.19
GTF2A1-203ENST00000553612 OR9G4Q8NGQ1 327 aa7.59□□□□□ -1.19
GTF2A1-203ENST00000553612 DUX3Q96PT4 197 aa7.59□□□□□ -1.19
GTF2A1-203ENST00000553612 TMUB1Q9BVT8 246 aa7.59□□□□□ -1.19
GTF2A1-203ENST00000553612 MSRB2Q9Y3D2 182 aa7.59□□□□□ -1.19
GTF2A1-203ENST00000553612 HCFC2Q9Y5Z7 792 aa7.59□□□□□ -1.19
GTF2A1-203ENST00000553612 FER1L4A9Z1Z3 1794 aa7.59□□□□□ -1.19
GTF2A1-203ENST00000553612 NDUFA3O95167 84 aa7.59□□□□□ -1.2
GTF2A1-203ENST00000553612 TEX45Q8NA69 505 aa7.59□□□□□ -1.2
GTF2A1-203ENST00000553612 SPANXB1Q9NS25 103 aaPredicted RBP7.59□□□□□ -1.2
GTF2A1-203ENST00000553612 RNF115Q9Y4L5 304 aa7.59□□□□□ -1.2
GTF2A1-203ENST00000553612 LRRC37A3O60309 1634 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 FAM236AA0A1B0GUQ0 79 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 FAM236BA0A1B0GV22 79 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 YLPM1P49750 1951 aaKnown RBP7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 NUP188Q5SRE5 1749 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 ZNF732B4DXR9 585 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 SPINT2O43291 252 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 ORM2P19652 201 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 KIR2DL1P43626 348 aaPredicted RBP7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 TMEM187Q14656 261 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 WIPI1Q5MNZ9 446 aaPredicted RBP7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 IL17RELQ6ZVW7 336 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 FAM214BQ7L5A3 538 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 BCL2L10Q9HD36 194 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 CABIN1Q9Y6J0 2220 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 XGP55808 180 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 HERVK_113P63121 156 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 SLC37A2Q8TED4 501 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 U3KQE9 123 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 DNAJC13O75165 2243 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 SCN7AQ01118 1682 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 K7ESF4 209 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 LAMTOR5O43504 91 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 PCBD1P61457 104 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 Q0VG73 95 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 PSG7Q13046 419 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 C18orf32Q8TCD1 76 aa7.58□□□□□ -1.2
GTF2A1-203ENST00000553612 PKD1L3Q7Z443 1732 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 ARHGAP21Q5T5U3 1957 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 DNAJC25-GNG10A0A024R161 153 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 MIC13Q5XKP0 118 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 TMEM211Q6ICI0 200 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 EBLN2Q6P2I7 272 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 A0A096LPE4 126 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 A0A0B4J2E0 115 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 A0A1B0GX12 115 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 A0A1W2PPZ6 126 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 UPK3AO75631 287 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 FAM110CQ1W6H9 321 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 NABP1Q96AH0 204 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 ANKRD36CQ5JPF3 1778 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 IGKV6-21A0A0C4DH24 114 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 J3QLI3 93 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 MGST3O14880 152 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 COX8AP10176 69 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 MNX1P50219 401 aaPredicted RBP7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 PIK3C2AO00443 1686 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 PPYP01298 95 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 RPL15P61313 204 aaKnown RBP7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 TFF3Q07654 80 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 NMSQ5H8A3 153 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 OR13A1Q8NGR1 328 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 PI4KAP42356 2102 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 KLK10O43240 276 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 IGHV3-48P01763 117 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 RNASE1P07998 156 aaKnown RBP7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 ERVK11-1P61568 191 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 ZIC4Q8N9L1 334 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 SIRPDQ9H106 197 aa7.57□□□□□ -1.2
GTF2A1-203ENST00000553612 TINCRA0A1B0GVN0 87 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 UNC119Q13432 240 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 CBLN3Q6UW01 205 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 KIR3DL3Q8N743 410 aa7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 KISS1RQ969F8 398 aaPredicted RBP7.56□□□□□ -1.2
GTF2A1-203ENST00000553612 TMEM101Q96IK0 257 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms