RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 UCHL1P09936 223 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 MYOD1P15172 320 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 GPR183P32249 361 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 RASSF2P50749 326 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 MFAP2P55001 183 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 BRWD1-AS2P59051 145 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 RPL30P62888 115 aaKnown RBP5.3□□□□□ -1.56
ATXN3-219ENST00000553488 PLA2G7Q13093 441 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 MED21Q13503 144 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 EIF4EBP1Q13541 118 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-219ENST00000553488 ARFRP1Q13795 201 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 IRF3Q14653 427 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 ACSM3Q53FZ2 586 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 TMEM167AQ8TBQ9 72 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 CD300LFQ8TDQ1 290 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 MAFIPQ8WZ33 124 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 ZNF414Q96IQ9 312 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 OR51E2Q9H255 320 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 SMPD3Q9NY59 655 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-219ENST00000553488 UFC1Q9Y3C8 167 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 MFNGO00587 321 aa5.29□□□□□ -1.56
ATXN3-219ENST00000553488 IFNA4P05014 189 aa5.29□□□□□ -1.56
ATXN3-219ENST00000553488 REG1AP05451 166 aa5.29□□□□□ -1.56
ATXN3-219ENST00000553488 HIST1H1BP16401 226 aaKnown RBP5.29□□□□□ -1.56
ATXN3-219ENST00000553488 MAS1LP35410 378 aa5.29□□□□□ -1.56
ATXN3-219ENST00000553488 MED22Q15528 200 aa5.29□□□□□ -1.56
ATXN3-219ENST00000553488 HSD17B12Q53GQ0 312 aa5.29□□□□□ -1.56
ATXN3-219ENST00000553488 OR2B11Q5JQS5 317 aa5.29□□□□□ -1.56
ATXN3-219ENST00000553488 Q6ZS49 121 aa5.29□□□□□ -1.56
ATXN3-219ENST00000553488 KCTD9Q7L273 389 aa5.29□□□□□ -1.56
ATXN3-219ENST00000553488 APRG1Q8IVJ8 170 aa5.29□□□□□ -1.56
ATXN3-219ENST00000553488 MS4A15Q8N5U1 240 aa5.29□□□□□ -1.56
ATXN3-219ENST00000553488 ZNF645Q8N7E2 425 aa5.29□□□□□ -1.56
ATXN3-219ENST00000553488 NANOGP1Q8N7R0 232 aa5.29□□□□□ -1.56
ATXN3-219ENST00000553488 OR56B1Q8NGI3 324 aa5.29□□□□□ -1.56
ATXN3-219ENST00000553488 OR11H2Q8NH07 326 aa5.29□□□□□ -1.56
ATXN3-219ENST00000553488 OR5B3Q8NH48 314 aa5.29□□□□□ -1.56
ATXN3-219ENST00000553488 NTN5Q8WTR8 489 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-219ENST00000553488 RAB24Q969Q5 203 aa5.29□□□□□ -1.56
ATXN3-219ENST00000553488 CXorf58Q96LI9 332 aa5.29□□□□□ -1.56
ATXN3-219ENST00000553488 OR2A7Q96R45 310 aa5.29□□□□□ -1.56
ATXN3-219ENST00000553488 RARRES2Q99969 163 aa5.29□□□□□ -1.56
ATXN3-219ENST00000553488 DAZ1Q9NQZ3 744 aaKnown RBP5.29□□□□□ -1.56
ATXN3-219ENST00000553488 FKBP14Q9NWM8 211 aa5.29□□□□□ -1.56
ATXN3-219ENST00000553488 PSORS1C1Q9UIG5 152 aa5.29□□□□□ -1.56
ATXN3-219ENST00000553488 VPS13BQ7Z7G8 4022 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 IGKV1D-13A0A0B4J2D9 117 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 TMEM272A0A1B0GTI8 110 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 IGLC7A0M8Q6 106 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 DPPA5A6NC42 116 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 OR4C46A6NHA9 309 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 PRSS29PA6NIE9 313 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 MPTX1A8MV57 137 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 IGLL5B9A064 214 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 DEFB4AO15263 64 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 TGOLN2O43493 480 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 XRCC3O43542 346 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 ATP5HO75947 161 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 DHFRP00374 187 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 CTSDP07339 412 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-219ENST00000553488 IGKV1-13P0DP09 117 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 CLDN12P56749 244 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 OR2B8PP59922 312 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 AHSA2Q719I0 299 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 Q8NAQ8 132 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 ZNF555Q8NEP9 628 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 OR4S2Q8NH73 311 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 VSTM2AQ8TAG5 236 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 GINS4Q9BRT9 223 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 CSTL1Q9H114 145 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 HRH4Q9H3N8 390 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 PLGRKTQ9HBL7 147 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 MRPS7Q9Y2R9 242 aaKnown RBP5.28□□□□□ -1.56
ATXN3-219ENST00000553488 LSM2Q9Y333 95 aaKnown RBP5.28□□□□□ -1.56
ATXN3-219ENST00000553488 RBMX2Q9Y388 322 aaKnown RBP5.28□□□□□ -1.56
ATXN3-219ENST00000553488 RBM7Q9Y580 266 aaKnown RBP5.28□□□□□ -1.56
ATXN3-219ENST00000553488 MYCBP2O75592 4640 aa5.28□□□□□ -1.56
ATXN3-219ENST00000553488 IGHV4-4A0A075B6R2 117 aa5.27□□□□□ -1.57
ATXN3-219ENST00000553488 C11orf94C9JXX5 98 aa5.27□□□□□ -1.57
ATXN3-219ENST00000553488 RAB27BO00194 218 aa5.27□□□□□ -1.57
ATXN3-219ENST00000553488 NDUFA4O00483 81 aa5.27□□□□□ -1.57
ATXN3-219ENST00000553488 HLA-DQB1P01920 261 aa5.27□□□□□ -1.57
ATXN3-219ENST00000553488 RPA2P15927 270 aa5.27□□□□□ -1.57
ATXN3-219ENST00000553488 GNB3P16520 340 aa5.27□□□□□ -1.57
ATXN3-219ENST00000553488 CD36P16671 472 aa5.27□□□□□ -1.57
ATXN3-219ENST00000553488 HLA-GP17693 338 aa5.27□□□□□ -1.57
ATXN3-219ENST00000553488 PTBP1P26599 531 aaKnown RBP eCLIP5.27□□□□□ -1.574e-18■■■■■ 40.6
ATXN3-219ENST00000553488 PSMD7P51665 324 aa5.27□□□□□ -1.57
ATXN3-219ENST00000553488 RPL8P62917 257 aaKnown RBP5.27□□□□□ -1.57
ATXN3-219ENST00000553488 FAT1Q14517 4588 aa5.27□□□□□ -1.57
ATXN3-219ENST00000553488 RAB11BQ15907 218 aa5.27□□□□□ -1.57
ATXN3-219ENST00000553488 TIMM50Q3ZCQ8 353 aa5.27□□□□□ -1.57
ATXN3-219ENST00000553488 LAMTOR1Q6IAA8 161 aa5.27□□□□□ -1.57
ATXN3-219ENST00000553488 PLET1Q6UQ28 207 aa5.27□□□□□ -1.57
ATXN3-219ENST00000553488 TMEM91Q6ZNR0 172 aa5.27□□□□□ -1.57
ATXN3-219ENST00000553488 SSX9Q7RTT3 188 aa5.27□□□□□ -1.57
ATXN3-219ENST00000553488 FAM3DQ96BQ1 224 aa5.27□□□□□ -1.57
ATXN3-219ENST00000553488 RAB3CQ96E17 227 aa5.27□□□□□ -1.57
ATXN3-219ENST00000553488 DCUN1D5Q9BTE7 237 aa5.27□□□□□ -1.57
ATXN3-219ENST00000553488 CHRDL1Q9BU40 450 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms