RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 GNRHRP30968 328 aa9.6□□□□□ -0.87
LINC00643-202ENST00000553426 GPR183P32249 361 aa9.6□□□□□ -0.87
LINC00643-202ENST00000553426 PRSS3P35030 304 aa9.6□□□□□ -0.87
LINC00643-202ENST00000553426 RFX2P48378 723 aa9.6□□□□□ -0.87
LINC00643-202ENST00000553426 ELLP55199 621 aaPredicted RBP9.6□□□□□ -0.87
LINC00643-202ENST00000553426 DHRS11Q6UWP2 260 aa9.6□□□□□ -0.87
LINC00643-202ENST00000553426 LINC00322Q6ZN03 302 aaPredicted RBP9.6□□□□□ -0.87
LINC00643-202ENST00000553426 OR1L8Q8NGR8 309 aa9.6□□□□□ -0.87
LINC00643-202ENST00000553426 OR6F1Q8NGZ6 308 aa9.6□□□□□ -0.87
LINC00643-202ENST00000553426 MOB3AQ96BX8 217 aa9.6□□□□□ -0.87
LINC00643-202ENST00000553426 ZNF2Q9BSG1 426 aaPredicted RBP9.6□□□□□ -0.87
LINC00643-202ENST00000553426 MRPL27Q9P0M9 148 aaKnown RBP9.6□□□□□ -0.87
LINC00643-202ENST00000553426 PLECQ15149 4684 aaKnown RBP9.59□□□□□ -0.87
LINC00643-202ENST00000553426 TRAV25A0A0B4J276 109 aa9.59□□□□□ -0.87
LINC00643-202ENST00000553426 RBMY1BA6NDE4 496 aaKnown RBP9.59□□□□□ -0.87
LINC00643-202ENST00000553426 RBMY1EA6NEQ0 496 aaKnown RBP9.59□□□□□ -0.87
LINC00643-202ENST00000553426 PMP2P02689 132 aa9.59□□□□□ -0.87
LINC00643-202ENST00000553426 RBMY1DP0C7P1 496 aaKnown RBP9.59□□□□□ -0.87
LINC00643-202ENST00000553426 OR13C7P0DN81 318 aa9.59□□□□□ -0.87
LINC00643-202ENST00000553426 RPA2P15927 270 aa9.59□□□□□ -0.87
LINC00643-202ENST00000553426 EDN2P20800 178 aa9.59□□□□□ -0.87
LINC00643-202ENST00000553426 TAS2R20P59543 309 aa9.59□□□□□ -0.87
LINC00643-202ENST00000553426 ZNF585BQ52M93 769 aa9.59□□□□□ -0.87
LINC00643-202ENST00000553426 TM4SF20Q53R12 229 aa9.59□□□□□ -0.87
LINC00643-202ENST00000553426 SLC25A24Q6NUK1 477 aa9.59□□□□□ -0.87
LINC00643-202ENST00000553426 SLC38A6Q8IZM9 456 aa9.59□□□□□ -0.87
LINC00643-202ENST00000553426 TMEM61Q8N0U2 210 aa9.59□□□□□ -0.87
LINC00643-202ENST00000553426 GDPD1Q8N9F7 314 aa9.59□□□□□ -0.87
LINC00643-202ENST00000553426 ZNF502Q8TBZ5 544 aa9.59□□□□□ -0.87
LINC00643-202ENST00000553426 VN1R17PQ8TDU5 208 aa9.59□□□□□ -0.87
LINC00643-202ENST00000553426 DGCR14Q96DF8 476 aaKnown RBP9.59□□□□□ -0.87
LINC00643-202ENST00000553426 FAM110AQ9BQ89 295 aa9.59□□□□□ -0.87
LINC00643-202ENST00000553426 HINT2Q9BX68 163 aa9.59□□□□□ -0.87
LINC00643-202ENST00000553426 RETNQ9HD89 108 aa9.59□□□□□ -0.87
LINC00643-202ENST00000553426 FKBP11Q9NYL4 201 aa9.59□□□□□ -0.87
LINC00643-202ENST00000553426 MLXQ9UH92 298 aa9.59□□□□□ -0.87
LINC00643-202ENST00000553426 A0A087WXM4 84 aa9.58□□□□□ -0.88
LINC00643-202ENST00000553426 TEX50A0A1B0GTY4 177 aa9.58□□□□□ -0.88
LINC00643-202ENST00000553426 CGB1A6NKQ9 187 aa9.58□□□□□ -0.88
LINC00643-202ENST00000553426 GPR31O00270 319 aa9.58□□□□□ -0.88
LINC00643-202ENST00000553426 TGOLN2O43493 480 aa9.58□□□□□ -0.88
LINC00643-202ENST00000553426 PGLYRP1O75594 196 aaPredicted RBP9.58□□□□□ -0.88
LINC00643-202ENST00000553426 JTBO76095 146 aa9.58□□□□□ -0.88
LINC00643-202ENST00000553426 SCAF4O95104 1147 aaKnown RBP9.58□□□□□ -0.88
LINC00643-202ENST00000553426 KRASP01116 189 aa9.58□□□□□ -0.88
LINC00643-202ENST00000553426 SERPINE2P07093 398 aa9.58□□□□□ -0.88
LINC00643-202ENST00000553426 RPS19P39019 145 aaKnown RBP9.58□□□□□ -0.88
LINC00643-202ENST00000553426 LPAR6P43657 344 aa9.58□□□□□ -0.88
LINC00643-202ENST00000553426 TSPAN5P62079 268 aa9.58□□□□□ -0.88
LINC00643-202ENST00000553426 LSM3P62310 102 aaKnown RBP9.58□□□□□ -0.88
LINC00643-202ENST00000553426 LAMTOR1Q6IAA8 161 aa9.58□□□□□ -0.88
LINC00643-202ENST00000553426 LPCAT3Q6P1A2 487 aa9.58□□□□□ -0.88
LINC00643-202ENST00000553426 BTNL8Q6UX41 500 aa9.58□□□□□ -0.88
LINC00643-202ENST00000553426 OR10W1Q8NGF6 305 aa9.58□□□□□ -0.88
LINC00643-202ENST00000553426 OR1L6Q8NGR2 347 aa9.58□□□□□ -0.88
LINC00643-202ENST00000553426 LSM10Q969L4 123 aaKnown RBP9.58□□□□□ -0.88
LINC00643-202ENST00000553426 BSCL2Q96G97 398 aaPredicted RBP9.58□□□□□ -0.88
LINC00643-202ENST00000553426 TMEM56Q96MV1 263 aa9.58□□□□□ -0.88
LINC00643-202ENST00000553426 TSC22D3Q99576 134 aa9.58□□□□□ -0.88
LINC00643-202ENST00000553426 WFDC10AQ9H1F0 79 aa9.58□□□□□ -0.88
LINC00643-202ENST00000553426 IGHV3-35A0A0C4DH35 117 aa9.57□□□□□ -0.88
LINC00643-202ENST00000553426 C8orf88P0DMB2 117 aa9.57□□□□□ -0.88
LINC00643-202ENST00000553426 NAT1P18440 290 aa9.57□□□□□ -0.88
LINC00643-202ENST00000553426 SPSB3Q6PJ21 355 aa9.57□□□□□ -0.88
LINC00643-202ENST00000553426 UNQ9165/PRO28630Q6UXU0 137 aa9.57□□□□□ -0.88
LINC00643-202ENST00000553426 CADM3Q8N126 398 aa9.57□□□□□ -0.88
LINC00643-202ENST00000553426 FCAMRQ8WWV6 532 aa9.57□□□□□ -0.88
LINC00643-202ENST00000553426 ATP6V0BQ99437 205 aa9.57□□□□□ -0.88
LINC00643-202ENST00000553426 GGTLC1Q9BX51 225 aa9.57□□□□□ -0.88
LINC00643-202ENST00000553426 PRNDQ9UKY0 176 aa9.57□□□□□ -0.88
LINC00643-202ENST00000553426 OR51B2Q9Y5P1 312 aa9.57□□□□□ -0.88
LINC00643-202ENST00000553426 SELENOKQ9Y6D0 94 aa9.57□□□□□ -0.88
LINC00643-202ENST00000553426 LOC102724200A0A096LPH7 203 aaPredicted RBP9.56□□□□□ -0.88
LINC00643-202ENST00000553426 OR2T8A6NH00 312 aa9.56□□□□□ -0.88
LINC00643-202ENST00000553426 TNFAIP8O95379 198 aa9.56□□□□□ -0.88
LINC00643-202ENST00000553426 HLA-DMAP28067 261 aa9.56□□□□□ -0.88
LINC00643-202ENST00000553426 HRH1P35367 487 aa9.56□□□□□ -0.88
LINC00643-202ENST00000553426 G6PCP35575 357 aa9.56□□□□□ -0.88
LINC00643-202ENST00000553426 TGFBR1P36897 503 aa9.56□□□□□ -0.88
LINC00643-202ENST00000553426 WT1-ASQ06250 92 aa9.56□□□□□ -0.88
LINC00643-202ENST00000553426 OR2C3Q8N628 320 aa9.56□□□□□ -0.88
LINC00643-202ENST00000553426 OR5B3Q8NH48 314 aa9.56□□□□□ -0.88
LINC00643-202ENST00000553426 SLC25A46Q96AG3 418 aa9.56□□□□□ -0.88
LINC00643-202ENST00000553426 CMTM3Q96MX0 182 aa9.56□□□□□ -0.88
LINC00643-202ENST00000553426 ZNF436Q9C0F3 470 aaPredicted RBP9.56□□□□□ -0.88
LINC00643-202ENST00000553426 C5orf66Q9H5L9 145 aa9.56□□□□□ -0.88
LINC00643-202ENST00000553426 SCPEP1Q9HB40 452 aa9.56□□□□□ -0.88
LINC00643-202ENST00000553426 DAZ1Q9NQZ3 744 aaKnown RBP9.56□□□□□ -0.88
LINC00643-202ENST00000553426 NDUFA4L2Q9NRX3 87 aa9.56□□□□□ -0.88
LINC00643-202ENST00000553426 C21orf62Q9NYP8 219 aa9.56□□□□□ -0.88
LINC00643-202ENST00000553426 ANAPC10Q9UM13 185 aa9.56□□□□□ -0.88
LINC00643-202ENST00000553426 F11RQ9Y624 299 aaKnown RBP9.56□□□□□ -0.88
LINC00643-202ENST00000553426 APOA1P02647 267 aa9.55□□□□□ -0.88
LINC00643-202ENST00000553426 Q56UQ5 140 aa9.55□□□□□ -0.88
LINC00643-202ENST00000553426 UBAC2Q8NBM4 344 aa9.55□□□□□ -0.88
LINC00643-202ENST00000553426 TMEM190Q8WZ59 177 aa9.55□□□□□ -0.88
LINC00643-202ENST00000553426 YIPF6Q96EC8 236 aa9.55□□□□□ -0.88
LINC00643-202ENST00000553426 SPAG8Q99932 426 aaPredicted RBP9.55□□□□□ -0.88
LINC00643-202ENST00000553426 C20orf24Q9BUV8 137 aa9.55□□□□□ -0.88
LINC00643-202ENST00000553426 FXYD6Q9H0Q3 95 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms