RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 HLA-AP01891 365 aaKnown RBP7.8□□□□□ -1.16
LINC00517-201ENST00000553396 CD74P04233 296 aa7.8□□□□□ -1.16
LINC00517-201ENST00000553396 IGKV1D-39P04432 117 aa7.8□□□□□ -1.16
LINC00517-201ENST00000553396 CRYGCP07315 174 aa7.8□□□□□ -1.16
LINC00517-201ENST00000553396 TRAPPC2P0DI81 140 aa7.8□□□□□ -1.16
LINC00517-201ENST00000553396 TRAPPC2BP0DI82 140 aa7.8□□□□□ -1.16
LINC00517-201ENST00000553396 PIGPP57054 158 aa7.8□□□□□ -1.16
LINC00517-201ENST00000553396 MRPS10P82664 201 aaKnown RBP7.8□□□□□ -1.16
LINC00517-201ENST00000553396 CD69Q07108 199 aa7.8□□□□□ -1.16
LINC00517-201ENST00000553396 DCTN2Q13561 401 aaKnown RBP7.8□□□□□ -1.16
LINC00517-201ENST00000553396 MRGPRFQ96AM1 343 aa7.8□□□□□ -1.16
LINC00517-201ENST00000553396 CCDC140Q96MF4 163 aa7.8□□□□□ -1.16
LINC00517-201ENST00000553396 FANCD2OSQ96PS1 177 aa7.8□□□□□ -1.16
LINC00517-201ENST00000553396 OR51B2Q9Y5P1 312 aa7.8□□□□□ -1.16
LINC00517-201ENST00000553396 DNAH9Q9NYC9 4486 aa7.79□□□□□ -1.16
LINC00517-201ENST00000553396 TEX50A0A1B0GTY4 177 aa7.79□□□□□ -1.16
LINC00517-201ENST00000553396 MFSD2BA6NFX1 497 aa7.79□□□□□ -1.16
LINC00517-201ENST00000553396 DBX1A6NMT0 343 aa7.79□□□□□ -1.16
LINC00517-201ENST00000553396 SERPINE2P07093 398 aa7.79□□□□□ -1.16
LINC00517-201ENST00000553396 OR13C7P0DN81 318 aa7.79□□□□□ -1.16
LINC00517-201ENST00000553396 GP9P14770 177 aa7.79□□□□□ -1.16
LINC00517-201ENST00000553396 SSBP1Q04837 148 aaKnown RBP7.79□□□□□ -1.16
LINC00517-201ENST00000553396 WT1-ASQ06250 92 aa7.79□□□□□ -1.16
LINC00517-201ENST00000553396 TATDN3Q17R31 274 aa7.79□□□□□ -1.16
LINC00517-201ENST00000553396 C11orf87Q6NUJ2 197 aa7.79□□□□□ -1.16
LINC00517-201ENST00000553396 CLEC19AQ6UXS0 136 aa7.79□□□□□ -1.16
LINC00517-201ENST00000553396 OR1L8Q8NGR8 309 aa7.79□□□□□ -1.16
LINC00517-201ENST00000553396 OR13C8Q8NGS7 320 aa7.79□□□□□ -1.16
LINC00517-201ENST00000553396 TERB2Q8NHR7 220 aa7.79□□□□□ -1.16
LINC00517-201ENST00000553396 MARCH1Q8TCQ1 289 aa7.79□□□□□ -1.16
LINC00517-201ENST00000553396 EEF1AKMT3Q96AZ1 226 aa7.79□□□□□ -1.16
LINC00517-201ENST00000553396 ZNF486Q96H40 463 aaPredicted RBP7.79□□□□□ -1.16
LINC00517-201ENST00000553396 SEC22AQ96IW7 307 aa7.79□□□□□ -1.16
LINC00517-201ENST00000553396 TP53RKQ96S44 253 aa7.79□□□□□ -1.16
LINC00517-201ENST00000553396 B9D2Q9BPU9 175 aa7.79□□□□□ -1.16
LINC00517-201ENST00000553396 ZC4H2Q9NQZ6 224 aa7.79□□□□□ -1.16
LINC00517-201ENST00000553396 COPZ2Q9P299 210 aa7.79□□□□□ -1.16
LINC00517-201ENST00000553396 PRNDQ9UKY0 176 aa7.79□□□□□ -1.16
LINC00517-201ENST00000553396 LSM4Q9Y4Z0 139 aaKnown RBP7.79□□□□□ -1.16
LINC00517-201ENST00000553396 DMRT1Q9Y5R6 373 aa7.79□□□□□ -1.16
LINC00517-201ENST00000553396 C15orf61A6NNL5 157 aa7.78□□□□□ -1.16
LINC00517-201ENST00000553396 H0Y980 276 aa7.78□□□□□ -1.16
LINC00517-201ENST00000553396 CTDSPLO15194 276 aa7.78□□□□□ -1.16
LINC00517-201ENST00000553396 IGLV1-51P01701 117 aa7.78□□□□□ -1.16
LINC00517-201ENST00000553396 FGF2P09038 288 aa7.78□□□□□ -1.16
LINC00517-201ENST00000553396 AKAIN1P0CW23 69 aa7.78□□□□□ -1.16
LINC00517-201ENST00000553396 HIST1H1BP16401 226 aaKnown RBP7.78□□□□□ -1.16
LINC00517-201ENST00000553396 TNFSF8P32971 234 aa7.78□□□□□ -1.16
LINC00517-201ENST00000553396 ARL3P36405 182 aa7.78□□□□□ -1.16
LINC00517-201ENST00000553396 MECP2P51608 486 aaKnown RBP7.78□□□□□ -1.16
LINC00517-201ENST00000553396 RND3P61587 244 aa7.78□□□□□ -1.16
LINC00517-201ENST00000553396 MEF2DQ14814 521 aa7.78□□□□□ -1.16
LINC00517-201ENST00000553396 IZUMO4Q1ZYL8 232 aa7.78□□□□□ -1.16
LINC00517-201ENST00000553396 SP6Q3SY56 376 aa7.78□□□□□ -1.16
LINC00517-201ENST00000553396 THOC7Q6I9Y2 204 aaKnown RBP7.78□□□□□ -1.16
LINC00517-201ENST00000553396 IL34Q6ZMJ4 242 aa7.78□□□□□ -1.16
LINC00517-201ENST00000553396 H2BFWTQ7Z2G1 175 aa7.78□□□□□ -1.16
LINC00517-201ENST00000553396 GDPD1Q8N9F7 314 aa7.78□□□□□ -1.16
LINC00517-201ENST00000553396 OR4C16Q8NGL9 310 aa7.78□□□□□ -1.16
LINC00517-201ENST00000553396 OR4A16Q8NH70 328 aa7.78□□□□□ -1.16
LINC00517-201ENST00000553396 ZFAND1Q8TCF1 268 aa7.78□□□□□ -1.16
LINC00517-201ENST00000553396 LSM10Q969L4 123 aaKnown RBP7.78□□□□□ -1.16
LINC00517-201ENST00000553396 TSC22D3Q99576 134 aa7.78□□□□□ -1.16
LINC00517-201ENST00000553396 SRSF8Q9BRL6 282 aaKnown RBP7.78□□□□□ -1.16
LINC00517-201ENST00000553396 NXF2Q9GZY0 626 aaKnown RBP7.78□□□□□ -1.16
LINC00517-201ENST00000553396 NDUFA4L2Q9NRX3 87 aa7.78□□□□□ -1.16
LINC00517-201ENST00000553396 FAM212BQ9NTI7 297 aaPredicted RBP7.78□□□□□ -1.16
LINC00517-201ENST00000553396 RABL2AQ9UBK7 228 aaPredicted RBP7.78□□□□□ -1.16
LINC00517-201ENST00000553396 PEMTQ9UBM1 199 aa7.78□□□□□ -1.16
LINC00517-201ENST00000553396 RSL24D1Q9UHA3 163 aaKnown RBP7.78□□□□□ -1.16
LINC00517-201ENST00000553396 RABL2BQ9UNT1 228 aa7.78□□□□□ -1.16
LINC00517-201ENST00000553396 IGHV3-21A0A0B4J1V1 117 aa7.77□□□□□ -1.17
LINC00517-201ENST00000553396 C3orf85A0A1B0GTC6 90 aa7.77□□□□□ -1.17
LINC00517-201ENST00000553396 FABP12A6NFH5 140 aa7.77□□□□□ -1.17
LINC00517-201ENST00000553396 DISC1C4P0D8 188 aa7.77□□□□□ -1.17
LINC00517-201ENST00000553396 GGCTO75223 188 aaKnown RBP7.77□□□□□ -1.17
LINC00517-201ENST00000553396 OR2C1O95371 312 aa7.77□□□□□ -1.17
LINC00517-201ENST00000553396 CTSDP07339 412 aaPredicted RBP7.77□□□□□ -1.17
LINC00517-201ENST00000553396 CSN3P07498 182 aa7.77□□□□□ -1.17
LINC00517-201ENST00000553396 EDN2P20800 178 aa7.77□□□□□ -1.17
LINC00517-201ENST00000553396 PTBP1P26599 531 aaKnown RBP eCLIP7.77□□□□□ -1.17
LINC00517-201ENST00000553396 GPR183P32249 361 aa7.77□□□□□ -1.17
LINC00517-201ENST00000553396 AKR1C2P52895 323 aa7.77□□□□□ -1.17
LINC00517-201ENST00000553396 TRIM16LQ309B1 348 aa7.77□□□□□ -1.17
LINC00517-201ENST00000553396 FAM209BQ5JX69 171 aa7.77□□□□□ -1.17
LINC00517-201ENST00000553396 SLC25A24Q6NUK1 477 aa7.77□□□□□ -1.17
LINC00517-201ENST00000553396 HSD17B13Q7Z5P4 300 aaPredicted RBP7.77□□□□□ -1.17
LINC00517-201ENST00000553396 CCDC71LQ8N9Z2 235 aa7.77□□□□□ -1.17
LINC00517-201ENST00000553396 OR51S1Q8NGJ8 323 aa7.77□□□□□ -1.17
LINC00517-201ENST00000553396 OR5B3Q8NH48 314 aa7.77□□□□□ -1.17
LINC00517-201ENST00000553396 RBM38Q9H0Z9 239 aaKnown RBP7.77□□□□□ -1.17
LINC00517-201ENST00000553396 TMEM14BQ9NUH8 114 aa7.77□□□□□ -1.17
LINC00517-201ENST00000553396 FKBP11Q9NYL4 201 aa7.77□□□□□ -1.17
LINC00517-201ENST00000553396 C14orf166Q9Y224 244 aaKnown RBP7.77□□□□□ -1.17
LINC00517-201ENST00000553396 SMAD5-AS1Q9Y6J3 95 aa7.77□□□□□ -1.17
LINC00517-201ENST00000553396 ANKRD20A5PA0PJZ0 165 aa7.76□□□□□ -1.17
LINC00517-201ENST00000553396 CYB5BO43169 146 aa7.76□□□□□ -1.17
LINC00517-201ENST00000553396 GSTZ1O43708 216 aaPredicted RBP7.76□□□□□ -1.17
LINC00517-201ENST00000553396 IGKV1-5P01602 117 aa7.76□□□□□ -1.17
LINC00517-201ENST00000553396 CLEC3BP05452 202 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms